Strain Fitness in Pantoea sp. MT58 around IAI47_07655

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,619,653	+		IAI47_07645	0.50	+1.7
1,619,653	+		IAI47_07645	0.50	+0.4
1,619,654	-		IAI47_07645	0.50	-1.5
1,619,654	-		IAI47_07645	0.50	-0.5
1,619,654	-		IAI47_07645	0.50	+1.8
1,619,720	+		IAI47_07645	0.63	-0.4
1,619,726	+		IAI47_07645	0.64	+3.2
1,619,726	+		IAI47_07645	0.64	+1.2
1,619,726	+		IAI47_07645	0.64	+1.7
1,619,726	+		IAI47_07645	0.64	-0.4
1,619,726	+		IAI47_07645	0.64	-0.5
1,619,726	+		IAI47_07645	0.64	-1.9
1,619,726	+		IAI47_07645	0.64	+0.8
1,619,726	+		IAI47_07645	0.64	+0.7
1,619,726	+		IAI47_07645	0.64	+1.3
1,619,727	-		IAI47_07645	0.64	-1.3
1,619,727	-		IAI47_07645	0.64	+1.2
1,619,727	-		IAI47_07645	0.64	-0.8
1,619,727	-		IAI47_07645	0.64	-2.4
1,619,741	-		IAI47_07645	0.67	-2.1
1,619,762	+		IAI47_07645	0.71	+1.7
1,619,763	-		IAI47_07645	0.71	-1.2
1,619,763	-		IAI47_07645	0.71	+0.2
1,619,809	+		IAI47_07645	0.80	+1.8
1,619,810	-		IAI47_07645	0.81	+0.8
1,619,810	-		IAI47_07645	0.81	+0.8
1,619,810	-		IAI47_07645	0.81	+0.1
1,619,813	+		IAI47_07645	0.81	+0.8
1,619,813	+		IAI47_07645	0.81	-1.5
1,619,813	+		IAI47_07645	0.81	-0.7
1,619,813	+		IAI47_07645	0.81	-1.3
1,619,813	+		IAI47_07645	0.81	+0.8
1,619,814	-		IAI47_07645	0.81	-1.1
1,619,814	-		IAI47_07645	0.81	-0.2
1,619,814	-		IAI47_07645	0.81	-1.4
1,619,814	-		IAI47_07645	0.81	-0.9
1,619,822	+		IAI47_07645	0.83	-1.2
1,619,822	+		IAI47_07645	0.83	-1.8
1,619,822	+		IAI47_07645	0.83	+0.4
1,619,822	+		IAI47_07645	0.83	-1.0
1,619,823	-		IAI47_07645	0.83	+0.7
1,619,823	-		IAI47_07645	0.83	-2.5
1,619,824	+		IAI47_07645	0.83	-0.9
1,619,824	+		IAI47_07645	0.83	+0.2
1,619,825	-		IAI47_07645	0.84	+0.6
1,619,833	+		IAI47_07645	0.85	-1.3
1,619,833	+		IAI47_07645	0.85	+1.0
1,619,833	+		IAI47_07645	0.85	+1.1
1,619,865	+				-0.2
1,619,904	+				-0.0
1,619,904	+				+2.1
1,619,906	+				-1.9
1,619,906	+				+0.0
1,619,906	+				-2.5
1,619,906	+				+0.2
1,619,906	+				-1.6
1,619,907	-				+1.1
1,619,907	-				-1.1
1,619,907	-				+0.9
1,620,006	-				+3.7
1,620,011	+				-2.0
1,620,011	+				+1.0
1,620,011	+				-2.3
1,620,012	-				-1.7
1,620,012	-				+0.0
1,620,012	-				-0.6
1,620,014	-				+1.6
1,620,014	-				+1.6
1,620,022	-				-0.1
1,620,022	-				-0.7
1,620,022	-				+0.8
1,620,046	+				-0.9
1,620,046	+				-1.2
1,620,100	+				+0.7
1,620,101	-				+0.3
1,620,148	-				+0.8
1,620,148	-				+0.0
1,620,172	-				-2.7
1,620,172	-				+1.5
1,620,172	-				+0.1
1,620,172	-				-0.9
1,620,172	-				+0.3
1,620,202	+				-0.2
1,620,202	+				+1.2
1,620,202	+				-1.8
1,620,202	+				+1.1
1,620,203	-				+0.3
1,620,217	+		IAI47_07650	0.13	+0.9
1,620,218	-		IAI47_07650	0.13	+1.6
1,620,218	-		IAI47_07650	0.13	+0.6
1,620,253	+		IAI47_07650	0.21	-2.6
1,620,253	+		IAI47_07650	0.21	-1.8
1,620,254	-		IAI47_07650	0.21	-0.8
1,620,254	-		IAI47_07650	0.21	-1.1
1,620,344	+		IAI47_07650	0.41	+0.2
1,620,344	+		IAI47_07650	0.41	+0.4
1,620,363	+		IAI47_07650	0.45	-2.7
1,620,363	+		IAI47_07650	0.45	+2.4
1,620,363	+		IAI47_07650	0.45	+0.5
1,620,389	+		IAI47_07650	0.51	+0.5
1,620,390	-		IAI47_07650	0.51	+0.9
1,620,390	-		IAI47_07650	0.51	-0.1
1,620,390	-		IAI47_07650	0.51	+1.0
1,620,390	-		IAI47_07650	0.51	+0.0
1,620,390	-		IAI47_07650	0.51	-0.2
1,620,390	-		IAI47_07650	0.51	-2.0
1,620,501	+		IAI47_07650	0.76	-0.3
1,620,542	+		IAI47_07650	0.85	-0.5
1,620,543	-		IAI47_07650	0.85	-1.5
1,620,605	+				-2.0
1,620,605	+				-0.9
1,620,606	-				-1.5
1,620,606	-				+1.5
1,620,606	-				+0.4
1,620,606	-				-1.0
1,620,649	+				+1.4
1,620,649	+				-1.1
1,620,706	+				-0.8
1,620,706	+				-1.3
1,620,815	-				-2.0
1,620,934	+		IAI47_07655	0.15	+1.2
1,620,935	-		IAI47_07655	0.15	-1.4
1,620,935	-		IAI47_07655	0.15	+0.4
1,620,987	+		IAI47_07655	0.18	-1.1
1,621,096	+		IAI47_07655	0.23	+2.6
1,621,097	-		IAI47_07655	0.23	+0.3
1,621,121	+		IAI47_07655	0.24	+1.2
1,621,122	-		IAI47_07655	0.24	+2.1
1,621,122	-		IAI47_07655	0.24	+0.8
1,621,135	+		IAI47_07655	0.25	-0.5
1,621,136	-		IAI47_07655	0.25	-0.9
1,621,136	-		IAI47_07655	0.25	+0.6
1,621,149	+		IAI47_07655	0.26	-0.2
1,621,149	+		IAI47_07655	0.26	-1.4
1,621,149	+		IAI47_07655	0.26	+0.9
1,621,149	+		IAI47_07655	0.26	-0.6
1,621,150	-		IAI47_07655	0.26	-1.3
1,621,216	+		IAI47_07655	0.29	+1.4
1,621,216	+		IAI47_07655	0.29	-0.4
1,621,217	-		IAI47_07655	0.29	-1.7
1,621,217	-		IAI47_07655	0.29	+0.3
1,621,226	+		IAI47_07655	0.29	-1.7
1,621,227	-		IAI47_07655	0.29	+1.2
1,621,227	-		IAI47_07655	0.29	-0.9
1,621,259	+		IAI47_07655	0.31	+0.1
1,621,259	+		IAI47_07655	0.31	+0.3
1,621,259	+		IAI47_07655	0.31	+2.8
1,621,259	+		IAI47_07655	0.31	+0.9
1,621,260	-		IAI47_07655	0.31	+0.3
1,621,260	-		IAI47_07655	0.31	-2.1
1,621,283	+		IAI47_07655	0.32	+0.1
1,621,283	+		IAI47_07655	0.32	-1.2
1,621,283	+		IAI47_07655	0.32	+0.7
1,621,283	+		IAI47_07655	0.32	+0.6
1,621,339	+		IAI47_07655	0.35	-1.2
1,621,340	-		IAI47_07655	0.35	+0.3
1,621,363	-		IAI47_07655	0.36	+0.5
1,621,442	+		IAI47_07655	0.40	+1.4
1,621,442	+		IAI47_07655	0.40	-1.1
1,621,442	+		IAI47_07655	0.40	-0.1
1,621,442	+		IAI47_07655	0.40	-1.7
1,621,442	+		IAI47_07655	0.40	+0.4
1,621,442	+		IAI47_07655	0.40	-0.2
1,621,442	+		IAI47_07655	0.40	+0.4
1,621,443	-		IAI47_07655	0.40	+1.9
1,621,487	-		IAI47_07655	0.42	+0.3
1,621,577	-		IAI47_07655	0.46	+0.4
1,621,647	+		IAI47_07655	0.50	-2.2
1,621,648	-		IAI47_07655	0.50	-1.2
1,621,648	-		IAI47_07655	0.50	-1.4
1,621,648	-		IAI47_07655	0.50	+1.3
1,621,775	+		IAI47_07655	0.56	+1.1
1,621,776	-		IAI47_07655	0.56	+0.1
1,621,777	+		IAI47_07655	0.56	+1.5
1,621,778	-		IAI47_07655	0.56	+1.2
1,621,778	-		IAI47_07655	0.56	-1.9
1,621,778	-		IAI47_07655	0.56	+0.6
1,621,843	+		IAI47_07655	0.59	+0.0
1,621,843	+		IAI47_07655	0.59	-0.5
1,621,843	+		IAI47_07655	0.59	+0.6
1,621,843	+		IAI47_07655	0.59	+1.1
1,621,844	-		IAI47_07655	0.60	-3.1
1,621,844	-		IAI47_07655	0.60	-1.9
1,621,874	-		IAI47_07655	0.61	-1.2
1,621,898	+		IAI47_07655	0.62	-1.1
1,621,898	+		IAI47_07655	0.62	-1.6
1,621,898	+		IAI47_07655	0.62	-0.4
1,621,898	+		IAI47_07655	0.62	-1.2
1,621,898	+		IAI47_07655	0.62	+1.5
1,621,899	-		IAI47_07655	0.62	-1.5
1,621,899	-		IAI47_07655	0.62	-1.8
1,621,899	-		IAI47_07655	0.62	-0.4
1,621,899	-		IAI47_07655	0.62	+0.6
1,621,899	-		IAI47_07655	0.62	+0.5
1,622,038	+		IAI47_07655	0.69	-0.2
1,622,039	-		IAI47_07655	0.69	+0.3
1,622,061	+		IAI47_07655	0.70	-0.1
1,622,095	+		IAI47_07655	0.72	-1.1
1,622,142	+		IAI47_07655	0.74	+1.9
1,622,142	+		IAI47_07655	0.74	+0.1
1,622,142	+		IAI47_07655	0.74	+1.8
1,622,216	+		IAI47_07655	0.78	+0.1
1,622,217	-		IAI47_07655	0.78	+1.6
1,622,217	-		IAI47_07655	0.78	+0.9
1,622,218	+		IAI47_07655	0.78	+0.1
1,622,219	-		IAI47_07655	0.78	+0.2
1,622,219	-		IAI47_07655	0.78	-0.5
1,622,246	+		IAI47_07655	0.79	+0.8
1,622,247	-		IAI47_07655	0.79	+1.2
1,622,392	+		IAI47_07655	0.86	+0.1
1,622,538	+				-0.8
1,622,538	+				-1.2
1,622,539	-				-1.6
1,622,539	-				+0.3
1,622,539	-				-2.7
1,622,539	-				-1.0
1,622,539	-				-2.7
1,622,560	-				-0.3
1,622,560	-				+1.0
1,622,560	-				-0.9
1,622,641	+				-3.6
1,622,669	+				-0.3
1,622,669	+				+0.9
1,622,669	+				+3.5
1,622,669	+				+0.7
1,622,669	+				+0.5
1,622,669	+				-0.0
1,622,669	+				-1.9
1,622,669	+				-1.7
1,622,670	-				+0.7
1,622,670	-				+1.4
1,622,670	-				-2.3
1,622,670	-				-1.6
1,622,670	-				-0.5
1,622,670	-				-0.5
1,622,670	-				+0.1
1,622,670	-				+0.7
1,622,670	-				+1.1
1,622,690	+				+1.9
1,622,690	+				-0.3
1,622,690	+				-1.2
1,622,690	+				-0.4
1,622,691	-				-0.6
1,622,691	-				-0.6
1,622,691	-				-0.1
1,622,695	+				+4.1
1,622,695	+				+0.0
1,622,695	+				-0.3
1,622,695	+				+0.4
1,622,695	+				+0.0
1,622,696	-				-0.8
1,622,712	+				-0.6
1,622,712	+				-0.1
1,622,713	-				-0.3
1,622,713	-				+0.6
1,622,713	-				+1.0
1,622,744	+				+2.2
1,622,745	-				+0.2
1,622,757	-				+0.2
1,622,778	-				-0.0
1,622,862	+				-0.4
1,622,862	+				+0.4
1,622,862	+				-0.8
1,622,877	+		IAI47_07660	0.10	-0.3
1,622,877	+		IAI47_07660	0.10	-1.3
1,622,878	-		IAI47_07660	0.10	+1.6
1,622,888	-		IAI47_07660	0.11	-0.2
1,622,888	-		IAI47_07660	0.11	+1.5
1,622,908	-		IAI47_07660	0.12	-1.8
1,622,908	-		IAI47_07660	0.12	+0.5
1,622,930	+		IAI47_07660	0.13	-1.3
1,622,930	+		IAI47_07660	0.13	+1.6
1,622,930	+		IAI47_07660	0.13	-0.2
1,622,931	-		IAI47_07660	0.13	-0.7
1,622,931	-		IAI47_07660	0.13	-1.6
1,622,933	+		IAI47_07660	0.13	+1.2
1,622,934	-		IAI47_07660	0.13	+1.6
1,622,934	-		IAI47_07660	0.13	-0.9
1,622,934	-		IAI47_07660	0.13	+0.6
1,622,934	-		IAI47_07660	0.13	-1.3
1,622,934	-		IAI47_07660	0.13	-1.4
1,623,000	+		IAI47_07660	0.17	+1.2
1,623,000	+		IAI47_07660	0.17	+5.1
1,623,041	+		IAI47_07660	0.19	+0.2
1,623,041	+		IAI47_07660	0.19	+0.0
1,623,041	+		IAI47_07660	0.19	+0.9
1,623,042	-		IAI47_07660	0.19	+0.6
1,623,239	+		IAI47_07660	0.29	-1.0
1,623,239	+		IAI47_07660	0.29	+0.7
1,623,240	-		IAI47_07660	0.29	+4.9
1,623,240	-		IAI47_07660	0.29	-1.0
1,623,254	+		IAI47_07660	0.30	-2.1
1,623,254	+		IAI47_07660	0.30	-1.1
1,623,255	-		IAI47_07660	0.30	+1.4
1,623,255	-		IAI47_07660	0.30	-0.4
1,623,269	+		IAI47_07660	0.30	-0.3
1,623,269	+		IAI47_07660	0.30	-1.2
1,623,269	+		IAI47_07660	0.30	+1.0
1,623,270	-		IAI47_07660	0.30	+0.1
1,623,270	-		IAI47_07660	0.30	-0.3
1,623,298	+		IAI47_07660	0.32	+0.7
1,623,307	+		IAI47_07660	0.32	+0.5
1,623,307	+		IAI47_07660	0.32	-1.0
1,623,307	+		IAI47_07660	0.32	+1.7
1,623,308	-		IAI47_07660	0.32	+1.9
1,623,308	-		IAI47_07660	0.32	-1.8
1,623,308	-		IAI47_07660	0.32	+1.6
1,623,308	-		IAI47_07660	0.32	-0.7
1,623,308	-		IAI47_07660	0.32	+2.3
1,623,324	+		IAI47_07660	0.33	+2.2
1,623,350	+		IAI47_07660	0.35	-3.0
1,623,351	-		IAI47_07660	0.35	-1.3
1,623,351	-		IAI47_07660	0.35	+0.5
1,623,375	+		IAI47_07660	0.36	-1.3
1,623,390	+		IAI47_07660	0.37	-0.6
1,623,391	-		IAI47_07660	0.37	+0.5
1,623,391	-		IAI47_07660	0.37	-1.3
1,623,428	+		IAI47_07660	0.39	-0.0
1,623,437	+		IAI47_07660	0.39	+2.0
1,623,438	-		IAI47_07660	0.39	+0.8
1,623,474	+		IAI47_07660	0.41	-1.1
1,623,474	+		IAI47_07660	0.41	-0.2
1,623,564	+		IAI47_07660	0.45	-0.5
1,623,564	+		IAI47_07660	0.45	-0.4
1,623,564	+		IAI47_07660	0.45	-1.7
1,623,564	+		IAI47_07660	0.45	+1.2
1,623,564	+		IAI47_07660	0.45	-0.6
1,623,564	+		IAI47_07660	0.45	+0.2
1,623,564	+		IAI47_07660	0.45	+0.9
1,623,564	+		IAI47_07660	0.45	+2.3
1,623,564	+		IAI47_07660	0.45	-1.3
1,623,564	+		IAI47_07660	0.45	+0.1
1,623,564	+		IAI47_07660	0.45	-1.6
1,623,565	-		IAI47_07660	0.46	+0.3
1,623,565	-		IAI47_07660	0.46	+0.4
1,623,565	-		IAI47_07660	0.46	-0.6
1,623,565	-		IAI47_07660	0.46	-0.3
1,623,565	-		IAI47_07660	0.46	-1.1
1,623,565	-		IAI47_07660	0.46	-2.0
1,623,565	-		IAI47_07660	0.46	-1.0
1,623,565	-		IAI47_07660	0.46	+1.1
1,623,645	-		IAI47_07660	0.50	-0.6