Strain Fitness in Pantoea sp. MT58 around IAI47_14170

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,993,733	+		IAI47_14160	0.80	-2.2
2,993,734	-		IAI47_14160	0.80	+1.7
2,993,734	-		IAI47_14160	0.80	-0.9
2,993,734	-		IAI47_14160	0.80	+0.3
2,993,739	+		IAI47_14160	0.81	+1.7
2,993,739	+		IAI47_14160	0.81	-0.1
2,993,739	+		IAI47_14160	0.81	+1.5
2,993,739	+		IAI47_14160	0.81	-0.2
2,993,821	+				-0.3
2,993,821	+				+0.5
2,993,821	+				-2.5
2,993,821	+				-1.2
2,993,822	-				+1.4
2,993,822	-				+0.7
2,993,822	-				+1.4
2,993,822	-				-0.3
2,993,822	-				+1.3
2,993,822	-				+1.7
2,993,822	-				-0.3
2,993,822	-				-1.5
2,993,824	+				-1.2
2,993,824	+				-1.0
2,993,824	+				-0.7
2,993,824	+				+1.9
2,993,825	-				-0.3
2,993,825	-				-1.1
2,993,837	+				-0.0
2,993,837	+				+0.3
2,993,837	+				-0.4
2,993,837	+				+0.1
2,993,837	+				-2.4
2,993,838	-				+0.3
2,993,838	-				+0.5
2,993,838	-				+1.6
2,993,838	-				-0.6
2,993,841	+				-0.4
2,993,841	+				+0.3
2,993,841	+				-1.9
2,993,841	+				+0.4
2,993,841	+				-0.6
2,993,842	-				-0.9
2,993,842	-				-1.2
2,993,842	-				-0.9
2,993,842	-				-0.5
2,993,842	-				-2.0
2,993,855	+				+0.8
2,993,855	+				+0.4
2,993,855	+				-2.1
2,993,856	-				+2.7
2,993,856	-				+2.7
2,993,856	-				+3.4
2,993,856	-				-2.2
2,993,856	-				-1.9
2,993,930	+		IAI47_14165	0.37	+0.2
2,993,930	+		IAI47_14165	0.37	+1.0
2,993,930	+		IAI47_14165	0.37	+1.0
2,993,930	+		IAI47_14165	0.37	-1.8
2,993,930	+		IAI47_14165	0.37	+0.4
2,993,930	+		IAI47_14165	0.37	+0.3
2,993,930	+		IAI47_14165	0.37	-0.5
2,993,930	+		IAI47_14165	0.37	-1.2
2,993,930	+		IAI47_14165	0.37	-0.4
2,993,930	+		IAI47_14165	0.37	+1.3
2,993,930	+		IAI47_14165	0.37	-0.3
2,993,931	-		IAI47_14165	0.37	+1.6
2,993,931	-		IAI47_14165	0.37	-1.9
2,993,931	-		IAI47_14165	0.37	+0.5
2,993,931	-		IAI47_14165	0.37	+0.1
2,993,931	-		IAI47_14165	0.37	-0.2
2,993,953	-		IAI47_14165	0.45	+0.4
2,993,958	+		IAI47_14165	0.47	-0.7
2,993,958	+		IAI47_14165	0.47	+0.9
2,993,958	+		IAI47_14165	0.47	+1.1
2,993,958	+		IAI47_14165	0.47	-1.7
2,993,959	-		IAI47_14165	0.47	-1.4
2,993,959	-		IAI47_14165	0.47	-0.5
2,993,959	-		IAI47_14165	0.47	-0.1
2,994,012	+		IAI47_14165	0.67	-1.7
2,994,130	+				-0.5
2,994,130	+				-0.6
2,994,130	+				+1.4
2,994,131	-				-1.2
2,994,131	-				-0.1
2,994,131	-				+0.5
2,994,139	+				-0.2
2,994,139	+				-1.0
2,994,139	+				-0.3
2,994,140	-				-0.8
2,994,140	-				-1.5
2,994,140	-				-0.8
2,994,150	+				+1.7
2,994,151	-				-1.3
2,994,151	-				-0.4
2,994,156	+				+0.1
2,994,157	-				+0.2
2,994,157	-				+0.9
2,994,157	-				-1.6
2,994,157	-				+0.1
2,994,157	-				+1.2
2,994,160	+				-0.0
2,994,160	+				-0.3
2,994,160	+				+1.5
2,994,160	+				-0.4
2,994,161	-				-0.5
2,994,178	-				-2.5
2,994,181	+				-0.3
2,994,181	+				-0.9
2,994,181	+				-0.8
2,994,182	-				-1.1
2,994,182	-				+0.2
2,994,182	-				+0.0
2,994,182	-				+1.4
2,994,237	+				-0.7
2,994,237	+				-2.4
2,994,238	-				-0.6
2,994,238	-				+1.3
2,994,238	-				-1.9
2,994,238	-				+0.8
2,994,238	-				+1.6
2,994,238	-				+1.0
2,994,238	-				-0.3
2,994,298	+				-1.7
2,994,299	-				-1.1
2,994,309	-				-0.0
2,994,312	+				-0.5
2,994,312	+				-0.9
2,994,313	-				-1.0
2,994,318	+				+0.3
2,994,380	+				+1.8
2,994,380	+				+1.5
2,994,380	+				+0.3
2,994,380	+				-0.4
2,994,380	+				+1.8
2,994,380	+				-1.3
2,994,381	-				+0.2
2,994,381	-				+0.9
2,994,436	-				+2.7
2,994,436	-				-1.6
2,994,436	-				+2.8
2,994,436	-				-1.1
2,994,436	-				+0.2
2,994,448	+				+0.2
2,994,448	+				+0.5
2,994,449	-				-2.0
2,994,449	-				+2.2
2,994,468	+				-2.6
2,994,468	+				+0.7
2,994,468	+				+0.0
2,994,469	-				+1.3
2,994,489	+				+0.0
2,994,489	+				-2.0
2,994,489	+				-0.4
2,994,489	+				-0.3
2,994,489	+				-0.7
2,994,489	+				+0.5
2,994,490	-				+1.9
2,994,490	-				+1.6
2,994,490	-				-0.8
2,994,490	-				-3.0
2,994,512	-				+1.0
2,994,512	-				+0.7
2,994,538	+				-1.4
2,994,578	+				-2.5
2,994,579	-				+1.3
2,994,579	-				-0.7
2,994,579	-				+0.7
2,994,606	-		IAI47_14170	0.12	-0.6
2,994,612	+		IAI47_14170	0.15	+2.4
2,994,612	+		IAI47_14170	0.15	-0.5
2,994,613	-		IAI47_14170	0.15	-1.3
2,994,613	-		IAI47_14170	0.15	-0.2
2,994,712	+		IAI47_14170	0.58	-0.5
2,994,714	+		IAI47_14170	0.59	-1.3
2,994,715	-		IAI47_14170	0.59	-0.8
2,994,783	-		IAI47_14170	0.88	-0.5
2,994,783	-		IAI47_14170	0.88	-0.1
2,994,789	+				-2.0
2,994,789	+				-0.7
2,994,789	+				-1.5
2,994,789	+				+0.3
2,994,789	+				+1.7
2,994,790	-				-0.8
2,994,790	-				+0.2
2,994,790	-				-1.6
2,994,790	-				-1.0
2,994,790	-				-0.3
2,994,790	-				+0.3
2,994,799	-				-0.1
2,994,813	+				+0.8
2,994,814	-				+1.6
2,994,825	+				+1.3
2,994,826	-				-2.2
2,994,826	-				+0.4
2,994,826	-				+1.7
2,994,833	+				+0.3
2,994,834	-				+0.7
2,994,834	-				+0.6
2,994,846	+				-1.4
2,994,846	+				-0.4
2,994,846	+				+1.2
2,994,847	-				-0.0
2,994,847	-				-0.4
2,994,867	+				-1.6
2,994,868	-				-0.6
2,994,868	-				+0.8
2,994,868	-				-3.0
2,994,911	+				+0.8
2,994,911	+				-0.0
2,994,911	+				+0.2
2,994,911	+				-0.5
2,994,911	+				+3.5
2,994,911	+				-1.3
2,994,911	+				-0.2
2,994,911	+				+0.1
2,994,911	+				-1.7
2,994,911	+				+0.5
2,994,911	+				+1.8
2,994,911	+				+0.1
2,994,912	-				-1.4
2,994,912	-				+1.4
2,994,912	-				-0.4
2,994,912	-				+1.6
2,994,912	-				-2.6
2,994,912	-				+0.1
2,994,931	-				-0.5
2,995,042	+				+0.2
2,995,042	+				-0.7
2,995,043	-				-1.2
2,995,052	+				+1.0
2,995,052	+				+0.7
2,995,053	-				-0.5
2,995,053	-				+0.4
2,995,190	+				-0.8
2,995,190	+				+0.1
2,995,190	+				-0.4
2,995,190	+				+0.9
2,995,190	+				-0.1
2,995,190	+				-0.7
2,995,190	+				+0.3
2,995,190	+				-1.4
2,995,190	+				-1.0
2,995,191	-				+2.0
2,995,191	-				+0.7
2,995,191	-				+0.1
2,995,232	+		IAI47_14175	0.13	+0.2
2,995,232	+		IAI47_14175	0.13	-2.1
2,995,232	+		IAI47_14175	0.13	-0.1
2,995,232	+		IAI47_14175	0.13	+1.2
2,995,232	+		IAI47_14175	0.13	+0.7
2,995,232	+		IAI47_14175	0.13	+1.1
2,995,232	+		IAI47_14175	0.13	+0.5
2,995,232	+		IAI47_14175	0.13	-0.7
2,995,233	-		IAI47_14175	0.13	+2.9
2,995,233	-		IAI47_14175	0.13	+1.0
2,995,233	-		IAI47_14175	0.13	+0.4
2,995,233	-		IAI47_14175	0.13	-1.3
2,995,233	-		IAI47_14175	0.13	-0.5
2,995,233	-		IAI47_14175	0.13	+0.3
2,995,233	-		IAI47_14175	0.13	-1.0
2,995,233	-		IAI47_14175	0.13	+0.5
2,995,233	-		IAI47_14175	0.13	+1.3
2,995,244	-		IAI47_14175	0.14	-0.1
2,995,244	-		IAI47_14175	0.14	+2.1
2,995,244	-		IAI47_14175	0.14	-2.5
2,995,362	+		IAI47_14175	0.26	+0.5
2,995,362	+		IAI47_14175	0.26	-0.5
2,995,362	+		IAI47_14175	0.26	-1.7
2,995,363	-		IAI47_14175	0.26	+1.4
2,995,363	-		IAI47_14175	0.26	-1.2
2,995,363	-		IAI47_14175	0.26	-0.9
2,995,378	+		IAI47_14175	0.28	+0.6
2,995,379	-		IAI47_14175	0.28	+1.1
2,995,402	+		IAI47_14175	0.30	-2.0
2,995,402	+		IAI47_14175	0.30	-3.5
2,995,402	+		IAI47_14175	0.30	+2.7
2,995,403	-		IAI47_14175	0.31	+0.4
2,995,403	-		IAI47_14175	0.31	+0.1
2,995,403	-		IAI47_14175	0.31	-2.7
2,995,403	-		IAI47_14175	0.31	-1.7
2,995,414	-		IAI47_14175	0.32	-0.8
2,995,414	-		IAI47_14175	0.32	+1.0
2,995,415	+		IAI47_14175	0.32	-0.4
2,995,415	+		IAI47_14175	0.32	+1.8
2,995,415	+		IAI47_14175	0.32	+0.7
2,995,415	+		IAI47_14175	0.32	+0.6
2,995,415	+		IAI47_14175	0.32	+0.6
2,995,415	+		IAI47_14175	0.32	+1.2
2,995,415	+		IAI47_14175	0.32	-1.5
2,995,415	+		IAI47_14175	0.32	-2.7
2,995,416	-		IAI47_14175	0.32	-1.6
2,995,416	-		IAI47_14175	0.32	+0.7
2,995,416	-		IAI47_14175	0.32	+1.2
2,995,416	-		IAI47_14175	0.32	-0.2
2,995,529	+		IAI47_14175	0.44	-0.7
2,995,530	-		IAI47_14175	0.44	+1.7
2,995,566	+		IAI47_14175	0.47	-0.8
2,995,566	+		IAI47_14175	0.47	-0.8
2,995,625	+		IAI47_14175	0.54	-1.2
2,995,626	-		IAI47_14175	0.54	-1.8
2,995,626	-		IAI47_14175	0.54	+0.1
2,995,655	+		IAI47_14175	0.57	+0.9
2,995,655	+		IAI47_14175	0.57	-1.7
2,995,664	+		IAI47_14175	0.58	+3.4
2,995,724	+		IAI47_14175	0.64	+0.2
2,995,803	+		IAI47_14175	0.72	+1.1
2,995,803	+		IAI47_14175	0.72	+0.9
2,995,803	+		IAI47_14175	0.72	+0.1
2,995,804	-		IAI47_14175	0.72	-0.2
2,995,804	-		IAI47_14175	0.72	+1.5
2,995,804	-		IAI47_14175	0.72	-1.7
2,995,804	-		IAI47_14175	0.72	+0.5
2,995,804	-		IAI47_14175	0.72	+0.1