Strain Fitness in Pantoea sp. MT58 around IAI47_13500

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,862,273	-		IAI47_13495	0.51	-1.7
2,862,273	-		IAI47_13495	0.51	-2.8
2,862,273	-		IAI47_13495	0.51	-1.1
2,862,341	+		IAI47_13495	0.58	-0.4
2,862,356	+		IAI47_13495	0.59	-0.4
2,862,356	+		IAI47_13495	0.59	+0.8
2,862,356	+		IAI47_13495	0.59	+0.5
2,862,357	-		IAI47_13495	0.60	-0.2
2,862,398	+		IAI47_13495	0.64	+1.0
2,862,398	+		IAI47_13495	0.64	-0.0
2,862,398	+		IAI47_13495	0.64	+0.1
2,862,399	-		IAI47_13495	0.64	-1.1
2,862,409	-		IAI47_13495	0.65	-0.8
2,862,482	+		IAI47_13495	0.72	-0.3
2,862,483	-		IAI47_13495	0.72	-0.2
2,862,652	+		IAI47_13495	0.89	+0.0
2,862,652	+		IAI47_13495	0.89	-1.9
2,862,653	-		IAI47_13495	0.90	-2.7
2,862,670	+				-1.2
2,862,670	+				-2.5
2,862,670	+				-2.7
2,862,670	+				+0.8
2,862,670	+				-1.3
2,862,670	+				-0.8
2,862,670	+				-0.6
2,862,671	-				+0.1
2,862,671	-				+0.1
2,862,671	-				+0.0
2,862,671	-				-0.4
2,862,671	-				-1.0
2,862,674	+				+0.8
2,862,674	+				-0.9
2,862,674	+				+0.3
2,862,675	-				-0.1
2,862,675	-				+1.3
2,862,686	+				-0.9
2,862,686	+				+1.5
2,862,687	-				-0.5
2,862,716	-				+0.9
2,862,716	-				-0.5
2,862,718	+				-0.1
2,862,718	+				+0.1
2,862,718	+				-1.1
2,862,719	-				-1.0
2,862,725	+				+0.6
2,862,725	+				+0.4
2,862,733	+				+0.1
2,862,733	+				+0.1
2,862,734	-				-0.2
2,862,734	-				-0.2
2,862,819	+				+0.3
2,862,819	+				+0.5
2,862,847	+				-1.4
2,862,847	+				-0.9
2,862,847	+				+1.0
2,862,848	-				+2.3
2,862,848	-				+0.5
2,862,848	-				+0.8
2,862,848	-				+0.6
2,862,848	-				-0.3
2,862,848	-				-0.6
2,862,867	+				-0.4
2,862,893	-				+0.4
2,862,904	+				+2.3
2,862,905	-				+1.9
2,862,943	+				+0.2
2,862,943	+				-1.4
2,862,943	+				-0.1
2,862,945	+				-0.9
2,862,945	+				-1.9
2,862,945	+				+0.5
2,862,945	+				-1.4
2,862,947	+				+1.9
2,862,947	+				+0.5
2,862,947	+				+0.1
2,862,947	+				-0.6
2,862,947	+				+0.9
2,862,948	-				+0.2
2,862,948	-				+0.9
2,862,948	-				+0.9
2,862,948	-				+1.2
2,862,953	+				-2.2
2,862,953	+				+0.2
2,862,953	+				-0.4
2,862,954	-				+0.3
2,862,955	+				-0.3
2,862,955	+				+0.8
2,862,956	-				-0.1
2,862,956	-				-0.6
2,862,956	-				+1.4
2,862,956	-				+0.6
2,862,959	+				+0.2
2,862,960	-				+0.7
2,862,981	-				+0.8
2,862,991	+				+0.4
2,862,992	-				+1.1
2,863,046	+				+1.5
2,863,046	+				+1.4
2,863,073	-				-0.0
2,863,082	+				+0.1
2,863,082	+				+0.6
2,863,082	+				-1.3
2,863,082	+				-0.4
2,863,082	+				+0.4
2,863,083	-				-0.2
2,863,083	-				+0.9
2,863,142	-				-1.4
2,863,190	+		IAI47_13500	0.12	+0.6
2,863,271	+		IAI47_13500	0.20	+0.8
2,863,271	+		IAI47_13500	0.20	-0.5
2,863,271	+		IAI47_13500	0.20	+0.9
2,863,271	+		IAI47_13500	0.20	-0.8
2,863,271	+		IAI47_13500	0.20	+0.9
2,863,271	+		IAI47_13500	0.20	-0.6
2,863,272	-		IAI47_13500	0.20	+1.9
2,863,272	-		IAI47_13500	0.20	-2.1
2,863,272	-		IAI47_13500	0.20	+0.2
2,863,272	-		IAI47_13500	0.20	+0.8
2,863,326	+		IAI47_13500	0.26	+0.9
2,863,326	+		IAI47_13500	0.26	+0.2
2,863,405	+		IAI47_13500	0.35	+0.1
2,863,405	+		IAI47_13500	0.35	+1.2
2,863,405	+		IAI47_13500	0.35	+1.6
2,863,405	+		IAI47_13500	0.35	+0.5
2,863,405	+		IAI47_13500	0.35	-0.1
2,863,406	-		IAI47_13500	0.35	+0.6
2,863,406	-		IAI47_13500	0.35	-0.6
2,863,406	-		IAI47_13500	0.35	+0.6
2,863,424	+		IAI47_13500	0.37	+1.8
2,863,425	-		IAI47_13500	0.37	-0.2
2,863,427	+		IAI47_13500	0.37	+0.0
2,863,428	-		IAI47_13500	0.37	-0.8
2,863,428	-		IAI47_13500	0.37	+0.6
2,863,514	+		IAI47_13500	0.47	-0.2
2,863,514	+		IAI47_13500	0.47	-0.4
2,863,514	+		IAI47_13500	0.47	+0.4
2,863,515	-		IAI47_13500	0.47	-2.2
2,863,515	-		IAI47_13500	0.47	-0.4
2,863,515	-		IAI47_13500	0.47	+1.1
2,863,515	-		IAI47_13500	0.47	+0.6
2,863,515	-		IAI47_13500	0.47	+0.4
2,863,517	+		IAI47_13500	0.47	+0.2
2,863,517	+		IAI47_13500	0.47	-0.4
2,863,518	-		IAI47_13500	0.47	+1.6
2,863,518	-		IAI47_13500	0.47	-0.4
2,863,518	-		IAI47_13500	0.47	+1.1
2,863,518	-		IAI47_13500	0.47	+0.3
2,863,524	+		IAI47_13500	0.48	+0.5
2,863,524	+		IAI47_13500	0.48	+1.0
2,863,618	+		IAI47_13500	0.58	+2.5
2,863,618	+		IAI47_13500	0.58	+2.3
2,863,619	-		IAI47_13500	0.58	+1.4
2,863,619	-		IAI47_13500	0.58	+0.6
2,863,659	+		IAI47_13500	0.62	+0.3
2,863,793	+		IAI47_13500	0.77	+0.3
2,863,794	-		IAI47_13500	0.77	+1.3
2,863,815	+		IAI47_13500	0.79	+0.6
2,863,815	+		IAI47_13500	0.79	+1.9
2,863,815	+		IAI47_13500	0.79	-0.8
2,863,815	+		IAI47_13500	0.79	+0.2
2,863,815	+		IAI47_13500	0.79	+0.3
2,863,815	+		IAI47_13500	0.79	+0.2
2,863,815	+		IAI47_13500	0.79	+1.4
2,863,815	+		IAI47_13500	0.79	+0.3
2,863,815	+		IAI47_13500	0.79	+0.4
2,863,816	-		IAI47_13500	0.79	+0.9
2,863,816	-		IAI47_13500	0.79	+1.7
2,863,816	-		IAI47_13500	0.79	+0.8
2,863,816	-		IAI47_13500	0.79	+0.3
2,863,926	+				+0.6
2,863,927	-				-0.8
2,863,945	+				+0.3
2,863,945	+				+0.8
2,863,945	+				+0.1
2,863,945	+				-0.1
2,863,946	-				-0.4
2,863,946	-				+1.7
2,863,948	+				+0.3
2,863,948	+				-0.0
2,863,949	-				+2.2
2,863,949	-				+0.4
2,863,992	-				-0.4
2,864,004	+				-0.3
2,864,132	-				+1.5
2,864,203	+		IAI47_13505	0.11	+2.1
2,864,204	-		IAI47_13505	0.11	+1.2
2,864,204	-		IAI47_13505	0.11	-0.3
2,864,204	-		IAI47_13505	0.11	-2.5
2,864,211	+		IAI47_13505	0.11	+1.0
2,864,211	+		IAI47_13505	0.11	-0.2
2,864,212	-		IAI47_13505	0.11	-0.3
2,864,226	+		IAI47_13505	0.12	+0.6
2,864,226	+		IAI47_13505	0.12	-0.9
2,864,226	+		IAI47_13505	0.12	-0.1
2,864,227	-		IAI47_13505	0.12	-0.4
2,864,281	+		IAI47_13505	0.14	+0.3
2,864,281	+		IAI47_13505	0.14	+0.7
2,864,282	-		IAI47_13505	0.14	-0.7
2,864,282	-		IAI47_13505	0.14	+1.6
2,864,340	+		IAI47_13505	0.17	+0.4
2,864,367	+		IAI47_13505	0.19	-0.6
2,864,379	+		IAI47_13505	0.19	-0.4
2,864,379	+		IAI47_13505	0.19	+1.1
2,864,380	-		IAI47_13505	0.19	-0.4
2,864,380	-		IAI47_13505	0.19	-1.2
2,864,380	-		IAI47_13505	0.19	-0.4
2,864,497	+		IAI47_13505	0.25	+0.5
2,864,497	+		IAI47_13505	0.25	+0.5
2,864,498	-		IAI47_13505	0.25	+0.1
2,864,498	-		IAI47_13505	0.25	+0.1
2,864,498	-		IAI47_13505	0.25	-0.8
2,864,498	-		IAI47_13505	0.25	+0.8
2,864,536	+		IAI47_13505	0.27	-1.3
2,864,536	+		IAI47_13505	0.27	-0.2
2,864,536	+		IAI47_13505	0.27	+0.6
2,864,536	+		IAI47_13505	0.27	+0.8
2,864,536	+		IAI47_13505	0.27	-0.5
2,864,537	-		IAI47_13505	0.27	-1.1
2,864,537	-		IAI47_13505	0.27	-1.3
2,864,537	-		IAI47_13505	0.27	-1.7
2,864,537	-		IAI47_13505	0.27	-2.2
2,864,537	-		IAI47_13505	0.27	+0.3
2,864,537	-		IAI47_13505	0.27	+0.8
2,864,537	-		IAI47_13505	0.27	+0.0
2,864,547	+		IAI47_13505	0.28	+1.0
2,864,548	-		IAI47_13505	0.28	-0.2
2,864,556	+		IAI47_13505	0.28	-0.7
2,864,557	-		IAI47_13505	0.28	+1.1
2,864,588	+		IAI47_13505	0.30	+0.0
2,864,588	+		IAI47_13505	0.30	-1.3
2,864,588	+		IAI47_13505	0.30	-1.3
2,864,588	+		IAI47_13505	0.30	-0.2
2,864,588	+		IAI47_13505	0.30	+0.7
2,864,766	+		IAI47_13505	0.38	+0.1
2,864,767	-		IAI47_13505	0.38	+0.3
2,864,773	+		IAI47_13505	0.39	+0.5
2,864,773	+		IAI47_13505	0.39	-0.4
2,864,773	+		IAI47_13505	0.39	-1.2
2,864,773	+		IAI47_13505	0.39	-0.7
2,864,773	+		IAI47_13505	0.39	+0.0
2,864,773	+		IAI47_13505	0.39	+0.2
2,864,773	+		IAI47_13505	0.39	+1.4
2,864,774	-		IAI47_13505	0.39	+1.3
2,864,774	-		IAI47_13505	0.39	-1.0
2,864,774	-		IAI47_13505	0.39	+1.8
2,864,774	-		IAI47_13505	0.39	+0.8
2,864,774	-		IAI47_13505	0.39	+0.6
2,864,774	-		IAI47_13505	0.39	-0.3
2,864,774	-		IAI47_13505	0.39	-0.2
2,864,816	+		IAI47_13505	0.41	-0.9
2,864,816	+		IAI47_13505	0.41	+1.2
2,864,816	+		IAI47_13505	0.41	-1.7
2,864,816	+		IAI47_13505	0.41	+0.7
2,864,816	+		IAI47_13505	0.41	-0.3
2,864,816	+		IAI47_13505	0.41	+1.3
2,864,817	-		IAI47_13505	0.41	-1.2
2,864,817	-		IAI47_13505	0.41	+0.3
2,864,840	+		IAI47_13505	0.42	-0.2
2,864,840	+		IAI47_13505	0.42	-0.7
2,864,840	+		IAI47_13505	0.42	-0.5
2,864,840	+		IAI47_13505	0.42	-0.5
2,864,840	+		IAI47_13505	0.42	-0.9
2,864,840	+		IAI47_13505	0.42	-1.2
2,864,840	+		IAI47_13505	0.42	-1.1
2,864,840	+		IAI47_13505	0.42	+0.2
2,864,840	+		IAI47_13505	0.42	-0.6
2,864,840	+		IAI47_13505	0.42	-0.1
2,864,840	+		IAI47_13505	0.42	-0.5
2,864,840	+		IAI47_13505	0.42	+0.9
2,864,840	+		IAI47_13505	0.42	+2.4
2,864,840	+		IAI47_13505	0.42	+0.5
2,864,841	-		IAI47_13505	0.42	-0.5
2,864,841	-		IAI47_13505	0.42	-0.5
2,864,841	-		IAI47_13505	0.42	+0.5
2,864,841	-		IAI47_13505	0.42	-0.7
2,864,841	-		IAI47_13505	0.42	-0.3
2,864,841	-		IAI47_13505	0.42	+0.5
2,864,841	-		IAI47_13505	0.42	-0.7
2,864,841	-		IAI47_13505	0.42	+0.3
2,864,841	-		IAI47_13505	0.42	+0.4
2,864,841	-		IAI47_13505	0.42	-0.2
2,864,921	+		IAI47_13505	0.46	+0.7
2,864,921	+		IAI47_13505	0.46	-0.2
2,864,960	+		IAI47_13505	0.48	-0.5
2,864,960	+		IAI47_13505	0.48	-1.4
2,864,960	+		IAI47_13505	0.48	-0.3
2,864,960	+		IAI47_13505	0.48	+0.4
2,864,960	+		IAI47_13505	0.48	+0.6
2,864,960	+		IAI47_13505	0.48	+0.4
2,864,960	+		IAI47_13505	0.48	+0.6
2,864,961	-		IAI47_13505	0.48	-0.6
2,864,961	-		IAI47_13505	0.48	-1.2
2,864,961	-		IAI47_13505	0.48	-0.3
2,865,004	+		IAI47_13505	0.50	+1.0
2,865,005	-		IAI47_13505	0.50	-0.8
2,865,005	-		IAI47_13505	0.50	-1.4