Strain Fitness in Pantoea sp. MT58 around IAI47_21540

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
46,527	-		IAI47_21535	0.76	-2.4
46,527	-		IAI47_21535	0.76	+1.4
46,527	-		IAI47_21535	0.76	+2.4
46,527	-		IAI47_21535	0.76	-1.9
46,579	+		IAI47_21535	0.78	-1.3
46,579	+		IAI47_21535	0.78	-1.2
46,579	+		IAI47_21535	0.78	-1.3
46,579	+		IAI47_21535	0.78	+0.7
46,579	+		IAI47_21535	0.78	-1.1
46,580	-		IAI47_21535	0.78	-0.8
46,702	+		IAI47_21535	0.83	+0.9
46,703	-		IAI47_21535	0.83	-1.3
46,703	-		IAI47_21535	0.83	-0.4
46,703	-		IAI47_21535	0.83	+1.1
46,703	-		IAI47_21535	0.83	-0.6
46,703	-		IAI47_21535	0.83	-0.8
46,745	+		IAI47_21535	0.85	-1.4
46,745	+		IAI47_21535	0.85	-2.2
46,745	+		IAI47_21535	0.85	-1.0
46,745	+		IAI47_21535	0.85	-0.6
46,745	+		IAI47_21535	0.85	-1.1
46,746	-		IAI47_21535	0.85	+0.7
46,746	-		IAI47_21535	0.85	-0.3
46,746	-		IAI47_21535	0.85	-0.0
46,746	-		IAI47_21535	0.85	+0.3
46,746	-		IAI47_21535	0.85	+0.9
46,746	-		IAI47_21535	0.85	+0.7
46,751	+		IAI47_21535	0.85	+1.3
46,751	+		IAI47_21535	0.85	-0.3
46,751	+		IAI47_21535	0.85	-1.5
46,751	+		IAI47_21535	0.85	-0.8
46,751	+		IAI47_21535	0.85	+1.2
46,751	+		IAI47_21535	0.85	-1.7
46,751	+		IAI47_21535	0.85	+0.6
46,751	+		IAI47_21535	0.85	+0.3
46,752	-		IAI47_21535	0.85	+1.0
46,755	+		IAI47_21535	0.86	+0.0
46,755	+		IAI47_21535	0.86	-0.6
46,755	+		IAI47_21535	0.86	+1.1
46,755	+		IAI47_21535	0.86	+1.4
46,756	-		IAI47_21535	0.86	-0.5
46,756	-		IAI47_21535	0.86	+0.9
46,772	+		IAI47_21535	0.86	-1.2
46,772	+		IAI47_21535	0.86	-0.9
46,773	-		IAI47_21535	0.86	-1.0
46,773	-		IAI47_21535	0.86	-1.6
46,773	-		IAI47_21535	0.86	-0.7
46,802	-		IAI47_21535	0.88	-1.9
46,858	+				-0.7
46,865	+				+1.2
46,865	+				+0.3
46,865	+				-0.3
46,865	+				+0.5
46,866	-				-0.5
46,866	-				+0.1
46,866	-				+0.4
46,921	+				+0.7
46,922	-				+1.9
46,944	+				+0.7
46,944	+				+1.3
46,944	+				-1.3
46,944	+				+1.1
46,944	+				-0.3
46,945	-				+1.1
46,945	-				+1.2
46,945	-				-0.3
46,945	-				+1.2
46,954	+				+0.5
46,954	+				+2.1
47,007	+				-0.2
47,008	-				+1.1
47,008	-				-0.9
47,078	+				-0.5
47,088	-				-1.0
47,110	+				+0.1
47,111	-				-0.2
47,153	+				-1.3
47,154	-				-0.7
47,169	+				-1.2
47,169	+				+0.0
47,170	-				+1.5
47,170	-				-1.8
47,170	-				+0.7
47,186	+				-0.6
47,186	+				+2.1
47,186	+				-1.2
47,186	+				+2.4
47,186	+				+1.1
47,186	+				+1.1
47,186	+				-0.3
47,186	+				+0.6
47,186	+				+1.2
47,187	-				+1.8
47,187	-				-0.2
47,187	-				+0.7
47,187	-				+0.3
47,187	-				-0.0
47,187	-				-0.2
47,197	-				+1.6
47,197	-				-1.6
47,197	-				+3.1
47,218	-				+0.9
47,236	+				+0.0
47,237	-				+1.3
47,237	-				-0.1
47,237	-				-0.8
47,239	+				-0.6
47,240	-				-1.8
47,288	+				+0.4
47,288	+				-2.4
47,290	+				+0.7
47,290	+				-0.5
47,290	+				-0.6
47,290	+				+0.1
47,290	+				-0.8
47,290	+				+0.7
47,290	+				-0.2
47,291	-				-0.4
47,291	-				+1.7
47,291	-				+2.6
47,365	-				-1.5
47,365	-				+0.6
47,365	-				+1.6
47,374	+				+0.6
47,374	+				-0.8
47,374	+				-2.1
47,374	+				-0.6
47,374	+				-0.7
47,375	-				-0.9
47,375	-				+0.4
47,375	-				+1.1
47,385	+				-0.1
47,386	-				-0.8
47,386	-				+0.2
47,407	+				-0.6
47,407	+				+1.8
47,408	-				-2.0
47,408	-				-0.2
47,408	-				-1.5
47,427	+				-1.8
47,428	-				+0.9
47,428	-				-1.7
47,450	+				+0.3
47,451	-				-1.3
47,451	-				-1.3
47,451	-				+0.6
47,451	-				+0.5
47,481	-				+2.5
47,495	+				+0.8
47,495	+				-0.6
47,495	+				-1.0
47,497	+				+1.3
47,497	+				+0.7
47,498	-				-0.5
47,498	-				+2.5
47,498	-				-0.4
47,517	-				-0.5
47,517	-				+0.6
47,517	-				-1.0
47,523	+				+1.4
47,523	+				+0.6
47,523	+				+0.0
47,524	-				+2.7
47,524	-				+0.3
47,524	-				+0.9
47,534	+				+0.8
47,534	+				-1.3
47,534	+				+0.1
47,535	-				+1.8
47,550	+				+2.2
47,550	+				-1.3
47,550	+				-1.3
47,551	-				-1.7
47,551	-				+1.6
47,551	-				+0.7
47,551	-				-0.3
47,551	-				+4.2
47,551	-				+0.8
47,560	+				-2.5
47,561	-				+0.2
47,567	+				-1.1
47,567	+				+0.5
47,581	+				+0.5
47,581	+				-0.3
47,581	+				+0.3
47,581	+				-0.9
47,581	+				-0.4
47,581	+				-0.5
47,581	+				-0.1
47,581	+				-2.0
47,582	-				+2.1
47,582	-				-0.5
47,582	-				+0.5
47,602	+				+0.5
47,603	-				-0.8
47,604	+				-2.1
47,604	+				+0.8
47,604	+				-1.1
47,605	-				+0.3
47,647	+		IAI47_21540	0.12	+3.2
47,647	+		IAI47_21540	0.12	-0.3
47,647	+		IAI47_21540	0.12	+1.0
47,648	-		IAI47_21540	0.12	-0.7
47,648	-		IAI47_21540	0.12	+1.1
47,648	-		IAI47_21540	0.12	+0.1
47,648	-		IAI47_21540	0.12	-0.1
47,648	-		IAI47_21540	0.12	-0.4
47,648	-		IAI47_21540	0.12	-1.2
47,651	-		IAI47_21540	0.12	-0.2
47,727	+		IAI47_21540	0.19	+0.5
47,727	+		IAI47_21540	0.19	+0.5
47,740	+		IAI47_21540	0.21	-0.7
47,834	+		IAI47_21540	0.30	-1.3
47,834	+		IAI47_21540	0.30	+2.2
47,868	+		IAI47_21540	0.33	+0.4
47,868	+		IAI47_21540	0.33	-0.2
47,868	+		IAI47_21540	0.33	+0.5
47,868	+		IAI47_21540	0.33	-0.7
47,868	+		IAI47_21540	0.33	-0.9
47,869	-		IAI47_21540	0.33	-0.6
47,869	-		IAI47_21540	0.33	+1.7
47,869	-		IAI47_21540	0.33	-1.1
47,884	+		IAI47_21540	0.35	-0.6
47,885	-		IAI47_21540	0.35	+1.3
47,885	-		IAI47_21540	0.35	+2.1
47,903	+		IAI47_21540	0.36	+0.1
47,904	-		IAI47_21540	0.37	-0.7
47,904	-		IAI47_21540	0.37	-0.5
47,904	-		IAI47_21540	0.37	+1.5
47,904	-		IAI47_21540	0.37	+0.6
47,904	-		IAI47_21540	0.37	-1.4
47,904	-		IAI47_21540	0.37	-0.5
47,951	+		IAI47_21540	0.41	-0.7
47,951	+		IAI47_21540	0.41	+2.7
47,952	-		IAI47_21540	0.41	-1.1
47,952	-		IAI47_21540	0.41	-1.5
48,001	+		IAI47_21540	0.46	+0.3
48,038	+		IAI47_21540	0.49	+1.9
48,038	+		IAI47_21540	0.49	+1.1
48,039	-		IAI47_21540	0.50	-0.1
48,039	-		IAI47_21540	0.50	+2.0
48,065	+		IAI47_21540	0.52	+1.1
48,066	-		IAI47_21540	0.52	-0.8
48,066	-		IAI47_21540	0.52	+1.1
48,075	+		IAI47_21540	0.53	-0.7
48,075	+		IAI47_21540	0.53	+2.1
48,075	+		IAI47_21540	0.53	-0.7
48,075	+		IAI47_21540	0.53	-0.7
48,076	-		IAI47_21540	0.53	+2.3
48,076	-		IAI47_21540	0.53	+1.7
48,080	+		IAI47_21540	0.53	+0.9
48,080	+		IAI47_21540	0.53	+3.2
48,080	+		IAI47_21540	0.53	+2.0
48,080	+		IAI47_21540	0.53	-1.2
48,080	+		IAI47_21540	0.53	-1.0
48,081	-		IAI47_21540	0.54	-1.9
48,081	-		IAI47_21540	0.54	+1.2
48,081	-		IAI47_21540	0.54	+3.2
48,081	-		IAI47_21540	0.54	-0.2
48,081	-		IAI47_21540	0.54	+1.5
48,081	-		IAI47_21540	0.54	+2.6
48,081	-		IAI47_21540	0.54	+1.6
48,081	-		IAI47_21540	0.54	+3.3
48,087	-		IAI47_21540	0.54	+0.1
48,087	-		IAI47_21540	0.54	+0.8
48,087	-		IAI47_21540	0.54	-1.8
48,107	+		IAI47_21540	0.56	+2.5
48,107	+		IAI47_21540	0.56	-0.1
48,107	+		IAI47_21540	0.56	+1.8
48,107	+		IAI47_21540	0.56	-0.3
48,108	-		IAI47_21540	0.56	+2.1
48,160	+		IAI47_21540	0.61	+2.9
48,160	+		IAI47_21540	0.61	-1.8
48,161	-		IAI47_21540	0.61	+0.4
48,161	-		IAI47_21540	0.61	+1.9
48,219	-		IAI47_21540	0.67	-1.7
48,227	+		IAI47_21540	0.68	+1.3
48,227	+		IAI47_21540	0.68	+0.5
48,228	-		IAI47_21540	0.68	-1.4
48,233	-		IAI47_21540	0.68	+2.2
48,233	-		IAI47_21540	0.68	+2.5
48,251	+		IAI47_21540	0.70	+0.1
48,251	+		IAI47_21540	0.70	+1.1
48,252	-		IAI47_21540	0.70	-1.1
48,252	-		IAI47_21540	0.70	+1.4
48,284	+		IAI47_21540	0.73	+1.4
48,285	-		IAI47_21540	0.73	+0.5
48,313	+		IAI47_21540	0.76	-0.6
48,314	-		IAI47_21540	0.76	+0.3
48,314	-		IAI47_21540	0.76	+1.3
48,357	+		IAI47_21540	0.80	+2.5
48,357	+		IAI47_21540	0.80	-0.6
48,357	+		IAI47_21540	0.80	+0.2
48,357	+		IAI47_21540	0.80	+1.6
48,357	+		IAI47_21540	0.80	+0.1
48,358	-		IAI47_21540	0.80	-0.9
48,404	-		IAI47_21540	0.85	+1.3
48,421	+		IAI47_21540	0.86	+0.5
48,422	-		IAI47_21540	0.86	+2.5
48,460	+				-1.2
48,461	-				+0.1
48,461	-				+0.2
48,478	+				+0.1
48,479	-				-0.3
48,479	-				+1.7
48,537	+				+0.8
48,538	-				-1.1
48,538	-				+2.1
48,538	-				-1.8
48,551	+				-1.4
48,551	+				+0.3
48,551	+				+0.2
48,552	-				-0.1
48,602	+				-0.5
48,603	-				-1.1
48,632	+				-0.7
48,633	-				+1.8
48,633	-				-0.1
48,650	+				+1.2
48,650	+				+0.3
48,651	-				-0.9
48,663	+				-0.7
48,663	+				-0.7
48,664	-				+2.8
48,664	-				+0.5
48,664	-				-0.4
48,664	-				+0.4
48,680	+				-1.3
48,681	-				+1.8
48,681	-				-0.1
48,718	+				-0.3
48,729	-				+0.3
48,729	-				+1.1
48,738	+				+0.5
48,741	-				-0.1
48,742	-				+1.7
48,747	+				+2.1
48,747	+				-0.6
48,748	-				+2.6
48,748	-				+0.9
48,761	-				-1.0
48,772	+				-1.4
48,772	+				-0.3
48,772	+				-0.6
48,773	-				-1.2
48,773	-				+2.1
48,778	+				-0.7
48,828	+				+1.1
48,828	+				-0.1
48,836	+				+0.6
48,836	+				+0.7
48,837	-				-1.8
48,845	+				-2.0
48,863	+				+1.1
48,864	-				+1.4
48,864	-				+0.6
48,864	-				+0.6
48,876	+				+2.0
48,900	+				-0.5
48,901	-				-1.5
48,901	-				-0.7
48,938	+				+2.2
48,950	-				-0.4
48,955	+				+1.0
48,956	-				+0.3
49,034	-				-0.4
49,042	+				-0.2
49,064	+				-0.7
49,105	-				+1.5
49,113	+				-0.3
49,114	-				-0.6
49,156	-				+1.5
49,242	-		IAI47_21545	0.12	+1.3
49,263	-		IAI47_21545	0.17	-1.2
49,268	+		IAI47_21545	0.18	+0.2
49,270	+		IAI47_21545	0.18	-0.3
49,271	-		IAI47_21545	0.18	+1.4
49,357	+		IAI47_21545	0.37	+1.7
49,357	+		IAI47_21545	0.37	-0.3
49,357	+		IAI47_21545	0.37	-0.4
49,357	+		IAI47_21545	0.37	+0.3
49,357	+		IAI47_21545	0.37	+1.8
49,357	+		IAI47_21545	0.37	+0.8
49,358	-		IAI47_21545	0.37	+0.6
49,358	-		IAI47_21545	0.37	+0.6
49,359	+		IAI47_21545	0.37	+1.3
49,359	+		IAI47_21545	0.37	+1.5
49,359	+		IAI47_21545	0.37	+1.5
49,359	+		IAI47_21545	0.37	-1.2
49,360	-		IAI47_21545	0.37	-0.3
49,360	-		IAI47_21545	0.37	-0.5
49,360	-		IAI47_21545	0.37	-0.3
49,360	-		IAI47_21545	0.37	-0.7
49,360	-		IAI47_21545	0.37	-0.4
49,378	+		IAI47_21545	0.41	-1.7
49,397	+		IAI47_21545	0.45	+0.5
49,398	-		IAI47_21545	0.45	-1.0
49,424	+		IAI47_21545	0.51	-1.1
49,424	+		IAI47_21545	0.51	-1.4
49,424	+		IAI47_21545	0.51	-1.5
49,425	-		IAI47_21545	0.51	+1.2
49,425	-		IAI47_21545	0.51	-0.6
49,425	-		IAI47_21545	0.51	+3.1
49,499	+		IAI47_21545	0.67	-0.8
49,499	+		IAI47_21545	0.67	-0.1
49,500	-		IAI47_21545	0.67	-0.3
49,500	-		IAI47_21545	0.67	-1.1
49,500	-		IAI47_21545	0.67	-1.5
49,500	-		IAI47_21545	0.67	+0.6
49,500	-		IAI47_21545	0.67	+0.1
49,500	-		IAI47_21545	0.67	+1.6
49,502	+		IAI47_21545	0.67	+1.9
49,502	+		IAI47_21545	0.67	-1.1
49,502	+		IAI47_21545	0.67	-1.1
49,502	+		IAI47_21545	0.67	+0.9
49,503	-		IAI47_21545	0.68	+0.1
49,503	-		IAI47_21545	0.68	+0.3
49,503	-		IAI47_21545	0.68	-0.1
49,503	-		IAI47_21545	0.68	+0.4
49,503	-		IAI47_21545	0.68	-0.6
49,503	-		IAI47_21545	0.68	+1.1
49,525	-		IAI47_21545	0.72	+0.8
49,526	+		IAI47_21545	0.72	-0.9
49,527	-		IAI47_21545	0.73	-1.7
49,547	+		IAI47_21545	0.77	+1.0
49,548	-		IAI47_21545	0.77	+2.7