Strain Fitness in Pantoea sp. MT58 around IAI47_21865

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
123,023	+		IAI47_21860	0.32	+1.4
123,023	+		IAI47_21860	0.32	-1.2
123,023	+		IAI47_21860	0.32	-0.6
123,023	+		IAI47_21860	0.32	+0.7
123,023	+		IAI47_21860	0.32	+2.8
123,024	-		IAI47_21860	0.32	+2.8
123,024	-		IAI47_21860	0.32	-1.6
123,024	-		IAI47_21860	0.32	-0.8
123,024	-		IAI47_21860	0.32	-0.5
123,024	-				+1.3
123,024	-		IAI47_21860	0.32	+1.1
123,056	-		IAI47_21860	0.35	+0.5
123,056	-		IAI47_21860	0.35	-0.7
123,056	-		IAI47_21860	0.35	-0.6
123,069	+		IAI47_21860	0.35	+0.1
123,069	+		IAI47_21860	0.35	-0.4
123,069	+		IAI47_21860	0.35	-1.7
123,069	+		IAI47_21860	0.35	+1.6
123,069	+		IAI47_21860	0.35	-1.4
123,069	+		IAI47_21860	0.35	+1.5
123,070	-		IAI47_21860	0.36	-1.6
123,070	-		IAI47_21860	0.36	+0.5
123,140	+		IAI47_21860	0.41	-0.0
123,141	-		IAI47_21860	0.41	-0.8
123,141	-		IAI47_21860	0.41	+1.9
123,141	-		IAI47_21860	0.41	+2.1
123,158	+		IAI47_21860	0.42	+0.7
123,158	+		IAI47_21860	0.42	+0.7
123,159	-		IAI47_21860	0.42	+0.3
123,159	-		IAI47_21860	0.42	+0.1
123,165	+		IAI47_21860	0.42	+2.1
123,165	+		IAI47_21860	0.42	-0.4
123,165	+		IAI47_21860	0.42	+1.9
123,185	+		IAI47_21860	0.44	+0.6
123,185	+		IAI47_21860	0.44	-0.7
123,185	+		IAI47_21860	0.44	-1.5
123,186	-		IAI47_21860	0.44	+0.3
123,186	-		IAI47_21860	0.44	-0.6
123,186	-		IAI47_21860	0.44	+2.1
123,231	+		IAI47_21860	0.47	-0.6
123,234	+		IAI47_21860	0.47	-1.9
123,235	-		IAI47_21860	0.48	-1.6
123,243	+		IAI47_21860	0.48	-0.3
123,243	+		IAI47_21860	0.48	-0.1
123,243	+		IAI47_21860	0.48	+2.2
123,243	+		IAI47_21860	0.48	+1.1
123,243	+		IAI47_21860	0.48	-0.4
123,244	-		IAI47_21860	0.48	-0.4
123,244	-		IAI47_21860	0.48	+0.5
123,244	-		IAI47_21860	0.48	+0.7
123,244	-		IAI47_21860	0.48	+1.8
123,244	-		IAI47_21860	0.48	+3.9
123,244	-		IAI47_21860	0.48	+1.8
123,244	-		IAI47_21860	0.48	-0.7
123,244	-		IAI47_21860	0.48	+0.5
123,295	-		IAI47_21860	0.52	-0.5
123,295	-		IAI47_21860	0.52	+1.2
123,308	-		IAI47_21860	0.53	+1.3
123,479	+		IAI47_21860	0.65	-1.2
123,479	+		IAI47_21860	0.65	+0.6
123,480	-		IAI47_21860	0.65	+0.3
123,480	-		IAI47_21860	0.65	-1.4
123,480	-		IAI47_21860	0.65	-0.3
123,480	-		IAI47_21860	0.65	-0.3
123,482	+		IAI47_21860	0.66	-1.5
123,483	-		IAI47_21860	0.66	+1.1
123,483	-		IAI47_21860	0.66	-1.7
123,483	-		IAI47_21860	0.66	-1.4
123,503	+		IAI47_21860	0.67	+2.1
123,503	+		IAI47_21860	0.67	-0.1
123,503	+		IAI47_21860	0.67	-0.1
123,504	-		IAI47_21860	0.67	+1.5
123,504	-		IAI47_21860	0.67	+0.4
123,504	-		IAI47_21860	0.67	-0.1
123,504	-		IAI47_21860	0.67	-1.1
123,504	-		IAI47_21860	0.67	+1.5
123,504	-		IAI47_21860	0.67	-0.6
123,505	-		IAI47_21860	0.67	-0.8
123,517	+		IAI47_21860	0.68	+1.2
123,517	+		IAI47_21860	0.68	+0.7
123,517	+		IAI47_21860	0.68	-0.3
123,517	+		IAI47_21860	0.68	+0.5
123,517	+		IAI47_21860	0.68	-0.1
123,517	+		IAI47_21860	0.68	-0.4
123,517	+		IAI47_21860	0.68	-0.0
123,517	+		IAI47_21860	0.68	-0.1
123,518	-		IAI47_21860	0.68	+1.3
123,518	-		IAI47_21860	0.68	+2.0
123,518	-		IAI47_21860	0.68	-0.5
123,518	-		IAI47_21860	0.68	+0.3
123,518	-		IAI47_21860	0.68	+0.5
123,518	-		IAI47_21860	0.68	+0.2
123,518	-		IAI47_21860	0.68	+1.5
123,518	-		IAI47_21860	0.68	+1.1
123,547	+		IAI47_21860	0.70	-1.6
123,548	-		IAI47_21860	0.70	-1.1
123,656	+		IAI47_21860	0.78	-0.9
123,657	-		IAI47_21860	0.78	+0.7
123,657	-		IAI47_21860	0.78	+0.3
123,657	-		IAI47_21860	0.78	+2.1
123,657	-		IAI47_21860	0.78	-0.6
123,674	+		IAI47_21860	0.80	+0.7
123,674	+		IAI47_21860	0.80	-2.5
123,675	-		IAI47_21860	0.80	+2.1
123,704	+		IAI47_21860	0.82	+1.3
123,733	+		IAI47_21860	0.84	-1.3
123,734	-		IAI47_21860	0.84	-1.0
123,744	+		IAI47_21860	0.85	-1.3
123,744	+		IAI47_21860	0.85	-0.6
123,745	-		IAI47_21860	0.85	-0.5
123,745	-		IAI47_21860	0.85	+2.2
123,745	-		IAI47_21860	0.85	+0.7
123,745	-		IAI47_21860	0.85	+0.5
123,764	+		IAI47_21860	0.86	+1.9
123,765	-		IAI47_21860	0.86	-0.1
123,765	-		IAI47_21860	0.86	+1.8
123,785	+		IAI47_21860	0.88	+0.7
123,800	+		IAI47_21860	0.89	+0.2
123,828	-				+1.6
123,905	+				+1.9
123,905	+				-0.6
123,905	+				+1.3
123,906	-				-0.6
123,906	-				-1.6
123,925	-				-0.4
123,942	+				+0.6
123,943	-				-0.8
123,943	-				+0.8
123,943	-				-1.6
123,946	+				+1.2
123,946	+				+1.8
123,946	+				+1.2
123,946	+				+2.7
123,946	+				-0.8
123,946	+				-0.3
123,947	-				+3.1
123,947	-				-0.1
123,947	-				+0.1
123,947	-				-2.2
123,947	-				+0.7
123,953	+				+1.4
123,953	+				-0.1
123,953	+				+0.6
123,953	+				+0.9
123,954	-				+0.7
123,955	+				+0.7
123,955	+				+0.1
123,955	+				-0.1
123,955	+				+1.5
123,955	+				-1.6
123,955	+				+0.5
123,955	+				+0.9
123,955	+				-1.1
123,955	+				-0.5
123,955	+				+0.3
123,955	+				-0.1
123,955	+				+1.8
123,955	+				-1.5
123,956	-				-2.2
123,956	-				+2.7
123,956	-				+0.6
123,956	-				-0.1
123,956	-				+2.5
123,956	-				+3.1
123,956	-				+0.7
123,956	-				+0.1
123,956	-				-0.9
123,956	-				+1.5
123,956	-				+0.7
123,956	-				-0.4
123,956	-				-1.0
123,956	-				-0.8
123,956	-				-1.4
123,956	-				+0.4
123,956	-				-1.0
123,956	-				+0.3
123,980	-				-0.5
124,042	+				-0.2
124,042	+				-0.7
124,043	-				-1.3
124,043	-				-1.6
124,106	+				-1.7
124,106	+				-0.1
124,106	+				+1.6
124,106	+				-1.3
124,106	+				+0.6
124,106	+				+0.1
124,106	+				-1.3
124,106	+				+0.1
124,106	+				+2.2
124,106	+				-0.6
124,106	+				+1.6
124,107	-				-1.2
124,107	-				-0.1
124,107	-				-1.7
124,107	-				+0.3
124,107	-				+0.7
124,110	+				+1.6
124,110	+				+0.8
124,111	-				+0.3
124,111	-				+1.1
124,111	-				+0.9
124,111	-				-0.2
124,168	-				+1.1
124,171	+				+2.2
124,209	+		IAI47_21865	0.12	-0.3
124,209	+		IAI47_21865	0.12	+0.9
124,209	+		IAI47_21865	0.12	-0.3
124,209	+		IAI47_21865	0.12	-0.2
124,209	+		IAI47_21865	0.12	+2.6
124,209	+		IAI47_21865	0.12	-1.1
124,210	-		IAI47_21865	0.12	+1.6
124,210	-		IAI47_21865	0.12	+0.9
124,221	+		IAI47_21865	0.13	+2.3
124,221	+		IAI47_21865	0.13	-1.4
124,253	+		IAI47_21865	0.15	+0.3
124,253	+		IAI47_21865	0.15	-0.9
124,254	-		IAI47_21865	0.15	-1.1
124,277	+		IAI47_21865	0.17	+0.1
124,277	+		IAI47_21865	0.17	+2.5
124,277	+		IAI47_21865	0.17	+2.1
124,277	+		IAI47_21865	0.17	+1.1
124,277	+		IAI47_21865	0.17	-1.5
124,277	+		IAI47_21865	0.17	+0.2
124,277	+		IAI47_21865	0.17	-0.7
124,278	-		IAI47_21865	0.17	-0.2
124,278	-		IAI47_21865	0.17	+0.7
124,278	-		IAI47_21865	0.17	-0.8
124,278	-		IAI47_21865	0.17	+0.3
124,283	+		IAI47_21865	0.17	+1.9
124,283	+		IAI47_21865	0.17	+1.0
124,283	+		IAI47_21865	0.17	+0.1
124,284	-		IAI47_21865	0.17	-1.0
124,284	-		IAI47_21865	0.17	-0.3
124,284	-		IAI47_21865	0.17	+0.5
124,295	+		IAI47_21865	0.18	+1.0
124,295	+		IAI47_21865	0.18	+0.7
124,295	+		IAI47_21865	0.18	+0.0
124,296	-		IAI47_21865	0.18	+0.6
124,296	-		IAI47_21865	0.18	+1.3
124,341	+		IAI47_21865	0.21	+0.3
124,341	+		IAI47_21865	0.21	+1.7
124,341	+		IAI47_21865	0.21	-1.2
124,342	-		IAI47_21865	0.21	-0.8
124,358	+		IAI47_21865	0.22	+3.2
124,358	+		IAI47_21865	0.22	+1.3
124,358	+		IAI47_21865	0.22	+0.1
124,358	+		IAI47_21865	0.22	-0.3
124,358	+		IAI47_21865	0.22	+0.8
124,358	+		IAI47_21865	0.22	+1.8
124,358	+		IAI47_21865	0.22	+1.6
124,358	+		IAI47_21865	0.22	+0.8
124,359	-		IAI47_21865	0.22	-1.4
124,359	-		IAI47_21865	0.22	-0.6
124,359	-		IAI47_21865	0.22	+0.9
124,359	-		IAI47_21865	0.22	-0.9
124,359	-		IAI47_21865	0.22	-0.2
124,359	-		IAI47_21865	0.22	+0.3
124,376	+		IAI47_21865	0.23	-0.6
124,376	+		IAI47_21865	0.23	+1.0
124,377	-		IAI47_21865	0.23	+0.8
124,402	+		IAI47_21865	0.25	+1.1
124,403	-		IAI47_21865	0.25	+2.2
124,535	+		IAI47_21865	0.33	-0.3
124,535	+		IAI47_21865	0.33	+0.2
124,535	+		IAI47_21865	0.33	-0.6
124,536	-		IAI47_21865	0.34	+0.1
124,536	-		IAI47_21865	0.34	+2.1
124,574	+		IAI47_21865	0.36	+1.7
124,574	+		IAI47_21865	0.36	+0.1
124,575	-		IAI47_21865	0.36	-0.2
124,575	-		IAI47_21865	0.36	-2.3
124,609	+		IAI47_21865	0.38	+0.8
124,609	+		IAI47_21865	0.38	+0.7
124,609	+		IAI47_21865	0.38	-0.1
124,609	+		IAI47_21865	0.38	-0.6
124,609	+		IAI47_21865	0.38	-1.6
124,609	+		IAI47_21865	0.38	-0.0
124,609	+		IAI47_21865	0.38	+1.1
124,610	-		IAI47_21865	0.38	+1.5
124,610	-		IAI47_21865	0.38	-0.7
124,610	-		IAI47_21865	0.38	-1.3
124,610	-		IAI47_21865	0.38	-0.4
124,671	+		IAI47_21865	0.42	+0.5
124,672	-		IAI47_21865	0.42	-1.1
124,686	+		IAI47_21865	0.43	+1.2
124,687	-		IAI47_21865	0.43	-1.5
124,722	+		IAI47_21865	0.46	-0.6
124,739	+		IAI47_21865	0.47	+2.3
124,739	+		IAI47_21865	0.47	+2.1
124,739	+		IAI47_21865	0.47	-1.2
124,740	-		IAI47_21865	0.47	-0.8
124,740	-		IAI47_21865	0.47	+0.5
124,740	-		IAI47_21865	0.47	-0.9
124,740	-		IAI47_21865	0.47	+1.1
124,752	+		IAI47_21865	0.48	+1.1
124,782	+		IAI47_21865	0.50	+0.4
124,790	+		IAI47_21865	0.50	+0.1
124,791	-		IAI47_21865	0.50	-0.6
124,807	-		IAI47_21865	0.51	+2.1
124,807	-		IAI47_21865	0.51	+4.1
124,835	+		IAI47_21865	0.53	+0.5
124,835	+		IAI47_21865	0.53	-0.8
124,836	-		IAI47_21865	0.53	-0.4
124,836	-		IAI47_21865	0.53	-0.3
124,852	-		IAI47_21865	0.54	+1.4
124,899	+		IAI47_21865	0.57	-0.7
124,900	-		IAI47_21865	0.57	+1.0
124,900	-		IAI47_21865	0.57	-0.1
124,900	-		IAI47_21865	0.57	+0.1
124,932	+		IAI47_21865	0.59	+0.9
124,932	+		IAI47_21865	0.59	+0.5
124,932	+		IAI47_21865	0.59	-1.7
124,933	-		IAI47_21865	0.59	-0.6
124,938	+		IAI47_21865	0.60	+2.2
124,938	+		IAI47_21865	0.60	+1.6
124,939	-		IAI47_21865	0.60	+0.5
124,939	-		IAI47_21865	0.60	+4.3
124,939	-		IAI47_21865	0.60	+0.0
124,939	-		IAI47_21865	0.60	+1.5
125,029	-		IAI47_21865	0.66	+0.8
125,030	+		IAI47_21865	0.66	+0.6
125,030	+		IAI47_21865	0.66	+1.8
125,030	+		IAI47_21865	0.66	+0.2
125,030	+		IAI47_21865	0.66	-0.2
125,030	+		IAI47_21865	0.66	+1.1
125,030	+		IAI47_21865	0.66	-0.3
125,030	+		IAI47_21865	0.66	+0.1
125,030	+		IAI47_21865	0.66	-0.3
125,031	-		IAI47_21865	0.66	-1.7
125,031	-		IAI47_21865	0.66	+2.3
125,031	-		IAI47_21865	0.66	-0.4
125,031	-		IAI47_21865	0.66	+0.4
125,031	-		IAI47_21865	0.66	+0.3
125,031	-		IAI47_21865	0.66	-0.2
125,031	-		IAI47_21865	0.66	-0.2
125,031	-		IAI47_21865	0.66	-0.2
125,073	+		IAI47_21865	0.68	+0.4
125,073	+		IAI47_21865	0.68	+1.5
125,073	+		IAI47_21865	0.68	-0.4
125,074	-		IAI47_21865	0.69	-1.3
125,074	-		IAI47_21865	0.69	-1.9
125,074	-		IAI47_21865	0.69	+2.1
125,074	-		IAI47_21865	0.69	+0.0
125,074	-		IAI47_21865	0.69	+0.2
125,082	+		IAI47_21865	0.69	+2.1
125,082	+		IAI47_21865	0.69	+0.9
125,083	-		IAI47_21865	0.69	+0.2
125,097	+		IAI47_21865	0.70	+1.2
125,097	+		IAI47_21865	0.70	+1.4
125,097	+		IAI47_21865	0.70	-1.3
125,097	+		IAI47_21865	0.70	-0.8
125,097	+		IAI47_21865	0.70	+2.9
125,120	+		IAI47_21865	0.72	+1.1
125,120	+		IAI47_21865	0.72	+0.7
125,120	+		IAI47_21865	0.72	+1.6
125,120	+		IAI47_21865	0.72	-0.6
125,120	+		IAI47_21865	0.72	+0.9
125,120	+		IAI47_21865	0.72	-0.8
125,120	+		IAI47_21865	0.72	-0.4
125,120	+		IAI47_21865	0.72	-0.5
125,120	+		IAI47_21865	0.72	+0.5
125,120	+		IAI47_21865	0.72	+2.6
125,120	+		IAI47_21865	0.72	-0.0
125,120	+		IAI47_21865	0.72	-0.0
125,120	+		IAI47_21865	0.72	-1.0
125,120	+		IAI47_21865	0.72	+0.5
125,120	+		IAI47_21865	0.72	-0.8
125,120	+		IAI47_21865	0.72	-1.2
125,121	-		IAI47_21865	0.72	-1.0
125,121	-		IAI47_21865	0.72	+2.4
125,121	-		IAI47_21865	0.72	+0.7
125,121	-		IAI47_21865	0.72	-0.4
125,121	-		IAI47_21865	0.72	-0.6
125,121	-		IAI47_21865	0.72	-1.7
125,121	-		IAI47_21865	0.72	+0.9
125,121	-		IAI47_21865	0.72	+1.4
125,121	-		IAI47_21865	0.72	+1.8
125,121	-		IAI47_21865	0.72	-2.4
125,121	-		IAI47_21865	0.72	+0.8
125,121	-		IAI47_21865	0.72	+1.6
125,121	-		IAI47_21865	0.72	+2.4
125,121	-		IAI47_21865	0.72	+1.2
125,125	-		IAI47_21865	0.72	-1.9
125,125	-		IAI47_21865	0.72	-1.1
125,125	-		IAI47_21865	0.72	-0.8
125,241	-		IAI47_21865	0.79	-2.1
125,316	+		IAI47_21865	0.84	+2.5
125,316	+		IAI47_21865	0.84	-0.8
125,317	-		IAI47_21865	0.84	-0.1
125,317	-		IAI47_21865	0.84	-2.6
125,317	-		IAI47_21865	0.84	+1.3
125,338	+		IAI47_21865	0.86	+1.3
125,339	-		IAI47_21865	0.86	-0.5
125,339	-		IAI47_21865	0.86	+1.1
125,339	-		IAI47_21865	0.86	+0.4
125,475	+				+0.6
125,475	+				+3.1
125,475	+				+1.9
125,475	+				-2.1
125,476	-				+0.0
125,476	-				-0.8
125,508	+				+0.3
125,508	-				-0.2
125,509	-				-1.6
125,509	-				+1.4
125,518	+				+0.3
125,518	+				-1.5
125,518	+				+0.5
125,518	+				+2.1
125,518	+				+2.2
125,519	-				-2.6
125,519	-				-0.8
125,521	+				+0.5
125,522	-				-0.5
125,522	-				-0.8
125,522	-				+3.8
125,579	+				+1.7
125,579	+				+0.5
125,579	+				-0.5
125,579	+				+0.4
125,579	+				-1.0
125,579	+				+0.1
125,579	+				+0.5
125,579	+				+1.9
125,579	+				+0.5
125,580	-				-2.2
125,580	-				-0.5
125,580	-				+2.1
125,580	-				-1.7
125,623	+				-0.4
125,624	-				+1.1
125,660	-				+3.9
125,683	+				-2.2
125,683	+				+3.1
125,683	+				+0.9
125,684	-				-1.3
125,684	-				+0.5
125,684	-				+0.7
125,715	-				+2.8
125,869	+		IAI47_21870	0.17	-1.0
125,870	-		IAI47_21870	0.17	+1.1
125,870	-		IAI47_21870	0.17	-1.0
125,954	+		IAI47_21870	0.26	-0.0
125,993	-		IAI47_21870	0.30	-0.1
125,993	-		IAI47_21870	0.30	+0.1
125,993	-		IAI47_21870	0.30	+3.4
125,993	-		IAI47_21870	0.30	-0.8
125,995	+		IAI47_21870	0.30	+1.0
125,995	+		IAI47_21870	0.30	+0.6
125,996	-		IAI47_21870	0.31	+0.5
125,996	-		IAI47_21870	0.31	+2.5
126,003	+		IAI47_21870	0.31	+1.0
126,099	+		IAI47_21870	0.42	+1.4
126,100	-		IAI47_21870	0.42	+0.4
126,106	+		IAI47_21870	0.42	-1.3
126,106	+		IAI47_21870	0.42	+0.7
126,106	+		IAI47_21870	0.42	+2.1
126,106	+		IAI47_21870	0.42	-0.0
126,106	+		IAI47_21870	0.42	+1.9
126,107	-		IAI47_21870	0.43	+0.5
126,107	-		IAI47_21870	0.43	+0.2
126,220	-		IAI47_21870	0.55	-0.5
126,250	+		IAI47_21870	0.58	+1.6
126,250	+		IAI47_21870	0.58	+6.6
126,342	+		IAI47_21870	0.68	-1.2
126,342	+		IAI47_21870	0.68	-0.9
126,342	+		IAI47_21870	0.68	-1.1
126,342	+		IAI47_21870	0.68	-0.3
126,343	-		IAI47_21870	0.68	+1.1
126,343	-		IAI47_21870	0.68	-2.3
126,343	-		IAI47_21870	0.68	+0.3
126,343	-		IAI47_21870	0.68	-0.8
126,348	+		IAI47_21870	0.69	-0.3
126,349	-		IAI47_21870	0.69	+3.1
126,349	-		IAI47_21870	0.69	+0.3
126,349	-		IAI47_21870	0.69	+0.9
126,349	-		IAI47_21870	0.69	+1.4
126,349	-		IAI47_21870	0.69	+1.4
126,349	-		IAI47_21870	0.69	-0.6
126,349	-		IAI47_21870	0.69	+0.5
126,422	+		IAI47_21870	0.76	+1.9
126,422	+		IAI47_21870	0.76	+1.7
126,422	+		IAI47_21870	0.76	-0.5
126,423	-		IAI47_21870	0.77	-0.3
126,423	-		IAI47_21870	0.77	-0.7
126,423	-		IAI47_21870	0.77	-0.3
126,423	-		IAI47_21870	0.77	+3.1
126,429	+		IAI47_21870	0.77	+2.4
126,429	+		IAI47_21870	0.77	+1.5
126,430	-		IAI47_21870	0.77	+0.1
126,462	+		IAI47_21870	0.81	-0.7
126,463	-		IAI47_21870	0.81	+0.1
126,498	+		IAI47_21870	0.85	-1.1
126,498	+		IAI47_21870	0.85	+0.3
126,543	+		IAI47_21870	0.90	+2.6
126,544	-		IAI47_21870	0.90	+0.5