Strain Fitness in Pantoea sp. MT58 around IAI47_07535

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,590,250	-		IAI47_07530	0.66	-0.4
1,590,547	-		IAI47_07530	0.76	+3.4
1,590,660	+		IAI47_07530	0.80	+1.4
1,590,692	-		IAI47_07530	0.81	-0.0
1,590,903	+		IAI47_07530	0.89	-1.2
1,590,953	+				-1.4
1,590,973	-				-1.1
1,590,998	-				-0.7
1,591,017	-				+0.1
1,591,038	+				+2.0
1,591,091	-				-0.2
1,591,123	-				-1.2
1,591,148	-				-0.9
1,591,228	-				-0.5
1,591,278	-				-0.2
1,591,413	-				+1.2
1,591,465	+		IAI47_07535	0.12	+3.1
1,591,473	-		IAI47_07535	0.12	-0.9
1,591,509	-		IAI47_07535	0.14	+0.6
1,591,516	+		IAI47_07535	0.14	-1.6
1,591,517	-		IAI47_07535	0.14	-0.0
1,591,517	-		IAI47_07535	0.14	+0.5
1,591,518	+		IAI47_07535	0.15	+1.5
1,591,519	-		IAI47_07535	0.15	-1.4
1,591,519	-		IAI47_07535	0.15	+2.8
1,591,519	-		IAI47_07535	0.15	-2.8
1,591,546	+		IAI47_07535	0.16	-0.4
1,591,584	-		IAI47_07535	0.18	-2.2
1,591,584	-		IAI47_07535	0.18	+0.8
1,591,599	-		IAI47_07535	0.19	+1.6
1,591,599	-		IAI47_07535	0.19	+1.1
1,591,599	-		IAI47_07535	0.19	+1.5
1,591,645	-		IAI47_07535	0.21	+0.8
1,591,823	+		IAI47_07535	0.30	-0.5
1,592,179	+		IAI47_07535	0.49	+2.3
1,592,186	-		IAI47_07535	0.49	-0.8
1,592,227	+		IAI47_07535	0.51	+0.4
1,592,227	+		IAI47_07535	0.51	-0.6
1,592,228	-		IAI47_07535	0.51	+1.8
1,592,245	-		IAI47_07535	0.52	-0.4
1,592,249	-		IAI47_07535	0.52	+2.9
1,592,355	+		IAI47_07535	0.58	+1.6
1,592,356	-		IAI47_07535	0.58	-0.4
1,592,567	+		IAI47_07535	0.69	+0.8
1,592,623	+		IAI47_07535	0.71	+1.3
1,592,693	+		IAI47_07535	0.75	-0.0
1,592,693	+		IAI47_07535	0.75	-2.4
1,592,747	+		IAI47_07535	0.78	-1.1
1,592,747	+		IAI47_07535	0.78	-0.4
1,592,766	-		IAI47_07535	0.79	+2.0
1,592,766	-		IAI47_07535	0.79	+1.7
1,592,783	+		IAI47_07535	0.80	-1.3
1,592,784	-		IAI47_07535	0.80	-0.0
1,592,789	+		IAI47_07535	0.80	+0.3
1,592,789	+		IAI47_07535	0.80	+0.3
1,592,789	+		IAI47_07535	0.80	+0.4
1,592,790	-		IAI47_07535	0.80	-1.7
1,592,794	+		IAI47_07535	0.80	+0.3
1,592,795	-		IAI47_07535	0.80	-2.1
1,592,795	-		IAI47_07535	0.80	+3.0
1,592,809	+		IAI47_07535	0.81	+1.2
1,592,809	+		IAI47_07535	0.81	-0.7
1,592,809	+		IAI47_07535	0.81	-0.4
1,592,810	-		IAI47_07535	0.81	-1.3
1,592,810	-		IAI47_07535	0.81	-2.1
1,592,810	-		IAI47_07535	0.81	-0.7
1,592,833	+		IAI47_07535	0.82	-3.1
1,592,834	-		IAI47_07535	0.82	+1.3
1,592,834	-		IAI47_07535	0.82	-0.2
1,592,846	+		IAI47_07535	0.83	+2.5
1,592,846	+		IAI47_07535	0.83	+1.6
1,592,847	-		IAI47_07535	0.83	-1.3
1,592,847	-		IAI47_07535	0.83	+1.0
1,592,856	+		IAI47_07535	0.83	+0.5
1,592,868	-		IAI47_07535	0.84	+0.5
1,592,927	+		IAI47_07535	0.87	-1.2
1,592,927	+		IAI47_07535	0.87	+0.8
1,592,927	+		IAI47_07535	0.87	+0.5
1,592,928	-		IAI47_07535	0.87	-0.2
1,592,955	+		IAI47_07535	0.89	+0.9
1,592,960	+		IAI47_07535	0.89	-1.7
1,592,977	+		IAI47_07535	0.90	-0.5
1,593,005	-				+2.2
1,593,005	-				+1.1
1,593,081	-				-0.5
1,593,102	-				+1.4
1,593,125	+				-0.2
1,593,132	-				-0.5
1,593,132	-				-0.4
1,593,132	-				+1.8
1,593,194	-				+0.3
1,593,234	-		IAI47_07540	0.16	-0.2
1,593,234	-		IAI47_07540	0.16	-1.5
1,593,234	-		IAI47_07540	0.16	+1.9
1,593,239	+		IAI47_07540	0.18	+1.0
1,593,239	+		IAI47_07540	0.18	+0.0
1,593,239	+		IAI47_07540	0.18	-2.1
1,593,239	+		IAI47_07540	0.18	+0.5
1,593,239	+		IAI47_07540	0.18	+1.3
1,593,240	-		IAI47_07540	0.18	+0.2
1,593,240	-		IAI47_07540	0.18	+1.0
1,593,240	-		IAI47_07540	0.18	-0.2
1,593,240	-		IAI47_07540	0.18	-1.3
1,593,246	-		IAI47_07540	0.20	+0.2
1,593,246	-		IAI47_07540	0.20	-0.7
1,593,246	-		IAI47_07540	0.20	-0.7
1,593,246	-		IAI47_07540	0.20	-0.9
1,593,246	-		IAI47_07540	0.20	-0.9
1,593,248	+		IAI47_07540	0.21	-0.0
1,593,249	-		IAI47_07540	0.21	-0.2
1,593,249	-		IAI47_07540	0.21	+2.0
1,593,249	-		IAI47_07540	0.21	+1.4
1,593,249	-		IAI47_07540	0.21	+0.9
1,593,249	-		IAI47_07540	0.21	+2.1
1,593,249	-		IAI47_07540	0.21	+0.4
1,593,295	-		IAI47_07540	0.38	-2.6
1,593,295	-		IAI47_07540	0.38	+0.1
1,593,295	-		IAI47_07540	0.38	+3.6
1,593,310	+		IAI47_07540	0.43	-0.0
1,593,311	-		IAI47_07540	0.43	+1.1
1,593,311	-		IAI47_07540	0.43	-0.4
1,593,315	-		IAI47_07540	0.45	-0.2
1,593,315	-		IAI47_07540	0.45	-0.8
1,593,315	-		IAI47_07540	0.45	+1.1
1,593,315	-		IAI47_07540	0.45	+1.4
1,593,315	-		IAI47_07540	0.45	+0.4
1,593,321	-		IAI47_07540	0.47	+2.4
1,593,321	-		IAI47_07540	0.47	+0.4
1,593,321	-		IAI47_07540	0.47	-0.9
1,593,321	-		IAI47_07540	0.47	-0.0
1,593,321	-		IAI47_07540	0.47	-1.8
1,593,321	-		IAI47_07540	0.47	-0.2
1,593,321	-		IAI47_07540	0.47	+0.8
1,593,361	+		IAI47_07540	0.61	-0.2
1,593,361	+		IAI47_07540	0.61	-0.5
1,593,361	+		IAI47_07540	0.61	-0.4
1,593,361	+		IAI47_07540	0.61	-0.9
1,593,362	-		IAI47_07540	0.61	-1.0
1,593,362	-		IAI47_07540	0.61	-0.5
1,593,362	-		IAI47_07540	0.61	-0.0
1,593,362	-		IAI47_07540	0.61	-1.8
1,593,363	+		IAI47_07540	0.61	-1.3
1,593,364	-		IAI47_07540	0.62	+1.1
1,593,364	-		IAI47_07540	0.62	+1.2
1,593,364	-		IAI47_07540	0.62	+0.6
1,593,364	-		IAI47_07540	0.62	-0.8
1,593,374	-		IAI47_07540	0.65	-2.2
1,593,383	+		IAI47_07540	0.68	+3.1
1,593,383	+		IAI47_07540	0.68	+0.0
1,593,384	-		IAI47_07540	0.69	-0.9
1,593,384	-		IAI47_07540	0.69	-1.0
1,593,384	-		IAI47_07540	0.69	+0.3
1,593,384	-		IAI47_07540	0.69	+0.2
1,593,384	-		IAI47_07540	0.69	+0.9
1,593,384	-		IAI47_07540	0.69	+0.2
1,593,384	-		IAI47_07540	0.69	-3.4
1,593,384	-		IAI47_07540	0.69	-0.0
1,593,384	-		IAI47_07540	0.69	+1.1
1,593,384	-		IAI47_07540	0.69	+1.3
1,593,394	+		IAI47_07540	0.72	-1.4
1,593,394	+		IAI47_07540	0.72	-3.1
1,593,395	-		IAI47_07540	0.73	-0.2
1,593,395	-		IAI47_07540	0.73	+2.1
1,593,395	-		IAI47_07540	0.73	+1.1
1,593,401	+		IAI47_07540	0.75	-1.9
1,593,402	-		IAI47_07540	0.75	+0.8
1,593,402	-		IAI47_07540	0.75	-0.5
1,593,436	+		IAI47_07540	0.87	+0.7
1,593,436	+		IAI47_07540	0.87	+0.3
1,593,437	-		IAI47_07540	0.87	-0.2
1,593,457	+				-0.1
1,593,457	+				-0.7
1,593,458	-				-1.1
1,593,458	-				-0.8
1,593,467	+				+1.8
1,593,467	+				-0.4
1,593,467	+				-1.3
1,593,468	-				+1.2
1,593,468	-				-1.9
1,593,468	-				+1.0
1,593,468	-				+1.6
1,593,476	+				-0.5
1,593,490	+				-0.5
1,593,490	+				-0.1
1,593,490	+				-0.0
1,593,494	-				-0.4
1,593,527	+				-0.1
1,593,528	-				+1.6
1,593,530	+				-0.5
1,593,530	+				-1.2
1,593,530	+				+1.2
1,593,530	+				-0.6
1,593,531	-				-0.9
1,593,531	-				-1.2
1,593,544	-				+1.1
1,593,572	+				+0.1
1,593,573	-				-0.5
1,593,602	-				+0.3
1,593,602	-				-0.4
1,593,602	-				+0.3
1,593,613	+				-0.8
1,593,613	+				+1.3
1,593,624	+				-0.3
1,593,683	+				+0.8
1,593,683	+				+2.4
1,593,683	+				-0.8
1,593,684	-				-2.0
1,593,695	+				+0.3
1,593,696	-				+2.2
1,593,758	+				+0.3
1,593,759	-				-0.0
1,593,759	-				+0.1
1,593,759	-				+1.7
1,593,767	-				+2.4
1,593,831	+		IAI47_07545	0.14	-1.4
1,593,831	+		IAI47_07545	0.14	+1.9
1,593,832	-		IAI47_07545	0.14	-1.5
1,593,832	-		IAI47_07545	0.14	-1.2
1,593,846	+		IAI47_07545	0.15	+1.5
1,593,846	+		IAI47_07545	0.15	-0.1
1,593,846	+		IAI47_07545	0.15	+0.8
1,593,846	+		IAI47_07545	0.15	+0.7
1,593,847	-		IAI47_07545	0.15	-0.4
1,593,847	-		IAI47_07545	0.15	+0.8
1,593,847	-		IAI47_07545	0.15	+0.7
1,593,847	-		IAI47_07545	0.15	-0.5
1,593,854	+		IAI47_07545	0.16	+0.7
1,593,854	+		IAI47_07545	0.16	+1.3
1,593,855	-		IAI47_07545	0.16	+0.3
1,593,855	-		IAI47_07545	0.16	+0.7
1,593,855	-		IAI47_07545	0.16	-0.5
1,593,904	+		IAI47_07545	0.20	-1.0
1,593,905	-		IAI47_07545	0.20	-1.2
1,593,906	-		IAI47_07545	0.20	+0.6
1,593,953	+		IAI47_07545	0.24	+0.8
1,593,965	-		IAI47_07545	0.25	-1.0
1,593,965	-		IAI47_07545	0.25	+1.2
1,593,975	-		IAI47_07545	0.25	+0.2
1,593,981	+		IAI47_07545	0.26	-0.1
1,593,981	+		IAI47_07545	0.26	-1.5
1,593,982	-		IAI47_07545	0.26	+0.4
1,593,982	-		IAI47_07545	0.26	+3.4
1,594,006	+		IAI47_07545	0.28	+0.8
1,594,007	-		IAI47_07545	0.28	-0.5
1,594,033	-		IAI47_07545	0.30	-0.5
1,594,049	+		IAI47_07545	0.31	+0.1
1,594,049	+		IAI47_07545	0.31	+4.1
1,594,049	+		IAI47_07545	0.31	+0.2
1,594,049	+		IAI47_07545	0.31	+0.9
1,594,049	+		IAI47_07545	0.31	+1.5
1,594,049	+		IAI47_07545	0.31	-2.4
1,594,050	-		IAI47_07545	0.31	+0.7
1,594,050	-		IAI47_07545	0.31	-1.0
1,594,050	-		IAI47_07545	0.31	+1.2
1,594,050	-		IAI47_07545	0.31	-2.2
1,594,071	-		IAI47_07545	0.33	+2.0
1,594,071	-		IAI47_07545	0.33	+0.1
1,594,143	+		IAI47_07545	0.39	+1.5
1,594,144	-		IAI47_07545	0.39	+1.4
1,594,144	-		IAI47_07545	0.39	+1.7
1,594,148	+		IAI47_07545	0.39	+1.7