Strain Fitness in Pantoea sp. MT58 around IAI47_11810

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,505,004	+		IAI47_11805	0.36	-2.4
2,505,005	-		IAI47_11805	0.36	-0.5
2,505,017	-		IAI47_11805	0.36	-0.7
2,505,017	-		IAI47_11805	0.36	-0.1
2,505,017	-		IAI47_11805	0.36	+0.8
2,505,042	+		IAI47_11805	0.38	+3.5
2,505,043	-		IAI47_11805	0.38	-1.1
2,505,043	-		IAI47_11805	0.38	-0.1
2,505,043	-		IAI47_11805	0.38	+2.5
2,505,043	-		IAI47_11805	0.38	-2.5
2,505,105	+		IAI47_11805	0.42	-1.6
2,505,105	+		IAI47_11805	0.42	+1.4
2,505,105	+		IAI47_11805	0.42	+0.0
2,505,105	+		IAI47_11805	0.42	+1.7
2,505,106	-		IAI47_11805	0.42	-0.3
2,505,106	-		IAI47_11805	0.42	-0.7
2,505,106	-		IAI47_11805	0.42	-0.1
2,505,137	-		IAI47_11805	0.44	-0.5
2,505,160	+		IAI47_11805	0.46	+0.6
2,505,160	+		IAI47_11805	0.46	+1.9
2,505,161	-		IAI47_11805	0.46	-0.8
2,505,161	-		IAI47_11805	0.46	-2.3
2,505,341	-		IAI47_11805	0.58	-0.7
2,505,341	-		IAI47_11805	0.58	+1.1
2,505,385	+		IAI47_11805	0.61	-1.4
2,505,385	+		IAI47_11805	0.61	-0.6
2,505,385	+		IAI47_11805	0.61	+1.3
2,505,386	-		IAI47_11805	0.61	-0.7
2,505,387	+		IAI47_11805	0.61	+0.7
2,505,388	-		IAI47_11805	0.61	-0.0
2,505,388	-		IAI47_11805	0.61	+0.1
2,505,397	+		IAI47_11805	0.62	-1.3
2,505,578	-		IAI47_11805	0.73	-0.7
2,505,578	-		IAI47_11805	0.73	+0.5
2,505,691	+		IAI47_11805	0.81	+0.3
2,505,965	-				-1.3
2,505,965	-				+0.3
2,506,142	+		IAI47_11810	0.27	-0.2
2,506,142	+		IAI47_11810	0.27	-0.1
2,506,142	+		IAI47_11810	0.27	-0.4
2,506,143	-		IAI47_11810	0.27	+1.7
2,506,158	+		IAI47_11810	0.30	+1.1
2,506,158	+		IAI47_11810	0.30	-1.5
2,506,240	-		IAI47_11810	0.43	-1.5
2,506,245	+		IAI47_11810	0.44	+0.2
2,506,278	+		IAI47_11810	0.50	+0.2
2,506,278	+		IAI47_11810	0.50	-0.6
2,506,279	-		IAI47_11810	0.50	-0.1
2,506,407	+		IAI47_11810	0.71	-2.0
2,506,407	+		IAI47_11810	0.71	-1.0
2,506,458	+		IAI47_11810	0.80	-0.3
2,506,458	+		IAI47_11810	0.80	+1.1
2,506,458	+		IAI47_11810	0.80	+0.2
2,506,459	-		IAI47_11810	0.80	-1.9
2,506,459	-		IAI47_11810	0.80	-0.6
2,506,460	+		IAI47_11810	0.80	-0.5
2,506,460	+		IAI47_11810	0.80	+0.1
2,506,460	+		IAI47_11810	0.80	-0.1
2,506,461	-		IAI47_11810	0.80	-0.6
2,506,461	-		IAI47_11810	0.80	-1.0
2,506,461	-		IAI47_11810	0.80	-0.8
2,506,461	-		IAI47_11810	0.80	-0.5
2,506,461	-		IAI47_11810	0.80	+0.4
2,506,461	-		IAI47_11810	0.80	+1.9
2,506,500	+		IAI47_11810	0.87	-0.8
2,506,558	+				-1.6
2,506,559	-				-2.3
2,506,567	+				-0.7
2,506,568	-				-1.1
2,506,568	-				+2.7
2,506,568	-				-0.8
2,506,569	+				-1.5
2,506,569	+				-0.7
2,506,569	+				-2.7
2,506,569	+				-0.6
2,506,569	+				-0.7
2,506,569	+				+1.0
2,506,570	-				-0.4
2,506,570	-				-0.4
2,506,582	+				-0.0
2,506,582	+				-2.0
2,506,583	-				+1.1
2,506,583	-				+0.4
2,506,687	+		IAI47_11815	0.11	-0.9
2,506,687	+		IAI47_11815	0.11	-1.0
2,506,688	-		IAI47_11815	0.11	-0.8
2,506,690	+		IAI47_11815	0.12	+1.0
2,506,690	+		IAI47_11815	0.12	+2.1
2,506,691	-		IAI47_11815	0.12	-1.5
2,506,691	-		IAI47_11815	0.12	-1.6
2,506,691	-		IAI47_11815	0.12	-2.4
2,506,754	+		IAI47_11815	0.18	-0.6
2,506,754	+		IAI47_11815	0.18	-0.2
2,506,786	+		IAI47_11815	0.22	-0.2
2,506,988	+		IAI47_11815	0.43	-1.1
2,506,988	+		IAI47_11815	0.43	-1.5
2,506,988	+		IAI47_11815	0.43	-1.7
2,506,989	-		IAI47_11815	0.43	-0.5
2,506,989	-		IAI47_11815	0.43	-0.7
2,506,989	-		IAI47_11815	0.43	+0.5
2,506,990	+		IAI47_11815	0.43	+0.2
2,506,990	+		IAI47_11815	0.43	+1.7
2,506,990	+		IAI47_11815	0.43	+0.7
2,506,991	-		IAI47_11815	0.44	-0.7
2,506,991	-		IAI47_11815	0.44	+0.3
2,506,991	-		IAI47_11815	0.44	+0.3
2,507,001	+		IAI47_11815	0.45	+1.4
2,507,001	+		IAI47_11815	0.45	+0.7
2,507,002	-		IAI47_11815	0.45	-0.5
2,507,002	-		IAI47_11815	0.45	-1.4
2,507,002	-		IAI47_11815	0.45	+0.1
2,507,039	+		IAI47_11815	0.49	+0.9
2,507,039	+		IAI47_11815	0.49	+1.7
2,507,040	-		IAI47_11815	0.49	+0.3
2,507,068	+		IAI47_11815	0.52	-1.0
2,507,068	-		IAI47_11815	0.52	+1.6
2,507,069	-		IAI47_11815	0.52	-1.5
2,507,069	-		IAI47_11815	0.52	-0.8
2,507,069	-		IAI47_11815	0.52	+0.3
2,507,069	-		IAI47_11815	0.52	+0.0
2,507,069	-		IAI47_11815	0.52	+1.3
2,507,128	+		IAI47_11815	0.58	+0.1
2,507,128	+		IAI47_11815	0.58	-1.7
2,507,129	-		IAI47_11815	0.58	+0.8
2,507,129	-		IAI47_11815	0.58	-1.1
2,507,132	+		IAI47_11815	0.58	-1.6
2,507,132	+		IAI47_11815	0.58	-0.8
2,507,132	+		IAI47_11815	0.58	-1.8
2,507,132	+		IAI47_11815	0.58	+0.3
2,507,132	+		IAI47_11815	0.58	-1.0
2,507,133	-		IAI47_11815	0.59	+0.8
2,507,133	-		IAI47_11815	0.59	+0.1
2,507,133	-		IAI47_11815	0.59	-2.3
2,507,133	-		IAI47_11815	0.59	-0.8
2,507,133	-		IAI47_11815	0.59	-1.2
2,507,171	+		IAI47_11815	0.63	-1.8
2,507,315	+		IAI47_11815	0.78	-1.5
2,507,318	+		IAI47_11815	0.78	-0.8
2,507,318	+		IAI47_11815	0.78	-1.7
2,507,318	+		IAI47_11815	0.78	-0.8
2,507,318	+		IAI47_11815	0.78	-0.9
2,507,318	+		IAI47_11815	0.78	-0.5
2,507,318	+		IAI47_11815	0.78	-0.3
2,507,319	-		IAI47_11815	0.78	-0.5
2,507,319	-		IAI47_11815	0.78	-2.1
2,507,319	-		IAI47_11815	0.78	+2.0
2,507,319	-		IAI47_11815	0.78	-0.5
2,507,319	-		IAI47_11815	0.78	+0.1
2,507,319	-		IAI47_11815	0.78	-0.5
2,507,353	+		IAI47_11815	0.82	+0.7
2,507,353	+		IAI47_11815	0.82	+0.8
2,507,354	-		IAI47_11815	0.82	-2.7
2,507,399	+		IAI47_11815	0.87	+0.5
2,507,400	-		IAI47_11815	0.87	-0.5
2,507,429	+				+0.9
2,507,429	+				-0.7
2,507,429	+				+0.7
2,507,430	-				+0.4
2,507,504	+				-1.2
2,507,523	+				-1.1
2,507,523	+				+3.3
2,507,524	-				-0.7
2,507,524	-				-0.8
2,507,527	-				-0.8
2,507,527	-				+0.1
2,507,527	-				-0.1
2,507,527	-				+0.8
2,507,541	+				+0.2
2,507,576	+				-0.4
2,507,577	-				-0.6