Strain Fitness in Pantoea sp. MT58 around IAI47_18330

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,900,411	+		IAI47_18325	0.38	+0.3
3,900,411	+		IAI47_18325	0.38	-0.1
3,900,411	+		IAI47_18325	0.38	-0.2
3,900,412	-		IAI47_18325	0.39	+0.3
3,900,430	+		IAI47_18325	0.41	-1.1
3,900,431	-		IAI47_18325	0.41	+0.5
3,900,431	-		IAI47_18325	0.41	+0.7
3,900,466	+		IAI47_18325	0.45	+0.4
3,900,466	+		IAI47_18325	0.45	-1.3
3,900,466	+		IAI47_18325	0.45	+0.8
3,900,466	+		IAI47_18325	0.45	-1.2
3,900,466	+		IAI47_18325	0.45	-0.7
3,900,466	+		IAI47_18325	0.45	+0.9
3,900,466	+		IAI47_18325	0.45	-1.4
3,900,466	+		IAI47_18325	0.45	-1.3
3,900,467	-		IAI47_18325	0.45	-0.5
3,900,467	-		IAI47_18325	0.45	-0.7
3,900,467	-		IAI47_18325	0.45	+1.1
3,900,467	-		IAI47_18325	0.45	-0.5
3,900,467	-		IAI47_18325	0.45	-0.7
3,900,467	-		IAI47_18325	0.45	+0.6
3,900,467	-		IAI47_18325	0.45	-0.6
3,900,468	+		IAI47_18325	0.45	-1.9
3,900,468	+		IAI47_18325	0.45	-1.6
3,900,468	+		IAI47_18325	0.45	-1.2
3,900,468	+		IAI47_18325	0.45	-2.1
3,900,469	-		IAI47_18325	0.45	-0.1
3,900,469	-		IAI47_18325	0.45	+0.5
3,900,469	-		IAI47_18325	0.45	+0.3
3,900,469	-		IAI47_18325	0.45	+0.5
3,900,469	-		IAI47_18325	0.45	+1.7
3,900,469	-		IAI47_18325	0.45	-0.4
3,900,469	-		IAI47_18325	0.45	-0.5
3,900,469	-		IAI47_18325	0.45	+0.6
3,900,469	-		IAI47_18325	0.45	+0.8
3,900,469	-		IAI47_18325	0.45	+3.0
3,900,473	+		IAI47_18325	0.46	-1.0
3,900,473	+		IAI47_18325	0.46	+0.2
3,900,473	+		IAI47_18325	0.46	+0.5
3,900,473	+		IAI47_18325	0.46	+0.3
3,900,473	+		IAI47_18325	0.46	-0.7
3,900,474	-		IAI47_18325	0.46	+0.3
3,900,474	-		IAI47_18325	0.46	-0.4
3,900,474	-		IAI47_18325	0.46	+0.3
3,900,474	-		IAI47_18325	0.46	-1.1
3,900,512	+		IAI47_18325	0.50	+0.4
3,900,512	+		IAI47_18325	0.50	-1.7
3,900,513	-		IAI47_18325	0.50	+1.1
3,900,513	-		IAI47_18325	0.50	-0.2
3,900,552	+		IAI47_18325	0.55	-1.0
3,900,552	+		IAI47_18325	0.55	+1.6
3,900,560	-		IAI47_18325	0.56	-0.7
3,900,598	+		IAI47_18325	0.60	-0.8
3,900,598	+		IAI47_18325	0.60	+0.4
3,900,598	+		IAI47_18325	0.60	-1.1
3,900,598	+		IAI47_18325	0.60	+1.8
3,900,598	+		IAI47_18325	0.60	-2.2
3,900,599	-		IAI47_18325	0.60	-2.4
3,900,599	-		IAI47_18325	0.60	+0.7
3,900,600	+		IAI47_18325	0.60	-2.3
3,900,600	+		IAI47_18325	0.60	+0.2
3,900,601	-		IAI47_18325	0.61	-1.5
3,900,601	-		IAI47_18325	0.61	+0.2
3,900,601	-		IAI47_18325	0.61	+2.5
3,900,636	+		IAI47_18325	0.65	+0.5
3,900,636	+		IAI47_18325	0.65	+1.1
3,900,636	+		IAI47_18325	0.65	-0.3
3,900,636	+		IAI47_18325	0.65	-0.4
3,900,637	-		IAI47_18325	0.65	+0.3
3,900,637	-		IAI47_18325	0.65	-0.6
3,900,637	-		IAI47_18325	0.65	+0.6
3,900,637	-		IAI47_18325	0.65	-0.0
3,900,637	-		IAI47_18325	0.65	+0.2
3,900,637	-		IAI47_18325	0.65	-1.1
3,900,637	-		IAI47_18325	0.65	+0.1
3,900,651	+		IAI47_18325	0.66	-2.6
3,900,651	+		IAI47_18325	0.66	+1.8
3,900,651	+		IAI47_18325	0.66	-0.7
3,900,651	+		IAI47_18325	0.66	+0.5
3,900,652	-		IAI47_18325	0.66	+0.2
3,900,670	+		IAI47_18325	0.69	-1.7
3,900,670	+		IAI47_18325	0.69	+0.7
3,900,670	+		IAI47_18325	0.69	-0.7
3,900,671	-		IAI47_18325	0.69	+3.5
3,900,671	-		IAI47_18325	0.69	+1.6
3,900,671	-		IAI47_18325	0.69	+0.1
3,900,671	-		IAI47_18325	0.69	-1.5
3,900,699	+		IAI47_18325	0.72	+0.1
3,900,699	+		IAI47_18325	0.72	-1.3
3,900,699	+		IAI47_18325	0.72	-2.1
3,900,699	+		IAI47_18325	0.72	-0.5
3,900,699	+		IAI47_18325	0.72	+0.3
3,900,700	-		IAI47_18325	0.72	+2.7
3,900,700	-		IAI47_18325	0.72	+1.3
3,900,700	-		IAI47_18325	0.72	-0.2
3,900,705	+		IAI47_18325	0.73	+1.3
3,900,705	+		IAI47_18325	0.73	-0.1
3,900,705	+		IAI47_18325	0.73	+2.0
3,900,705	+		IAI47_18325	0.73	-0.6
3,900,705	+		IAI47_18325	0.73	-0.7
3,900,705	+		IAI47_18325	0.73	+1.9
3,900,705	+		IAI47_18325	0.73	+0.2
3,900,705	+		IAI47_18325	0.73	-0.8
3,900,706	-		IAI47_18325	0.73	+2.5
3,900,706	-		IAI47_18325	0.73	-1.6
3,900,726	+		IAI47_18325	0.75	-0.6
3,900,726	+		IAI47_18325	0.75	-1.3
3,900,727	-		IAI47_18325	0.75	+0.3
3,900,727	-		IAI47_18325	0.75	-1.1
3,900,727	-		IAI47_18325	0.75	-0.1
3,900,727	-		IAI47_18325	0.75	-0.9
3,900,727	-		IAI47_18325	0.75	+1.4
3,900,727	-		IAI47_18325	0.75	-0.3
3,900,727	-		IAI47_18325	0.75	-0.9
3,900,727	-		IAI47_18325	0.75	-0.2
3,900,760	+		IAI47_18325	0.79	+1.0
3,900,760	+		IAI47_18325	0.79	-0.5
3,900,760	+		IAI47_18325	0.79	-0.4
3,900,760	+		IAI47_18325	0.79	-1.1
3,900,760	+		IAI47_18325	0.79	-1.1
3,900,760	+		IAI47_18325	0.79	-0.4
3,900,760	+		IAI47_18325	0.79	-1.1
3,900,760	+		IAI47_18325	0.79	-0.7
3,900,760	+		IAI47_18325	0.79	-0.3
3,900,760	+		IAI47_18325	0.79	+0.5
3,900,760	+		IAI47_18325	0.79	-1.1
3,900,760	+		IAI47_18325	0.79	-2.7
3,900,760	+		IAI47_18325	0.79	+1.0
3,900,761	-		IAI47_18325	0.79	-0.4
3,900,761	-		IAI47_18325	0.79	+0.7
3,900,761	-		IAI47_18325	0.79	+0.4
3,900,761	-		IAI47_18325	0.79	+0.2
3,900,761	-		IAI47_18325	0.79	+0.2
3,900,761	-		IAI47_18325	0.79	+0.0
3,900,761	-		IAI47_18325	0.79	+1.2
3,900,761	-		IAI47_18325	0.79	-0.6
3,900,762	+		IAI47_18325	0.79	-1.5
3,900,762	+		IAI47_18325	0.79	-2.9
3,900,762	+		IAI47_18325	0.79	-0.2
3,900,762	+		IAI47_18325	0.79	+1.1
3,900,762	+		IAI47_18325	0.79	+0.3
3,900,762	+		IAI47_18325	0.79	+1.7
3,900,762	+		IAI47_18325	0.79	-1.7
3,900,762	+		IAI47_18325	0.79	+1.8
3,900,762	+		IAI47_18325	0.79	-1.1
3,900,762	+		IAI47_18325	0.79	+1.1
3,900,763	-		IAI47_18325	0.79	-0.6
3,900,763	-		IAI47_18325	0.79	-1.5
3,900,763	-		IAI47_18325	0.79	+0.1
3,900,763	-		IAI47_18325	0.79	+2.6
3,900,763	-		IAI47_18325	0.79	-2.6
3,900,763	-		IAI47_18325	0.79	+1.7
3,900,763	-		IAI47_18325	0.79	-1.9
3,900,763	-		IAI47_18325	0.79	+2.6
3,900,863	+				-1.5
3,900,879	+				-0.9
3,900,879	+				+1.0
3,900,922	+				-0.2
3,900,922	+				+0.3
3,900,922	+				-2.2
3,900,922	+				-2.1
3,900,923	-				+0.7
3,900,925	+				-0.6
3,900,925	+				+1.7
3,900,925	+				-0.3
3,900,925	+				+0.9
3,900,925	+				-0.1
3,900,925	+				-1.4
3,900,926	-				+2.0
3,900,926	-				-0.3
3,900,926	-				+0.1
3,900,926	-				+2.7
3,900,926	-				-1.8
3,900,975	-				+0.9
3,901,001	-				+3.7
3,901,001	-				+1.4
3,901,062	-				-0.8
3,901,067	+				-2.2
3,901,068	-				+0.3
3,901,097	+				-1.7
3,901,098	-				+1.5
3,901,098	-				+2.8
3,901,098	-				-0.6
3,901,106	+				-3.1
3,901,106	+				-0.6
3,901,138	+				-1.6
3,901,139	-				+0.2
3,901,189	+				+0.7
3,901,189	+				-2.2
3,901,190	-				+1.4
3,901,190	-				+1.7
3,901,190	-				+0.4
3,901,203	+				+0.8
3,901,203	+				-2.3
3,901,203	+				+3.1
3,901,203	+				-0.6
3,901,203	+				+1.0
3,901,203	+				-1.6
3,901,203	+				+1.3
3,901,204	-				-0.6
3,901,204	-				-1.3
3,901,204	-				+0.6
3,901,204	-				-1.9
3,901,204	-				+0.2
3,901,204	-				+2.4
3,901,210	-				-1.1
3,901,282	-				+0.2
3,901,292	-				-0.6
3,901,292	-				+0.6
3,901,382	+				-2.2
3,901,382	+				-0.4
3,901,383	-				-1.3
3,901,436	+				-1.3
3,901,436	+				+2.7
3,901,436	+				+1.3
3,901,436	+				+1.0
3,901,436	+				-0.9
3,901,436	+				+1.0
3,901,437	-				-0.5
3,901,439	+				-2.6
3,901,439	+				+0.5
3,901,440	-				-0.7
3,901,440	-				+0.6
3,901,440	-				-2.6
3,901,440	-				+0.7
3,901,440	-				+0.1
3,901,440	-				-1.3
3,901,440	-				+0.2
3,901,475	+		IAI47_18330	0.12	+0.6
3,901,476	-		IAI47_18330	0.12	-1.0
3,901,476	-		IAI47_18330	0.12	+0.4
3,901,541	+		IAI47_18330	0.17	-2.3
3,901,541	+		IAI47_18330	0.17	-0.5
3,901,689	+		IAI47_18330	0.28	-0.6
3,901,689	+		IAI47_18330	0.28	-2.4
3,901,689	+		IAI47_18330	0.28	-1.1
3,901,689	+		IAI47_18330	0.28	-0.8
3,901,689	+		IAI47_18330	0.28	-1.1
3,901,690	-		IAI47_18330	0.28	-1.1
3,901,690	-		IAI47_18330	0.28	-1.2
3,901,811	-		IAI47_18330	0.37	+0.6
3,901,811	-		IAI47_18330	0.37	-2.3
3,901,811	-		IAI47_18330	0.37	-1.8
3,901,815	+		IAI47_18330	0.37	-3.1
3,901,815	+		IAI47_18330	0.37	+0.3
3,901,815	+		IAI47_18330	0.37	-0.8
3,901,816	-		IAI47_18330	0.37	-2.2
3,901,825	+		IAI47_18330	0.38	-0.5
3,901,853	-		IAI47_18330	0.40	-3.0
3,901,886	+		IAI47_18330	0.43	-0.5
3,901,886	+		IAI47_18330	0.43	-2.5
3,901,886	+		IAI47_18330	0.43	-1.8
3,901,886	+		IAI47_18330	0.43	-0.7
3,901,886	+		IAI47_18330	0.43	-0.0
3,901,886	+		IAI47_18330	0.43	-1.1
3,901,886	+		IAI47_18330	0.43	+2.0
3,901,886	+		IAI47_18330	0.43	-0.6
3,901,886	+		IAI47_18330	0.43	+0.5
3,901,887	-		IAI47_18330	0.43	-0.5
3,901,887	-		IAI47_18330	0.43	-0.5
3,901,887	-		IAI47_18330	0.43	-1.2
3,901,887	-		IAI47_18330	0.43	-1.2
3,901,887	-		IAI47_18330	0.43	+0.7
3,901,887	-		IAI47_18330	0.43	-0.2
3,901,887	-		IAI47_18330	0.43	+2.5
3,901,912	+		IAI47_18330	0.44	-0.5
3,901,912	+		IAI47_18330	0.44	-1.1
3,901,913	-		IAI47_18330	0.45	+1.9
3,901,913	-		IAI47_18330	0.45	-0.7
3,901,982	+		IAI47_18330	0.50	-1.2
3,901,995	-		IAI47_18330	0.51	+0.1
3,902,006	+		IAI47_18330	0.51	+1.0
3,902,006	+		IAI47_18330	0.51	-0.2
3,902,006	+		IAI47_18330	0.51	-0.9
3,902,006	+		IAI47_18330	0.51	-0.4
3,902,006	+		IAI47_18330	0.51	-0.8
3,902,006	+		IAI47_18330	0.51	-0.7
3,902,007	-		IAI47_18330	0.52	-2.3
3,902,057	+		IAI47_18330	0.55	-0.3
3,902,057	+		IAI47_18330	0.55	-1.6
3,902,057	+		IAI47_18330	0.55	+3.0
3,902,057	+		IAI47_18330	0.55	-2.4
3,902,057	+		IAI47_18330	0.55	+0.9
3,902,058	-		IAI47_18330	0.55	+1.3
3,902,058	-		IAI47_18330	0.55	+0.1
3,902,058	-		IAI47_18330	0.55	-2.6
3,902,058	-		IAI47_18330	0.55	+0.5
3,902,058	-		IAI47_18330	0.55	-0.7
3,902,058	-		IAI47_18330	0.55	+0.9
3,902,058	-		IAI47_18330	0.55	-2.0
3,902,058	-		IAI47_18330	0.55	+1.6
3,902,058	-		IAI47_18330	0.55	-1.3
3,902,058	-		IAI47_18330	0.55	+0.1
3,902,058	-		IAI47_18330	0.55	+0.8
3,902,084	+		IAI47_18330	0.57	+1.2
3,902,084	+		IAI47_18330	0.57	-0.4
3,902,084	+		IAI47_18330	0.57	+0.1
3,902,084	+		IAI47_18330	0.57	-0.7
3,902,084	+		IAI47_18330	0.57	+0.6
3,902,084	+		IAI47_18330	0.57	+0.4
3,902,085	-		IAI47_18330	0.57	-2.2
3,902,111	+		IAI47_18330	0.59	-0.6
3,902,111	+		IAI47_18330	0.59	+0.7
3,902,111	+		IAI47_18330	0.59	-0.8
3,902,111	+		IAI47_18330	0.59	-0.1
3,902,150	+		IAI47_18330	0.62	-0.2
3,902,151	-		IAI47_18330	0.62	+1.1
3,902,151	-		IAI47_18330	0.62	+0.5
3,902,151	-		IAI47_18330	0.62	+0.2
3,902,163	+		IAI47_18330	0.63	+0.3
3,902,164	-		IAI47_18330	0.63	-1.1
3,902,182	+		IAI47_18330	0.65	-2.1
3,902,183	-		IAI47_18330	0.65	-1.4
3,902,198	+		IAI47_18330	0.66	+0.6
3,902,199	-		IAI47_18330	0.66	-1.9
3,902,199	-		IAI47_18330	0.66	-1.5
3,902,207	+		IAI47_18330	0.66	+0.6
3,902,207	+		IAI47_18330	0.66	+0.7
3,902,207	+		IAI47_18330	0.66	+1.5
3,902,207	+		IAI47_18330	0.66	-1.1
3,902,207	+		IAI47_18330	0.66	-0.5
3,902,207	+		IAI47_18330	0.66	-0.8
3,902,207	+		IAI47_18330	0.66	+1.8
3,902,207	+		IAI47_18330	0.66	-0.9
3,902,207	+		IAI47_18330	0.66	-1.8
3,902,207	+		IAI47_18330	0.66	-1.7
3,902,207	+		IAI47_18330	0.66	-2.5
3,902,207	+		IAI47_18330	0.66	+0.7
3,902,207	+		IAI47_18330	0.66	+0.1
3,902,207	+		IAI47_18330	0.66	-0.7
3,902,207	+		IAI47_18330	0.66	-0.4
3,902,207	+		IAI47_18330	0.66	-0.4
3,902,208	-		IAI47_18330	0.67	+0.3
3,902,208	-		IAI47_18330	0.67	-0.3
3,902,208	-		IAI47_18330	0.67	+1.0
3,902,208	-		IAI47_18330	0.67	-1.9
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