Strain Fitness in Pantoea sp. MT58 around IAI47_06545

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,362,518	+		IAI47_06540	0.59	-1.5
1,362,518	+		IAI47_06540	0.59	+0.3
1,362,518	+		IAI47_06540	0.59	-0.9
1,362,519	-		IAI47_06540	0.59	+0.9
1,362,519	-		IAI47_06540	0.59	-0.4
1,362,537	+		IAI47_06540	0.61	+0.7
1,362,537	+		IAI47_06540	0.61	+0.4
1,362,538	-		IAI47_06540	0.61	-1.5
1,362,538	-		IAI47_06540	0.61	-2.3
1,362,538	-		IAI47_06540	0.61	+1.5
1,362,539	+		IAI47_06540	0.61	+1.6
1,362,539	+		IAI47_06540	0.61	-1.4
1,362,539	+		IAI47_06540	0.61	-0.0
1,362,539	+		IAI47_06540	0.61	+1.1
1,362,539	+		IAI47_06540	0.61	-1.3
1,362,539	+		IAI47_06540	0.61	+1.3
1,362,539	+		IAI47_06540	0.61	+0.2
1,362,539	+		IAI47_06540	0.61	-0.8
1,362,539	+		IAI47_06540	0.61	-2.3
1,362,539	+		IAI47_06540	0.61	-1.2
1,362,539	+		IAI47_06540	0.61	+0.8
1,362,539	+		IAI47_06540	0.61	+1.1
1,362,539	+		IAI47_06540	0.61	-0.8
1,362,539	+		IAI47_06540	0.61	+0.7
1,362,539	+		IAI47_06540	0.61	-1.9
1,362,539	+		IAI47_06540	0.61	-0.1
1,362,540	-		IAI47_06540	0.61	-1.1
1,362,540	-		IAI47_06540	0.61	-1.0
1,362,540	-		IAI47_06540	0.61	-0.8
1,362,540	-		IAI47_06540	0.61	-0.8
1,362,540	-		IAI47_06540	0.61	-1.4
1,362,540	-		IAI47_06540	0.61	-0.6
1,362,540	-		IAI47_06540	0.61	+0.3
1,362,540	-		IAI47_06540	0.61	-0.4
1,362,540	-		IAI47_06540	0.61	-0.1
1,362,540	-		IAI47_06540	0.61	-0.1
1,362,540	-		IAI47_06540	0.61	-0.7
1,362,540	-		IAI47_06540	0.61	-1.5
1,362,540	-		IAI47_06540	0.61	-0.9
1,362,540	-		IAI47_06540	0.61	+0.8
1,362,540	-		IAI47_06540	0.61	-0.7
1,362,540	-		IAI47_06540	0.61	+1.4
1,362,540	-		IAI47_06540	0.61	+2.0
1,362,540	-		IAI47_06540	0.61	+0.1
1,362,540	-		IAI47_06540	0.61	+0.0
1,362,540	-		IAI47_06540	0.61	-0.5
1,362,587	+		IAI47_06540	0.64	+0.8
1,362,588	-		IAI47_06540	0.64	+0.0
1,362,588	-		IAI47_06540	0.64	-0.4
1,362,590	+		IAI47_06540	0.64	+0.3
1,362,590	+		IAI47_06540	0.64	-0.2
1,362,593	+		IAI47_06540	0.64	+1.9
1,362,593	+		IAI47_06540	0.64	+0.7
1,362,593	+		IAI47_06540	0.64	-0.7
1,362,594	-		IAI47_06540	0.64	-3.2
1,362,594	-		IAI47_06540	0.64	-0.5
1,362,594	-		IAI47_06540	0.64	-0.3
1,362,594	-		IAI47_06540	0.64	-0.9
1,362,621	-		IAI47_06540	0.66	+0.4
1,362,661	-		IAI47_06540	0.68	+0.8
1,362,661	-		IAI47_06540	0.68	-1.5
1,362,667	+		IAI47_06540	0.68	-0.3
1,362,668	-		IAI47_06540	0.68	+0.3
1,362,668	-		IAI47_06540	0.68	+0.9
1,362,668	-		IAI47_06540	0.68	+0.4
1,362,743	-		IAI47_06540	0.73	+0.5
1,362,743	-		IAI47_06540	0.73	-1.3
1,362,747	+		IAI47_06540	0.73	+1.3
1,362,748	-		IAI47_06540	0.73	+1.4
1,362,769	+		IAI47_06540	0.74	+0.7
1,362,770	-		IAI47_06540	0.75	-0.7
1,362,770	-		IAI47_06540	0.75	-2.2
1,362,782	+		IAI47_06540	0.75	+1.5
1,362,783	-		IAI47_06540	0.75	-1.7
1,362,821	+		IAI47_06540	0.78	+0.9
1,362,822	-		IAI47_06540	0.78	-1.4
1,362,836	+		IAI47_06540	0.78	+2.4
1,362,836	+		IAI47_06540	0.78	-0.1
1,362,836	+		IAI47_06540	0.78	+0.8
1,362,836	+		IAI47_06540	0.78	-0.4
1,362,836	+		IAI47_06540	0.78	-1.0
1,362,837	-		IAI47_06540	0.79	-0.1
1,362,837	-		IAI47_06540	0.79	+0.9
1,362,837	-		IAI47_06540	0.79	+1.4
1,362,837	-		IAI47_06540	0.79	-2.0
1,362,837	-		IAI47_06540	0.79	+0.1
1,362,838	+		IAI47_06540	0.79	+0.4
1,362,838	+		IAI47_06540	0.79	+0.6
1,362,838	+		IAI47_06540	0.79	+0.6
1,362,838	+		IAI47_06540	0.79	+0.4
1,362,838	+		IAI47_06540	0.79	-0.6
1,362,838	+		IAI47_06540	0.79	-0.1
1,362,838	+		IAI47_06540	0.79	+1.4
1,362,838	+		IAI47_06540	0.79	+2.1
1,362,839	-		IAI47_06540	0.79	+0.8
1,362,839	-		IAI47_06540	0.79	+0.0
1,362,839	-		IAI47_06540	0.79	+0.1
1,362,839	-		IAI47_06540	0.79	+0.1
1,362,839	-		IAI47_06540	0.79	-0.7
1,362,839	-		IAI47_06540	0.79	-0.2
1,362,880	+		IAI47_06540	0.81	+1.9
1,362,880	+		IAI47_06540	0.81	-0.8
1,362,880	+		IAI47_06540	0.81	+0.9
1,362,880	+		IAI47_06540	0.81	+0.5
1,362,880	+		IAI47_06540	0.81	-0.9
1,362,881	-		IAI47_06540	0.81	-1.3
1,362,881	-		IAI47_06540	0.81	-1.0
1,362,881	-		IAI47_06540	0.81	+0.2
1,362,884	+		IAI47_06540	0.81	-0.2
1,362,884	+		IAI47_06540	0.81	-0.0
1,362,884	+		IAI47_06540	0.81	-0.2
1,362,884	+		IAI47_06540	0.81	-0.4
1,362,885	-		IAI47_06540	0.81	+1.3
1,362,885	-		IAI47_06540	0.81	+1.2
1,362,885	-		IAI47_06540	0.81	-0.5
1,362,939	-		IAI47_06540	0.85	-1.5
1,362,939	-		IAI47_06540	0.85	-0.5
1,362,939	-		IAI47_06540	0.85	+2.1
1,363,044	-				+0.9
1,363,044	-				-1.0
1,363,103	+				+0.3
1,363,103	+				+0.5
1,363,104	-				+0.9
1,363,155	+				-0.2
1,363,197	+				+1.4
1,363,197	+				-0.7
1,363,197	+				-0.5
1,363,197	+				-1.5
1,363,197	+				+1.1
1,363,198	-				+1.1
1,363,198	-				+2.0
1,363,215	+				-2.3
1,363,223	-				-0.4
1,363,225	-				+0.5
1,363,225	-				+0.5
1,363,238	+				+1.1
1,363,239	-				+1.9
1,363,239	-				+0.5
1,363,239	-				+1.0
1,363,241	+				-0.2
1,363,242	-				-0.3
1,363,295	+				-0.1
1,363,316	+				-1.2
1,363,317	-				-1.6
1,363,317	-				+0.6
1,363,317	-				-0.5
1,363,362	+				-0.2
1,363,362	+				+2.7
1,363,363	-				+0.5
1,363,363	-				-0.1
1,363,363	-				-0.5
1,363,363	-				+0.6
1,363,379	+				+0.4
1,363,423	+				-0.9
1,363,438	+				-1.9
1,363,439	-				-1.8
1,363,439	-				+0.9
1,363,449	+				+1.4
1,363,450	-				-1.5
1,363,462	+				-0.5
1,363,462	+				+0.1
1,363,462	+				+1.0
1,363,462	+				-1.7
1,363,462	+				-1.1
1,363,463	-				+0.7
1,363,463	-				-0.1
1,363,495	+				+1.3
1,363,495	+				+1.1
1,363,496	-				-1.0
1,363,496	-				+1.1
1,363,496	-				-0.6
1,363,496	-				+0.4
1,363,512	-				-0.3
1,363,584	-		IAI47_06545	0.19	+2.2
1,363,645	+		IAI47_06545	0.27	-1.9
1,363,647	+		IAI47_06545	0.28	+2.1
1,363,647	+		IAI47_06545	0.28	+0.5
1,363,647	+		IAI47_06545	0.28	-0.8
1,363,648	-		IAI47_06545	0.28	+0.9
1,363,648	-		IAI47_06545	0.28	+0.5
1,363,956	-		IAI47_06545	0.71	+2.7
1,363,972	-		IAI47_06545	0.73	+0.7
1,363,972	-		IAI47_06545	0.73	-0.0
1,363,988	-		IAI47_06545	0.75	-0.8
1,364,015	+		IAI47_06545	0.79	+1.7
1,364,023	+		IAI47_06545	0.80	+2.6
1,364,051	+		IAI47_06545	0.84	+0.7
1,364,052	+		IAI47_06545	0.84	-0.7
1,364,052	+		IAI47_06545	0.84	+1.1
1,364,052	+		IAI47_06545	0.84	-1.2
1,364,052	+		IAI47_06545	0.84	-1.6
1,364,053	-		IAI47_06545	0.84	-0.7
1,364,088	+		IAI47_06545	0.89	-1.0
1,364,088	+		IAI47_06545	0.89	+0.6
1,364,089	-		IAI47_06545	0.89	+1.0
1,364,120	-				+2.4
1,364,158	-				-0.5
1,364,176	+				+0.7
1,364,176	+				+0.1
1,364,176	+				+0.4
1,364,177	-				-0.2
1,364,177	-				+1.3
1,364,177	-				+0.1
1,364,193	-				-2.2
1,364,193	-				-0.9
1,364,339	-		IAI47_06550	0.52	-1.2
1,364,360	+		IAI47_06550	0.62	-0.9
1,364,360	+		IAI47_06550	0.62	+1.1
1,364,360	+		IAI47_06550	0.62	-1.4
1,364,360	+		IAI47_06550	0.62	+1.1
1,364,361	-		IAI47_06550	0.63	-1.5
1,364,380	-		IAI47_06550	0.72	-0.5
1,364,380	-		IAI47_06550	0.72	+0.4
1,364,395	+		IAI47_06550	0.79	+0.8
1,364,396	-		IAI47_06550	0.80	-0.1
1,364,466	+				+0.1
1,364,467	-				+0.3
1,364,472	-				+0.1
1,364,472	-				-0.1
1,364,472	-				+0.9
1,364,472	-				+0.8
1,364,619	+				-2.7
1,364,641	+				-0.3
1,364,641	+				+1.1
1,364,641	+				-1.3
1,364,642	-				-1.0
1,364,684	-				-1.8
1,364,755	-				+0.1
1,364,792	+				+0.2
1,364,792	+				-2.4
1,364,792	+				+2.1
1,364,792	+				-0.6
1,364,792	+				-1.0
1,364,792	+				+1.5
1,364,793	-				-1.9
1,364,793	-				-1.4
1,364,796	+				-0.9
1,364,797	-				+0.4
1,364,797	-				-2.6
1,364,797	-				+0.3
1,364,797	-				-0.3
1,364,797	-				+1.1
1,364,797	-				-1.9
1,364,798	+				-1.1
1,364,798	+				+1.0
1,364,799	-				-1.9
1,364,829	+				+3.2
1,364,830	-				-0.5
1,364,976	+				-1.5
1,364,976	+				-0.7
1,364,976	+				+0.8
1,364,977	-				-0.9
1,364,977	-				+1.4
1,364,981	+				-2.0
1,364,981	+				-1.3
1,364,981	+				-0.6
1,364,982	-				-1.5
1,365,007	+				-0.3
1,365,008	-				-1.2
1,365,019	-				-1.2
1,365,030	-				-1.0
1,365,033	+				-1.2
1,365,034	-				-0.9
1,365,130	+				-0.0
1,365,130	+				+0.3
1,365,130	+				-1.7
1,365,130	+				-0.7
1,365,130	+				-0.1
1,365,130	+				+0.5
1,365,131	-				+0.7
1,365,139	+				+2.0