Strain Fitness in Pantoea sp. MT58 around IAI47_14675

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,094,822	+		IAI47_14665	0.76	+0.0
3,094,881	+				+0.5
3,094,881	+				-2.1
3,094,882	-				+0.9
3,094,882	-				+2.1
3,094,902	+				+2.3
3,094,902	+				+1.4
3,094,903	-				-0.9
3,094,903	-				-0.7
3,094,903	-				+0.8
3,094,903	-				+1.0
3,094,905	+				+0.8
3,094,905	+				-0.4
3,094,905	+				+0.3
3,094,905	+				-0.1
3,094,905	+				-0.5
3,094,905	+				-1.5
3,094,905	+				-1.0
3,094,905	+				+1.3
3,094,905	+				-0.8
3,094,906	-				+0.4
3,094,906	-				-0.5
3,094,906	-				+1.0
3,094,948	-				-0.4
3,094,984	-				+0.3
3,094,984	-				+0.9
3,094,987	+				-0.2
3,094,988	-				-0.5
3,094,988	-				+0.1
3,094,997	+				-0.8
3,094,997	+				+0.3
3,094,998	-				-1.0
3,094,998	-				-0.8
3,095,022	+				+0.3
3,095,022	+				-0.7
3,095,022	+				-0.2
3,095,023	-				-0.4
3,095,023	-				+2.3
3,095,023	-				+1.5
3,095,023	-				-0.2
3,095,025	+				-2.1
3,095,025	+				-0.4
3,095,025	+				+0.6
3,095,025	+				+0.3
3,095,025	+				-0.1
3,095,025	+				-0.1
3,095,025	+				-0.3
3,095,026	-				+1.1
3,095,026	-				+1.6
3,095,026	-				-1.0
3,095,026	-				-0.2
3,095,026	-				+0.0
3,095,027	-				-0.8
3,095,030	+				-1.4
3,095,030	+				+0.1
3,095,030	+				+2.1
3,095,030	+				+0.7
3,095,030	+				+0.3
3,095,031	-				-0.4
3,095,031	-				+1.8
3,095,031	-				-0.3
3,095,031	-				+1.5
3,095,031	-				+0.5
3,095,051	+				-0.3
3,095,052	-				+0.2
3,095,052	-				+1.7
3,095,052	-				-0.5
3,095,052	-				+1.6
3,095,052	-				-0.6
3,095,072	+				-1.1
3,095,072	+				+0.5
3,095,072	+				+2.3
3,095,072	+				-0.4
3,095,073	-				-0.2
3,095,132	+				-0.5
3,095,132	+				+0.2
3,095,132	+				+1.0
3,095,132	+				-0.3
3,095,132	+				-0.1
3,095,132	+				+0.1
3,095,132	+				-0.6
3,095,133	-				+0.7
3,095,133	-				-0.4
3,095,133	-				+1.3
3,095,133	-				-0.1
3,095,133	-				-0.6
3,095,133	-				-2.0
3,095,133	-				-1.1
3,095,184	+				-0.1
3,095,184	+				+0.6
3,095,185	-				-0.2
3,095,185	-				+0.4
3,095,201	+				+1.1
3,095,202	-				-0.2
3,095,202	-				-0.7
3,095,228	+				-0.6
3,095,250	+		IAI47_14670	0.11	-0.1
3,095,250	+		IAI47_14670	0.11	-0.8
3,095,251	-		IAI47_14670	0.11	+0.3
3,095,251	-		IAI47_14670	0.11	-0.4
3,095,251	-		IAI47_14670	0.11	-1.0
3,095,251	-		IAI47_14670	0.11	-0.2
3,095,251	-		IAI47_14670	0.11	+0.5
3,095,254	-		IAI47_14670	0.12	+1.9
3,095,254	-		IAI47_14670	0.12	-1.8
3,095,254	-		IAI47_14670	0.12	-0.6
3,095,272	-		IAI47_14670	0.15	-1.0
3,095,312	+		IAI47_14670	0.22	+1.0
3,095,313	-		IAI47_14670	0.22	+1.6
3,095,367	-		IAI47_14670	0.31	-0.3
3,095,384	+		IAI47_14670	0.34	-0.9
3,095,384	+		IAI47_14670	0.34	-0.4
3,095,384	+		IAI47_14670	0.34	+0.7
3,095,385	-		IAI47_14670	0.35	-0.7
3,095,394	-		IAI47_14670	0.36	-0.3
3,095,394	-		IAI47_14670	0.36	-2.5
3,095,394	-		IAI47_14670	0.36	+0.8
3,095,461	+		IAI47_14670	0.48	-1.1
3,095,461	+		IAI47_14670	0.48	-2.2
3,095,461	+		IAI47_14670	0.48	+0.6
3,095,461	+		IAI47_14670	0.48	+0.6
3,095,462	-		IAI47_14670	0.48	-3.2
3,095,462	-		IAI47_14670	0.48	+1.1
3,095,463	+		IAI47_14670	0.48	-0.0
3,095,463	+		IAI47_14670	0.48	+0.8
3,095,463	+		IAI47_14670	0.48	-2.5
3,095,463	+		IAI47_14670	0.48	+0.0
3,095,463	+		IAI47_14670	0.48	+1.9
3,095,463	+		IAI47_14670	0.48	+1.8
3,095,463	+		IAI47_14670	0.48	+0.2
3,095,463	+		IAI47_14670	0.48	-1.0
3,095,463	+		IAI47_14670	0.48	+1.3
3,095,463	+		IAI47_14670	0.48	-0.8
3,095,463	+		IAI47_14670	0.48	+0.5
3,095,463	+		IAI47_14670	0.48	+0.5
3,095,463	+		IAI47_14670	0.48	-0.0
3,095,464	-		IAI47_14670	0.48	-1.6
3,095,464	-		IAI47_14670	0.48	-0.1
3,095,464	-		IAI47_14670	0.48	-1.0
3,095,464	-		IAI47_14670	0.48	+3.4
3,095,464	-		IAI47_14670	0.48	+0.1
3,095,464	-		IAI47_14670	0.48	-0.5
3,095,464	-		IAI47_14670	0.48	-0.9
3,095,464	-		IAI47_14670	0.48	-1.3
3,095,464	-		IAI47_14670	0.48	+0.5
3,095,464	-		IAI47_14670	0.48	-1.1
3,095,464	-		IAI47_14670	0.48	+0.3
3,095,464	-		IAI47_14670	0.48	+0.7
3,095,464	-		IAI47_14670	0.48	-1.7
3,095,464	-		IAI47_14670	0.48	-2.4
3,095,464	-		IAI47_14670	0.48	-0.3
3,095,475	+		IAI47_14670	0.50	+0.4
3,095,475	+		IAI47_14670	0.50	+0.2
3,095,476	-		IAI47_14670	0.50	-0.4
3,095,476	-		IAI47_14670	0.50	-0.5
3,095,505	+		IAI47_14670	0.55	+1.5
3,095,515	+		IAI47_14670	0.57	-0.7
3,095,515	+		IAI47_14670	0.57	+0.8
3,095,515	+		IAI47_14670	0.57	-0.3
3,095,515	+		IAI47_14670	0.57	+0.7
3,095,515	+		IAI47_14670	0.57	+0.5
3,095,516	-		IAI47_14670	0.57	-0.3
3,095,516	-		IAI47_14670	0.57	-0.9
3,095,516	-		IAI47_14670	0.57	+1.3
3,095,516	-		IAI47_14670	0.57	-2.3
3,095,516	-		IAI47_14670	0.57	-0.8
3,095,516	-		IAI47_14670	0.57	+0.4
3,095,516	-		IAI47_14670	0.57	-0.7
3,095,516	-		IAI47_14670	0.57	-0.1
3,095,547	+		IAI47_14670	0.63	+1.8
3,095,547	+		IAI47_14670	0.63	+1.3
3,095,548	-		IAI47_14670	0.63	-0.1
3,095,548	-		IAI47_14670	0.63	-0.1
3,095,548	-		IAI47_14670	0.63	-0.4
3,095,548	-		IAI47_14670	0.63	-0.1
3,095,548	-		IAI47_14670	0.63	-0.2
3,095,548	-		IAI47_14670	0.63	-1.1
3,095,548	-		IAI47_14670	0.63	-0.5
3,095,548	-		IAI47_14670	0.63	+1.2
3,095,548	-		IAI47_14670	0.63	-0.3
3,095,548	-		IAI47_14670	0.63	-1.3
3,095,548	-		IAI47_14670	0.63	-0.9
3,095,610	+		IAI47_14670	0.73	-1.7
3,095,629	+		IAI47_14670	0.77	+0.1
3,095,629	+		IAI47_14670	0.77	+0.6
3,095,630	-		IAI47_14670	0.77	+1.9
3,095,630	-		IAI47_14670	0.77	-1.8
3,095,630	-		IAI47_14670	0.77	-1.2
3,095,636	+		IAI47_14670	0.78	+0.6
3,095,636	+		IAI47_14670	0.78	+0.5
3,095,636	+		IAI47_14670	0.78	+0.3
3,095,637	-		IAI47_14670	0.78	-0.5
3,095,637	-		IAI47_14670	0.78	-2.1
3,095,637	-		IAI47_14670	0.78	-0.1
3,095,637	-		IAI47_14670	0.78	-2.4
3,095,637	-		IAI47_14670	0.78	-1.2
3,095,637	-		IAI47_14670	0.78	-0.7
3,095,637	-		IAI47_14670	0.78	-2.6
3,095,658	+		IAI47_14670	0.82	+1.3
3,095,683	-		IAI47_14670	0.86	-2.1
3,095,762	-				-1.3
3,095,762	-				-0.7
3,095,762	-				-1.9
3,095,805	+				+0.3
3,095,830	+				-0.6
3,095,830	+				-1.5
3,095,830	+				-2.2
3,095,831	-				-0.6
3,095,831	-				-1.5
3,095,831	-				-1.1
3,095,865	-				-1.4
3,095,865	-				-1.5
3,095,954	+				+0.6
3,095,954	+				-1.6
3,095,992	+		IAI47_14675	0.11	-1.6
3,095,992	+		IAI47_14675	0.11	-1.0
3,095,992	+		IAI47_14675	0.11	-1.1
3,095,992	+		IAI47_14675	0.11	+0.2
3,095,993	-		IAI47_14675	0.12	-1.2
3,095,993	-		IAI47_14675	0.12	-2.7
3,095,993	-		IAI47_14675	0.12	-1.2
3,096,000	+		IAI47_14675	0.12	+0.0
3,096,001	-		IAI47_14675	0.12	-1.0
3,096,031	+		IAI47_14675	0.14	+1.2
3,096,032	-		IAI47_14675	0.14	+0.1
3,096,033	+		IAI47_14675	0.14	+0.3
3,096,033	+		IAI47_14675	0.14	-2.4
3,096,033	+		IAI47_14675	0.14	-2.9
3,096,192	+		IAI47_14675	0.25	-0.1
3,096,192	+		IAI47_14675	0.25	-0.3
3,096,193	-		IAI47_14675	0.25	-1.9
3,096,193	-		IAI47_14675	0.25	-1.5
3,096,272	-		IAI47_14675	0.30	-1.5
3,096,272	-		IAI47_14675	0.30	-0.0
3,096,325	+		IAI47_14675	0.34	-2.0
3,096,326	-		IAI47_14675	0.34	+0.3
3,096,347	-		IAI47_14675	0.35	-0.6
3,096,379	-		IAI47_14675	0.37	-1.1
3,096,382	-		IAI47_14675	0.38	-1.2
3,096,423	+		IAI47_14675	0.40	-2.1
3,096,463	-		IAI47_14675	0.43	-1.7
3,096,480	+		IAI47_14675	0.44	-2.1
3,096,480	+		IAI47_14675	0.44	-1.8
3,096,481	-		IAI47_14675	0.44	+0.3
3,096,481	-		IAI47_14675	0.44	-0.4
3,096,501	+		IAI47_14675	0.46	-2.6
3,096,510	+		IAI47_14675	0.46	-1.4
3,096,510	+		IAI47_14675	0.46	-0.9
3,096,511	-		IAI47_14675	0.46	-0.9
3,096,517	+		IAI47_14675	0.47	-0.8
3,096,517	+		IAI47_14675	0.47	+0.2
3,096,649	+		IAI47_14675	0.56	+0.4
3,096,650	-		IAI47_14675	0.56	+1.4
3,096,650	-		IAI47_14675	0.56	-0.3
3,096,771	+		IAI47_14675	0.64	-0.1
3,096,772	-		IAI47_14675	0.64	+0.6
3,096,839	+		IAI47_14675	0.68	-0.8
3,096,839	+		IAI47_14675	0.68	-0.2
3,096,840	-		IAI47_14675	0.68	+0.0
3,096,840	-		IAI47_14675	0.68	+0.4
3,096,840	-		IAI47_14675	0.68	-0.7
3,096,840	-		IAI47_14675	0.68	+0.4
3,096,916	+		IAI47_14675	0.73	-0.4
3,096,916	+		IAI47_14675	0.73	-0.2
3,096,916	+		IAI47_14675	0.73	+0.1
3,096,916	+		IAI47_14675	0.73	-0.3
3,096,916	+		IAI47_14675	0.73	-0.4
3,096,916	+		IAI47_14675	0.73	+0.0
3,096,916	+		IAI47_14675	0.73	-0.5
3,096,917	-		IAI47_14675	0.74	+1.3
3,096,917	-		IAI47_14675	0.74	-1.9
3,096,917	-		IAI47_14675	0.74	-0.7
3,096,917	-		IAI47_14675	0.74	-0.3
3,096,917	-		IAI47_14675	0.74	-0.1
3,096,917	-		IAI47_14675	0.74	-1.4
3,096,917	-		IAI47_14675	0.74	-1.6
3,096,971	-		IAI47_14675	0.77	-3.1
3,096,978	+		IAI47_14675	0.78	-0.5
3,096,979	-		IAI47_14675	0.78	-1.9
3,096,983	+		IAI47_14675	0.78	-1.0
3,096,983	+		IAI47_14675	0.78	-2.0
3,096,983	+		IAI47_14675	0.78	+1.7
3,096,984	-		IAI47_14675	0.78	-0.6
3,097,007	+		IAI47_14675	0.80	-0.7
3,097,007	+		IAI47_14675	0.80	-0.3
3,097,008	-		IAI47_14675	0.80	-0.9
3,097,008	-		IAI47_14675	0.80	-2.9
3,097,075	+		IAI47_14675	0.84	-2.0
3,097,075	+		IAI47_14675	0.84	-0.5
3,097,075	+		IAI47_14675	0.84	+1.4
3,097,075	+		IAI47_14675	0.84	+1.2
3,097,075	+		IAI47_14675	0.84	-0.4
3,097,075	+		IAI47_14675	0.84	+0.2
3,097,075	+		IAI47_14675	0.84	+0.3
3,097,075	+		IAI47_14675	0.84	-0.5
3,097,075	+		IAI47_14675	0.84	-1.2
3,097,076	-		IAI47_14675	0.84	+0.2
3,097,076	-		IAI47_14675	0.84	+1.2
3,097,076	-		IAI47_14675	0.84	-1.1
3,097,076	-		IAI47_14675	0.84	-1.0
3,097,076	-		IAI47_14675	0.84	+0.2
3,097,078	+		IAI47_14675	0.84	+1.0
3,097,078	+		IAI47_14675	0.84	+0.4
3,097,078	+		IAI47_14675	0.84	-0.9
3,097,079	-		IAI47_14675	0.84	+0.5
3,097,079	-		IAI47_14675	0.84	+1.2
3,097,101	+		IAI47_14675	0.86	+0.4
3,097,102	-		IAI47_14675	0.86	-0.6
3,097,102	-		IAI47_14675	0.86	-0.4
3,097,148	+		IAI47_14675	0.89	+0.0
3,097,292	+				+1.1
3,097,293	-				-0.5
3,097,309	+				-0.8
3,097,309	+				-0.6
3,097,309	+				+2.1
3,097,309	+				-0.0
3,097,309	+				+0.8
3,097,310	-				-0.3
3,097,310	-				-0.4
3,097,310	-				+0.8
3,097,310	-				+0.2
3,097,310	-				+1.3
3,097,314	-				-0.1
3,097,322	+				+1.6
3,097,322	+				-0.3
3,097,342	+				-1.1
3,097,343	-				+0.2
3,097,343	-				+0.9
3,097,347	+				+0.0
3,097,348	-				-0.1
3,097,361	-				+0.3
3,097,361	-				+1.3
3,097,376	-				+1.2
3,097,388	+				+0.9
3,097,388	+				+1.7
3,097,402	-				+0.6
3,097,407	+				-0.8
3,097,407	+				-1.2
3,097,407	+				+0.8
3,097,407	+				-0.7
3,097,408	-				+0.8
3,097,408	-				-1.5
3,097,408	-				-2.2
3,097,436	+				+1.3
3,097,454	+				-0.3
3,097,459	+				+2.7
3,097,460	-				+0.0
3,097,460	-				+0.3
3,097,510	+				+2.0
3,097,511	-				+0.3
3,097,516	+				+0.0
3,097,517	-				-2.6
3,097,550	+				+1.2
3,097,551	-				+0.3
3,097,571	+				-1.9
3,097,572	-				+0.0
3,097,572	-				+0.6
3,097,601	+				+0.5
3,097,601	+				-0.1
3,097,635	+				+1.6
3,097,636	-				-0.3
3,097,636	-				+1.4
3,097,655	+				+0.0
3,097,655	+				+0.5
3,097,656	-				-0.0
3,097,670	+				+0.8
3,097,690	-				-1.7
3,097,718	+				+0.8
3,097,718	+				+0.6
3,097,728	+				-0.7
3,097,728	+				+0.7
3,097,754	-				+1.3
3,097,767	+				+0.9
3,097,767	+				+0.6
3,097,771	+				+0.1
3,097,777	-				-0.9
3,097,799	+				+0.8
3,097,814	+				+1.0
3,097,815	-				+1.6
3,097,844	+				-0.2
3,097,844	+				-0.5
3,097,845	-				+2.0
3,097,886	+		IAI47_14680	0.14	+0.6
3,097,987	+		IAI47_14680	0.25	+0.2
3,097,987	+		IAI47_14680	0.25	-0.7
3,097,987	+		IAI47_14680	0.25	+1.6
3,097,988	-		IAI47_14680	0.25	+4.4
3,097,995	+		IAI47_14680	0.26	-0.3
3,097,996	-		IAI47_14680	0.26	+1.0
3,098,010	+		IAI47_14680	0.27	+0.9
3,098,011	-		IAI47_14680	0.28	+0.8
3,098,055	+		IAI47_14680	0.32	+0.1
3,098,055	+		IAI47_14680	0.32	+0.1
3,098,056	-		IAI47_14680	0.32	+1.0
3,098,056	-		IAI47_14680	0.32	-0.6
3,098,179	+		IAI47_14680	0.46	-1.2
3,098,251	-		IAI47_14680	0.53	-0.1
3,098,251	-		IAI47_14680	0.53	+0.3
3,098,305	+		IAI47_14680	0.59	-1.6
3,098,306	-		IAI47_14680	0.59	+1.8