Strain Fitness in Pantoea sp. MT58 around IAI47_08735

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,846,396	+		IAI47_08720	0.73	-1.2
1,846,397	-		IAI47_08720	0.74	+1.0
1,846,407	+		IAI47_08720	0.75	-0.4
1,846,488	+		IAI47_08720	0.85	+0.0
1,846,488	+		IAI47_08720	0.85	-1.1
1,846,488	+		IAI47_08720	0.85	-0.2
1,846,488	+		IAI47_08720	0.85	-0.6
1,846,488	+		IAI47_08720	0.85	+0.5
1,846,488	+		IAI47_08720	0.85	-0.3
1,846,489	-		IAI47_08720	0.85	-1.7
1,846,489	-		IAI47_08720	0.85	-0.3
1,846,489	-		IAI47_08720	0.85	-2.1
1,846,489	-		IAI47_08720	0.85	+2.4
1,846,534	+				-0.3
1,846,534	+				+0.4
1,846,631	+				+1.8
1,846,631	+				-0.9
1,846,631	+				-1.2
1,846,631	+				-0.9
1,846,631	+				+0.5
1,846,632	-				+0.1
1,846,632	-				-1.6
1,846,632	-				+2.5
1,846,634	+				+0.0
1,846,634	+				-0.4
1,846,634	+				-1.2
1,846,637	+				+3.0
1,846,637	+				-0.6
1,846,637	+				-0.5
1,846,637	+				+1.2
1,846,637	+				-0.4
1,846,637	+				+1.9
1,846,637	+				-1.3
1,846,637	+				+1.8
1,846,637	+				-0.4
1,846,637	+				+0.4
1,846,637	+				+0.1
1,846,637	+				+0.0
1,846,638	-				+0.1
1,846,638	-				+1.2
1,846,638	-				+1.7
1,846,638	-				-0.9
1,846,638	-				-1.6
1,846,638	-				+1.1
1,846,638	-				-1.3
1,846,638	-				-1.5
1,846,638	-				+0.9
1,846,642	-				+0.1
1,846,644	-				-2.5
1,846,693	+		IAI47_08725	0.24	-0.2
1,846,693	+		IAI47_08725	0.24	+0.6
1,846,693	+		IAI47_08725	0.24	-2.3
1,846,693	+		IAI47_08725	0.24	-1.2
1,846,694	-		IAI47_08725	0.24	+2.7
1,846,715	+		IAI47_08725	0.33	+1.1
1,846,715	+		IAI47_08725	0.33	+0.4
1,846,715	+		IAI47_08725	0.33	-1.3
1,846,716	-		IAI47_08725	0.34	+0.7
1,846,716	-		IAI47_08725	0.34	-0.9
1,846,716	-		IAI47_08725	0.34	-1.2
1,846,748	+		IAI47_08725	0.47	+0.9
1,846,748	+		IAI47_08725	0.47	-0.5
1,846,748	+		IAI47_08725	0.47	+0.1
1,846,783	-		IAI47_08725	0.62	+0.4
1,846,798	+		IAI47_08725	0.68	-0.4
1,846,798	+		IAI47_08725	0.68	-0.1
1,846,799	-		IAI47_08725	0.69	-1.5
1,846,799	-		IAI47_08725	0.69	+0.8
1,846,849	+				-0.1
1,846,850	-				+0.1
1,846,850	-				+0.4
1,846,873	+				-0.6
1,846,873	+				-0.2
1,846,873	+				-1.5
1,846,873	+				+1.6
1,846,874	-				-1.6
1,846,874	-				-1.0
1,846,874	-				-1.0
1,846,874	-				-0.1
1,846,874	-				-0.3
1,846,892	+				+0.9
1,846,892	+				-1.6
1,846,892	+				+0.6
1,846,923	-				+1.4
1,846,930	+				+1.2
1,846,931	-				+1.0
1,846,970	+				-0.3
1,846,970	+				-0.1
1,847,010	-				-0.5
1,847,026	-				+0.8
1,847,032	-				+0.1
1,847,063	+				+1.7
1,847,074	+				-1.1
1,847,086	-				+1.1
1,847,114	+		IAI47_08730	0.14	-0.7
1,847,114	+		IAI47_08730	0.14	+0.5
1,847,114	+		IAI47_08730	0.14	-0.9
1,847,130	+		IAI47_08730	0.20	-2.2
1,847,131	+		IAI47_08730	0.21	+0.8
1,847,131	+		IAI47_08730	0.21	-1.0
1,847,136	+		IAI47_08730	0.22	+0.5
1,847,136	+		IAI47_08730	0.22	+0.3
1,847,137	-		IAI47_08730	0.23	-2.0
1,847,205	+		IAI47_08730	0.48	+1.7
1,847,206	-		IAI47_08730	0.48	+0.7
1,847,346	-				-1.6
1,847,387	+				+0.5
1,847,388	-				+2.0
1,847,388	-				+1.9
1,847,388	-				-1.7
1,847,410	+				-0.3
1,847,411	-				-1.4
1,847,411	-				-1.1
1,847,411	-				-0.4
1,847,411	-				+1.7
1,847,411	-				-1.5
1,847,428	+				+0.4
1,847,428	+				+0.9
1,847,428	+				+1.9
1,847,429	-				-2.0
1,847,429	-				+1.1
1,847,486	-		IAI47_08735	0.12	+2.3
1,847,486	-		IAI47_08735	0.12	-2.6
1,847,523	-		IAI47_08735	0.16	+0.4
1,847,630	+		IAI47_08735	0.26	+0.7
1,847,630	+		IAI47_08735	0.26	+2.1
1,847,630	+		IAI47_08735	0.26	-2.3
1,847,630	+		IAI47_08735	0.26	-0.8
1,847,630	+		IAI47_08735	0.26	-0.3
1,847,630	+		IAI47_08735	0.26	-0.6
1,847,630	+		IAI47_08735	0.26	-0.8
1,847,630	+		IAI47_08735	0.26	-0.3
1,847,630	+		IAI47_08735	0.26	+0.6
1,847,631	-		IAI47_08735	0.26	-2.5
1,847,631	-		IAI47_08735	0.26	+0.4
1,847,631	-		IAI47_08735	0.26	-1.0
1,847,631	-		IAI47_08735	0.26	-1.8
1,847,631	-		IAI47_08735	0.26	+0.7
1,847,631	-		IAI47_08735	0.26	-0.8
1,847,631	-		IAI47_08735	0.26	-2.8
1,847,631	-		IAI47_08735	0.26	+1.3
1,847,631	-		IAI47_08735	0.26	+0.9
1,847,631	-		IAI47_08735	0.26	-0.8
1,847,631	-		IAI47_08735	0.26	-1.0
1,847,631	-		IAI47_08735	0.26	+0.5
1,847,632	+		IAI47_08735	0.26	-0.9
1,847,632	+		IAI47_08735	0.26	+0.1
1,847,632	+		IAI47_08735	0.26	-1.5
1,847,632	+		IAI47_08735	0.26	-0.8
1,847,632	+		IAI47_08735	0.26	-0.8
1,847,632	+		IAI47_08735	0.26	+1.5
1,847,633	-		IAI47_08735	0.26	+3.1
1,847,633	-		IAI47_08735	0.26	+1.0
1,847,717	-		IAI47_08735	0.35	-0.3
1,847,717	-		IAI47_08735	0.35	-0.1
1,847,758	+		IAI47_08735	0.39	+1.8
1,847,759	-		IAI47_08735	0.39	+1.6
1,847,759	-		IAI47_08735	0.39	-0.7
1,847,766	-		IAI47_08735	0.40	-0.9
1,847,766	-		IAI47_08735	0.40	-0.6
1,847,797	+		IAI47_08735	0.43	-0.3
1,847,797	+		IAI47_08735	0.43	-0.5
1,847,797	+		IAI47_08735	0.43	-1.8
1,847,797	+		IAI47_08735	0.43	+0.1
1,847,798	-		IAI47_08735	0.43	+1.0
1,847,798	-		IAI47_08735	0.43	+0.3
1,847,798	-		IAI47_08735	0.43	+1.3
1,847,798	-		IAI47_08735	0.43	-1.0
1,847,798	-		IAI47_08735	0.43	+0.3
1,847,827	+		IAI47_08735	0.46	-0.2
1,847,827	+		IAI47_08735	0.46	-0.5
1,847,827	+		IAI47_08735	0.46	-0.2
1,847,828	-		IAI47_08735	0.46	-1.5
1,847,848	+		IAI47_08735	0.48	-0.2
1,847,849	-		IAI47_08735	0.48	-1.5
1,847,849	-		IAI47_08735	0.48	-0.5
1,847,968	-		IAI47_08735	0.60	-0.5
1,848,021	+		IAI47_08735	0.65	-0.6
1,848,021	+		IAI47_08735	0.65	-1.7
1,848,051	-		IAI47_08735	0.68	+0.4
1,848,052	+		IAI47_08735	0.68	+0.1
1,848,052	+		IAI47_08735	0.68	+0.0
1,848,052	+		IAI47_08735	0.68	+0.0
1,848,053	-		IAI47_08735	0.68	-1.0
1,848,122	+		IAI47_08735	0.75	-0.5
1,848,123	-		IAI47_08735	0.75	+1.3
1,848,123	-		IAI47_08735	0.75	-1.7
1,848,123	-		IAI47_08735	0.75	-0.2
1,848,154	+		IAI47_08735	0.78	-0.6
1,848,154	+		IAI47_08735	0.78	+1.3
1,848,154	+		IAI47_08735	0.78	+0.5
1,848,154	+		IAI47_08735	0.78	+0.1
1,848,155	-		IAI47_08735	0.78	+0.3
1,848,155	-		IAI47_08735	0.78	-0.6
1,848,230	+		IAI47_08735	0.85	+1.2
1,848,230	+		IAI47_08735	0.85	-1.6
1,848,231	-		IAI47_08735	0.86	+1.7
1,848,231	-		IAI47_08735	0.86	+0.9
1,848,231	-		IAI47_08735	0.86	+2.7
1,848,231	-		IAI47_08735	0.86	+0.8
1,848,330	+				+0.1
1,848,330	+				+0.2
1,848,330	+				-0.3
1,848,331	-				+0.8
1,848,353	-				-2.0
1,848,374	+				-1.5
1,848,375	-				-0.9
1,848,388	+				-2.1
1,848,389	-				-1.5
1,848,393	-				-0.3
1,848,445	+				-1.0
1,848,448	+				-0.5
1,848,476	+				+1.1
1,848,492	-				+1.7
1,848,500	-				+0.9
1,848,553	+				+0.6
1,848,578	+				-1.0
1,848,579	-				+0.4
1,848,604	+				+0.7
1,848,604	+				-1.2
1,848,638	-				-1.1
1,848,650	+				-0.2
1,848,650	+				-0.1
1,848,651	-				+4.0
1,848,710	+				+2.3
1,848,710	+				+0.8
1,848,711	-				+0.5
1,848,711	-				-1.0
1,848,728	+				-0.2
1,848,729	-				-0.3
1,848,729	-				-0.0
1,848,766	+				-0.5
1,848,767	-				-0.3
1,848,767	-				-0.1
1,848,767	-				-0.0
1,848,808	+				+0.0
1,848,809	-				+1.0
1,848,814	+				+2.0
1,848,815	-		IAI47_08740	0.10	-2.0
1,848,819	+		IAI47_08740	0.13	-0.0
1,848,819	+		IAI47_08740	0.13	+0.6
1,848,820	-		IAI47_08740	0.14	-1.2
1,848,820	-		IAI47_08740	0.14	+2.2
1,848,826	+		IAI47_08740	0.18	+1.8
1,848,827	-		IAI47_08740	0.19	+0.7
1,848,850	+		IAI47_08740	0.36	+0.3
1,848,862	+		IAI47_08740	0.45	+1.2
1,848,862	+		IAI47_08740	0.45	+3.8
1,848,862	+		IAI47_08740	0.45	+1.2
1,848,862	+		IAI47_08740	0.45	+1.1
1,848,862	+		IAI47_08740	0.45	+0.3
1,848,862	+		IAI47_08740	0.45	-0.9
1,848,862	+		IAI47_08740	0.45	+1.2
1,848,880	+		IAI47_08740	0.58	+0.5
1,848,895	-		IAI47_08740	0.69	-1.1
1,848,914	-		IAI47_08740	0.83	-1.1
1,848,934	+				-1.5
1,848,934	+				-2.8
1,848,934	+				+1.7
1,848,934	+				-0.1
1,848,935	-				-0.7
1,848,938	+				-1.0
1,848,938	+				-0.2
1,848,938	+				-2.2
1,848,939	-				+0.7
1,848,954	-				-0.6
1,848,973	+				-0.8
1,848,973	+				+1.2
1,848,994	+				+0.4
1,848,994	+				+0.7
1,848,994	+				+0.2
1,848,994	+				+0.3
1,848,994	+				-2.0
1,849,002	+				+0.4
1,849,002	+				+1.5
1,849,002	+				+0.8
1,849,002	+				+1.6
1,849,003	-				+0.7
1,849,029	+				+0.4
1,849,029	+				+0.1
1,849,029	+				+0.7
1,849,059	+		IAI47_08745	0.20	-1.6
1,849,075	-		IAI47_08745	0.27	-0.9
1,849,109	+		IAI47_08745	0.43	-1.3
1,849,109	+		IAI47_08745	0.43	-0.2
1,849,209	+				-0.8
1,849,214	+				-0.8
1,849,214	+				-2.0
1,849,214	+				-0.1
1,849,214	+				+2.2
1,849,215	-				+2.4
1,849,221	+				+1.2
1,849,221	+				+0.7
1,849,221	+				+1.1
1,849,221	+				+3.5
1,849,221	+				+1.0
1,849,222	-				+0.8
1,849,222	-				+1.8
1,849,301	+				-2.4
1,849,301	+				+2.8
1,849,301	+				+1.0
1,849,316	+				+2.3
1,849,317	-				-1.5
1,849,324	-				+1.3
1,849,324	-				-2.1
1,849,329	+				+0.0
1,849,329	+				-0.5
1,849,330	-				+0.1
1,849,330	-				+2.9
1,849,330	-				+1.8
1,849,330	-				+3.1
1,849,330	-				+1.7
1,849,330	-				-1.6
1,849,345	-				+0.5
1,849,364	+				-0.8
1,849,364	+				+0.7
1,849,364	+				-1.6
1,849,364	+				+0.6
1,849,364	+				-0.1
1,849,364	+				-2.6
1,849,364	+				+0.8
1,849,364	+				-2.7
1,849,364	+				+1.7
1,849,364	+				+0.7
1,849,364	+				-2.0
1,849,364	+				+1.6
1,849,364	+				-0.3
1,849,365	-				-1.0
1,849,365	-				+2.0
1,849,365	-				+0.4
1,849,365	-				-0.5
1,849,365	-				+1.9
1,849,365	-				+0.5
1,849,365	-				+0.1
1,849,365	-				-0.8
1,849,365	-				-0.6