Strain Fitness in Pantoea sp. MT58 around IAI47_07190

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,517,276	+		IAI47_07185	0.21	+1.2
1,517,277	-		IAI47_07185	0.21	-1.3
1,517,277	-		IAI47_07185	0.21	-0.2
1,517,296	-		IAI47_07185	0.23	-0.1
1,517,318	-		IAI47_07185	0.25	-0.1
1,517,342	+		IAI47_07185	0.27	-0.4
1,517,343	-		IAI47_07185	0.27	+1.6
1,517,343	-		IAI47_07185	0.27	+0.7
1,517,343	-		IAI47_07185	0.27	+1.4
1,517,489	-		IAI47_07185	0.41	+0.5
1,517,563	+		IAI47_07185	0.48	+0.9
1,517,563	+		IAI47_07185	0.48	-1.8
1,517,563	+		IAI47_07185	0.48	-1.1
1,517,564	-		IAI47_07185	0.48	+0.2
1,517,683	+		IAI47_07185	0.59	-0.0
1,517,805	+		IAI47_07185	0.71	+3.0
1,517,806	-		IAI47_07185	0.71	+0.8
1,517,961	+		IAI47_07185	0.85	-1.2
1,517,961	+		IAI47_07185	0.85	+0.7
1,517,961	+		IAI47_07185	0.85	-0.3
1,517,961	+		IAI47_07185	0.85	+0.2
1,517,961	+		IAI47_07185	0.85	+0.5
1,517,962	-		IAI47_07185	0.86	-0.1
1,517,969	+		IAI47_07185	0.86	+0.9
1,517,969	+		IAI47_07185	0.86	-0.2
1,517,969	+		IAI47_07185	0.86	-0.3
1,517,969	+		IAI47_07185	0.86	+0.1
1,517,969	+		IAI47_07185	0.86	+1.6
1,517,970	-		IAI47_07185	0.86	-0.7
1,517,970	-		IAI47_07185	0.86	-2.7
1,517,970	-		IAI47_07185	0.86	+0.7
1,517,970	-		IAI47_07185	0.86	-0.7
1,517,970	-		IAI47_07185	0.86	-1.1
1,518,037	+				+0.2
1,518,038	-				-0.6
1,518,059	+				-0.0
1,518,059	+				+1.3
1,518,060	-				+0.2
1,518,060	-				-0.7
1,518,130	-				-1.2
1,518,146	-				+1.0
1,518,146	-				-2.0
1,518,146	-				-0.3
1,518,261	+				+1.7
1,518,261	+				+0.3
1,518,262	-				-0.6
1,518,326	+				+0.1
1,518,342	-		IAI47_07190	0.11	+0.9
1,518,362	-		IAI47_07190	0.13	-1.2
1,518,387	+		IAI47_07190	0.16	-1.6
1,518,388	-		IAI47_07190	0.16	-1.7
1,518,391	+		IAI47_07190	0.16	-1.0
1,518,391	+		IAI47_07190	0.16	-1.4
1,518,391	+		IAI47_07190	0.16	-2.4
1,518,391	+		IAI47_07190	0.16	+0.1
1,518,391	+		IAI47_07190	0.16	-0.2
1,518,391	+		IAI47_07190	0.16	-0.7
1,518,391	+		IAI47_07190	0.16	-1.0
1,518,391	+		IAI47_07190	0.16	-0.1
1,518,392	-		IAI47_07190	0.16	+0.1
1,518,392	-		IAI47_07190	0.16	+1.3
1,518,392	-		IAI47_07190	0.16	+1.3
1,518,392	-		IAI47_07190	0.16	-0.5
1,518,392	-		IAI47_07190	0.16	-1.1
1,518,392	-		IAI47_07190	0.16	+0.5
1,518,392	-		IAI47_07190	0.16	+1.1
1,518,465	+		IAI47_07190	0.24	+0.8
1,518,465	+		IAI47_07190	0.24	+1.4
1,518,513	-		IAI47_07190	0.29	-0.2
1,518,513	-		IAI47_07190	0.29	+0.2
1,518,597	-		IAI47_07190	0.38	+0.3
1,518,646	+		IAI47_07190	0.44	-2.0
1,518,720	+		IAI47_07190	0.52	+0.1
1,518,720	+		IAI47_07190	0.52	+0.9
1,518,720	+		IAI47_07190	0.52	-0.6
1,518,720	+		IAI47_07190	0.52	+1.8
1,518,721	-		IAI47_07190	0.52	-1.2
1,518,721	-		IAI47_07190	0.52	-1.5
1,518,722	+		IAI47_07190	0.52	-0.8
1,518,722	+		IAI47_07190	0.52	-1.2
1,518,722	+		IAI47_07190	0.52	+0.5
1,518,722	+		IAI47_07190	0.52	-0.3
1,518,723	-		IAI47_07190	0.52	+1.1
1,518,788	-		IAI47_07190	0.59	+0.3
1,518,809	-		IAI47_07190	0.62	+0.5
1,518,830	+		IAI47_07190	0.64	+0.3
1,518,830	+		IAI47_07190	0.64	-1.7
1,518,830	+		IAI47_07190	0.64	-0.8
1,518,830	+		IAI47_07190	0.64	-0.3
1,518,831	-		IAI47_07190	0.64	-2.1
1,518,831	-		IAI47_07190	0.64	-2.5
1,518,831	-		IAI47_07190	0.64	-1.7
1,518,831	-		IAI47_07190	0.64	+1.9
1,518,831	-		IAI47_07190	0.64	-1.7
1,518,947	-		IAI47_07190	0.77	+0.5
1,518,957	+		IAI47_07190	0.78	+3.1
1,518,957	+		IAI47_07190	0.78	-1.3
1,518,957	+		IAI47_07190	0.78	-0.3
1,518,957	+		IAI47_07190	0.78	+0.0
1,518,958	-		IAI47_07190	0.78	+0.0
1,518,958	-		IAI47_07190	0.78	-0.5
1,518,958	-		IAI47_07190	0.78	+0.3
1,518,958	-		IAI47_07190	0.78	-1.7
1,519,025	+		IAI47_07190	0.85	-1.1
1,519,025	+		IAI47_07190	0.85	+0.2
1,519,026	-		IAI47_07190	0.85	+0.5
1,519,026	-		IAI47_07190	0.85	+1.0
1,519,026	-		IAI47_07190	0.85	+0.4
1,519,026	-		IAI47_07190	0.85	-2.2
1,519,026	-		IAI47_07190	0.85	-0.3
1,519,028	+		IAI47_07190	0.86	+0.1
1,519,028	+		IAI47_07190	0.86	+0.1
1,519,056	+		IAI47_07190	0.89	+0.0
1,519,070	+				-1.6
1,519,070	+				+0.6
1,519,120	-				+1.3
1,519,120	-				-0.1
1,519,153	+				+0.3
1,519,153	+				+0.9
1,519,153	+				+1.0
1,519,154	-				-0.2
1,519,154	-				-0.7
1,519,154	-				-2.3
1,519,154	-				+0.2
1,519,154	-				-0.8
1,519,174	-				-1.7
1,519,174	-				+1.4
1,519,187	-				-0.2
1,519,191	+				+0.5
1,519,191	+				-1.0
1,519,191	+				+0.4
1,519,191	+				-0.7
1,519,192	-				+1.0
1,519,192	-				-0.2
1,519,192	-				+0.3
1,519,192	-				-0.6
1,519,211	+				-2.6
1,519,211	+				-0.1
1,519,211	+				+1.1
1,519,212	-				+0.2
1,519,220	+				-1.0
1,519,220	+				+0.6
1,519,220	+				-1.9
1,519,220	+				-1.1
1,519,221	-				-0.9
1,519,221	-				+0.8
1,519,221	-				-1.9
1,519,221	-				+1.1
1,519,221	-				+1.0
1,519,221	-				-0.4
1,519,248	+				+0.9
1,519,248	+				-0.4
1,519,249	-				+0.3
1,519,249	-				+0.2
1,519,314	-				+1.2
1,519,322	-				-0.2
1,519,334	+				+0.2
1,519,334	+				-0.2
1,519,334	+				+0.4
1,519,339	+				-1.3
1,519,396	+				-0.8
1,519,396	+				-0.8
1,519,397	-				-0.7
1,519,436	+		IAI47_07195	0.13	-1.0
1,519,437	-		IAI47_07195	0.13	-1.0
1,519,485	+		IAI47_07195	0.19	+1.2
1,519,485	+		IAI47_07195	0.19	+0.3
1,519,485	+		IAI47_07195	0.19	-0.3
1,519,485	+		IAI47_07195	0.19	-0.5
1,519,485	+		IAI47_07195	0.19	+0.8
1,519,485	+		IAI47_07195	0.19	+0.7
1,519,486	-		IAI47_07195	0.19	+1.4
1,519,490	+		IAI47_07195	0.20	+0.7
1,519,491	-		IAI47_07195	0.20	-0.2
1,519,491	-		IAI47_07195	0.20	+1.5
1,519,491	-		IAI47_07195	0.20	-0.3
1,519,491	-		IAI47_07195	0.20	+0.4
1,519,491	-		IAI47_07195	0.20	-0.5
1,519,491	-		IAI47_07195	0.20	-0.7
1,519,491	-		IAI47_07195	0.20	-0.4
1,519,491	-		IAI47_07195	0.20	+0.1
1,519,491	-		IAI47_07195	0.20	+0.1
1,519,495	-		IAI47_07195	0.20	+0.4
1,519,574	+		IAI47_07195	0.30	+0.5
1,519,574	+		IAI47_07195	0.30	-1.7
1,519,575	-		IAI47_07195	0.31	+0.2
1,519,754	+		IAI47_07195	0.54	-0.8
1,519,754	+		IAI47_07195	0.54	+0.7
1,519,755	-		IAI47_07195	0.54	+2.5
1,519,755	-		IAI47_07195	0.54	+0.7
1,519,757	-		IAI47_07195	0.54	+3.1
1,519,771	+		IAI47_07195	0.56	-0.2
1,519,847	+		IAI47_07195	0.66	+2.5
1,519,847	+		IAI47_07195	0.66	-1.3
1,519,847	+		IAI47_07195	0.66	+1.2
1,519,847	+		IAI47_07195	0.66	-1.0
1,519,847	+		IAI47_07195	0.66	+2.5
1,519,847	+		IAI47_07195	0.66	-1.4
1,519,848	-		IAI47_07195	0.66	+0.1
1,519,848	-		IAI47_07195	0.66	+0.8
1,519,852	+		IAI47_07195	0.66	-0.7
1,519,853	-		IAI47_07195	0.67	+0.3
1,520,016	-		IAI47_07195	0.88	+1.0
1,520,063	+				-1.3
1,520,064	-				+0.8
1,520,064	-				-0.8
1,520,083	+				+0.0
1,520,083	+				-0.9
1,520,083	+				-1.4
1,520,083	+				+0.5
1,520,083	+				+1.5
1,520,083	+				+0.8
1,520,084	-				-0.9
1,520,084	-				-1.5
1,520,084	-				-0.2
1,520,084	-				-0.1
1,520,105	+				+1.2
1,520,105	+				-1.6
1,520,105	+				-0.6
1,520,106	-				-1.8
1,520,106	-				-0.5
1,520,145	-				-0.3
1,520,159	+				+0.7
1,520,159	+				+0.9
1,520,159	+				+1.6