Strain Fitness in Pantoea sp. MT58 around IAI47_17660

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,747,111	-		IAI47_17655	0.25	+0.3
3,747,111	-		IAI47_17655	0.25	-1.8
3,747,136	+		IAI47_17655	0.27	+0.0
3,747,136	+		IAI47_17655	0.27	+0.0
3,747,136	+		IAI47_17655	0.27	-0.4
3,747,136	+		IAI47_17655	0.27	+0.7
3,747,136	+		IAI47_17655	0.27	+0.9
3,747,136	+		IAI47_17655	0.27	-0.3
3,747,137	-		IAI47_17655	0.27	-0.8
3,747,137	-		IAI47_17655	0.27	+1.0
3,747,137	-		IAI47_17655	0.27	+1.3
3,747,137	-		IAI47_17655	0.27	+0.1
3,747,137	-		IAI47_17655	0.27	+0.7
3,747,137	-		IAI47_17655	0.27	+0.3
3,747,247	+		IAI47_17655	0.35	+0.8
3,747,247	+		IAI47_17655	0.35	-0.5
3,747,248	-		IAI47_17655	0.35	+1.6
3,747,266	+		IAI47_17655	0.37	+1.9
3,747,349	+		IAI47_17655	0.43	-0.8
3,747,440	+		IAI47_17655	0.50	+0.6
3,747,440	+		IAI47_17655	0.50	-0.0
3,747,440	+		IAI47_17655	0.50	+1.3
3,747,440	+		IAI47_17655	0.50	-0.5
3,747,441	-		IAI47_17655	0.50	-0.3
3,747,441	-		IAI47_17655	0.50	+0.2
3,747,441	-		IAI47_17655	0.50	+0.3
3,747,463	+		IAI47_17655	0.52	-0.4
3,747,463	+		IAI47_17655	0.52	+1.2
3,747,463	+		IAI47_17655	0.52	+2.2
3,747,464	-		IAI47_17655	0.52	+0.8
3,747,464	-		IAI47_17655	0.52	-2.1
3,747,482	+		IAI47_17655	0.53	+0.1
3,747,482	+		IAI47_17655	0.53	-0.6
3,747,483	-		IAI47_17655	0.53	+2.5
3,747,483	-		IAI47_17655	0.53	+1.4
3,747,512	+		IAI47_17655	0.56	-0.7
3,747,512	+		IAI47_17655	0.56	-1.6
3,747,512	+		IAI47_17655	0.56	+1.7
3,747,512	+		IAI47_17655	0.56	+1.2
3,747,513	-		IAI47_17655	0.56	-1.2
3,747,513	-		IAI47_17655	0.56	-0.0
3,747,521	+		IAI47_17655	0.56	-2.3
3,747,521	+		IAI47_17655	0.56	-0.1
3,747,521	+		IAI47_17655	0.56	+0.6
3,747,521	+		IAI47_17655	0.56	+1.7
3,747,522	-		IAI47_17655	0.56	+0.1
3,747,522	-		IAI47_17655	0.56	-0.8
3,747,522	-		IAI47_17655	0.56	+1.6
3,747,522	-		IAI47_17655	0.56	+0.9
3,747,727	+		IAI47_17655	0.72	+0.6
3,747,727	+		IAI47_17655	0.72	-1.7
3,747,727	+		IAI47_17655	0.72	-2.1
3,747,769	+		IAI47_17655	0.75	+3.4
3,747,769	+		IAI47_17655	0.75	+1.2
3,747,769	+		IAI47_17655	0.75	+1.6
3,747,770	-		IAI47_17655	0.75	+0.8
3,747,770	-		IAI47_17655	0.75	-0.4
3,747,770	-		IAI47_17655	0.75	+1.8
3,747,770	-		IAI47_17655	0.75	-1.9
3,747,770	-		IAI47_17655	0.75	+0.9
3,747,779	-		IAI47_17655	0.76	+0.3
3,747,779	-		IAI47_17655	0.76	-0.6
3,747,800	+		IAI47_17655	0.77	+1.2
3,747,801	-		IAI47_17655	0.78	+0.8
3,747,850	+		IAI47_17655	0.81	+0.3
3,747,851	-		IAI47_17655	0.81	-0.3
3,747,851	-		IAI47_17655	0.81	-0.2
3,747,856	+		IAI47_17655	0.82	+0.1
3,747,856	+		IAI47_17655	0.82	+0.5
3,747,856	+		IAI47_17655	0.82	+0.4
3,747,856	+		IAI47_17655	0.82	+0.7
3,747,857	-		IAI47_17655	0.82	+2.5
3,747,857	-		IAI47_17655	0.82	+0.4
3,747,857	-		IAI47_17655	0.82	+0.3
3,747,857	-		IAI47_17655	0.82	-0.0
3,747,857	-		IAI47_17655	0.82	+1.5
3,747,857	-		IAI47_17655	0.82	+0.4
3,747,887	+		IAI47_17655	0.84	-0.6
3,747,887	+		IAI47_17655	0.84	-1.2
3,747,887	+		IAI47_17655	0.84	+1.6
3,747,887	+		IAI47_17655	0.84	-0.7
3,747,888	-		IAI47_17655	0.84	+1.5
3,747,888	-		IAI47_17655	0.84	-0.2
3,747,888	-		IAI47_17655	0.84	+0.8
3,747,901	+		IAI47_17655	0.85	+1.3
3,747,901	+		IAI47_17655	0.85	-0.7
3,747,901	+		IAI47_17655	0.85	-0.0
3,747,901	+		IAI47_17655	0.85	-1.1
3,747,901	+		IAI47_17655	0.85	-0.4
3,747,901	+		IAI47_17655	0.85	-1.2
3,747,901	+		IAI47_17655	0.85	-1.4
3,747,902	-		IAI47_17655	0.85	-0.5
3,747,902	-		IAI47_17655	0.85	+0.2
3,747,902	-		IAI47_17655	0.85	+0.5
3,747,902	-		IAI47_17655	0.85	-0.2
3,747,902	-		IAI47_17655	0.85	-2.5
3,747,909	-		IAI47_17655	0.86	+1.1
3,747,909	-		IAI47_17655	0.86	+0.5
3,747,909	-		IAI47_17655	0.86	+1.1
3,747,909	-		IAI47_17655	0.86	+2.6
3,748,000	+				+0.2
3,748,000	+				-0.6
3,748,000	+				+1.8
3,748,000	+				+1.4
3,748,000	+				+0.8
3,748,000	+				+1.0
3,748,000	+				-0.6
3,748,001	-				+1.2
3,748,001	-				-0.3
3,748,001	-				-0.2
3,748,001	-				+0.1
3,748,101	-				+1.0
3,748,106	+				-0.4
3,748,106	+				-0.5
3,748,106	+				-0.7
3,748,106	+				+0.4
3,748,106	+				+0.5
3,748,106	+				+0.1
3,748,106	+				+1.3
3,748,106	+				+0.4
3,748,107	-				-0.5
3,748,107	-				-1.5
3,748,139	+				-0.8
3,748,139	+				+2.4
3,748,152	+				-0.1
3,748,153	-				+0.4
3,748,153	-				+0.8
3,748,153	-				+0.6
3,748,170	-				+1.2
3,748,170	-				+0.6
3,748,202	+				+0.0
3,748,202	+				+0.6
3,748,203	-				-1.6
3,748,203	-				+1.0
3,748,271	+				+0.5
3,748,272	-				-0.6
3,748,278	+				+0.4
3,748,326	+		IAI47_17660	0.12	+0.5
3,748,327	-		IAI47_17660	0.12	+1.9
3,748,327	-		IAI47_17660	0.12	+1.4
3,748,340	+		IAI47_17660	0.13	-0.1
3,748,340	+		IAI47_17660	0.13	-0.7
3,748,341	-		IAI47_17660	0.13	-0.2
3,748,341	-		IAI47_17660	0.13	+1.6
3,748,341	-		IAI47_17660	0.13	-0.4
3,748,341	-		IAI47_17660	0.13	+1.2
3,748,416	+		IAI47_17660	0.17	+0.2
3,748,416	+		IAI47_17660	0.17	-1.5
3,748,416	+		IAI47_17660	0.17	+0.7
3,748,417	-		IAI47_17660	0.17	-1.7
3,748,417	-		IAI47_17660	0.17	-1.7
3,748,428	+		IAI47_17660	0.18	+1.2
3,748,429	-		IAI47_17660	0.18	+0.7
3,748,437	+		IAI47_17660	0.19	+0.6
3,748,437	+		IAI47_17660	0.19	+1.5
3,748,437	+		IAI47_17660	0.19	+0.1
3,748,437	+		IAI47_17660	0.19	-1.7
3,748,437	+		IAI47_17660	0.19	+0.2
3,748,437	+		IAI47_17660	0.19	+0.2
3,748,437	+		IAI47_17660	0.19	-0.7
3,748,437	+		IAI47_17660	0.19	+1.7
3,748,438	-		IAI47_17660	0.19	+0.8
3,748,502	+		IAI47_17660	0.22	-0.6
3,748,502	+		IAI47_17660	0.22	+1.4
3,748,502	+		IAI47_17660	0.22	+3.1
3,748,502	+		IAI47_17660	0.22	+1.0
3,748,502	+		IAI47_17660	0.22	+0.6
3,748,503	-		IAI47_17660	0.22	+0.8
3,748,503	-		IAI47_17660	0.22	-0.3
3,748,514	+		IAI47_17660	0.23	-0.6
3,748,514	+		IAI47_17660	0.23	-0.7
3,748,514	+		IAI47_17660	0.23	+0.7
3,748,514	+		IAI47_17660	0.23	+0.6
3,748,514	+		IAI47_17660	0.23	-3.0
3,748,514	+		IAI47_17660	0.23	-0.4
3,748,514	+		IAI47_17660	0.23	+1.5
3,748,514	+		IAI47_17660	0.23	+2.6
3,748,514	+		IAI47_17660	0.23	-0.6
3,748,514	+		IAI47_17660	0.23	-1.3
3,748,515	-		IAI47_17660	0.23	+1.2
3,748,515	-		IAI47_17660	0.23	+0.3
3,748,515	-		IAI47_17660	0.23	-0.1
3,748,515	-		IAI47_17660	0.23	-0.2
3,748,515	-		IAI47_17660	0.23	-0.8
3,748,518	+		IAI47_17660	0.23	+0.1
3,748,518	+		IAI47_17660	0.23	-0.8
3,748,518	+		IAI47_17660	0.23	+0.4
3,748,518	+		IAI47_17660	0.23	-0.3
3,748,519	-		IAI47_17660	0.23	+1.2
3,748,519	-		IAI47_17660	0.23	+0.7
3,748,519	-		IAI47_17660	0.23	+1.3
3,748,519	-		IAI47_17660	0.23	+0.2
3,748,526	-		IAI47_17660	0.24	+2.0
3,748,535	+		IAI47_17660	0.24	-2.0
3,748,535	+		IAI47_17660	0.24	-2.5
3,748,535	+		IAI47_17660	0.24	+1.1
3,748,536	-		IAI47_17660	0.24	+0.9
3,748,547	+		IAI47_17660	0.25	+0.0
3,748,548	-		IAI47_17660	0.25	-0.4
3,748,548	-		IAI47_17660	0.25	+0.8
3,748,592	+		IAI47_17660	0.27	+1.3
3,748,592	+		IAI47_17660	0.27	-0.8
3,748,592	+		IAI47_17660	0.27	+0.1
3,748,592	+		IAI47_17660	0.27	+2.1
3,748,592	+		IAI47_17660	0.27	-0.0
3,748,592	+		IAI47_17660	0.27	-0.4
3,748,592	+		IAI47_17660	0.27	-0.8
3,748,593	-		IAI47_17660	0.27	-1.7
3,748,593	-		IAI47_17660	0.27	+0.1
3,748,593	-		IAI47_17660	0.27	-0.1
3,748,593	-		IAI47_17660	0.27	-0.2
3,748,593	-		IAI47_17660	0.27	-0.2
3,748,593	-		IAI47_17660	0.27	+0.2
3,748,593	-		IAI47_17660	0.27	+0.6
3,748,632	+		IAI47_17660	0.30	-0.3
3,748,632	+		IAI47_17660	0.30	+0.6
3,748,738	-		IAI47_17660	0.35	+0.9
3,748,809	+		IAI47_17660	0.39	-0.0
3,748,810	-		IAI47_17660	0.39	+1.3
3,748,810	-		IAI47_17660	0.39	+0.6
3,748,830	+		IAI47_17660	0.41	+0.6
3,748,844	+		IAI47_17660	0.41	-0.5
3,748,845	-		IAI47_17660	0.41	+0.6
3,748,854	+		IAI47_17660	0.42	+1.4
3,748,855	-		IAI47_17660	0.42	+1.0
3,748,889	+		IAI47_17660	0.44	-0.6
3,748,889	+		IAI47_17660	0.44	-0.8
3,748,890	-		IAI47_17660	0.44	+0.7
3,748,890	-		IAI47_17660	0.44	-0.1
3,749,000	+		IAI47_17660	0.50	+0.5
3,749,000	+		IAI47_17660	0.50	+0.6
3,749,000	+		IAI47_17660	0.50	-1.7
3,749,000	+		IAI47_17660	0.50	+0.7
3,749,000	+		IAI47_17660	0.50	-0.3
3,749,000	+		IAI47_17660	0.50	+0.6
3,749,001	-		IAI47_17660	0.50	+2.2
3,749,050	+		IAI47_17660	0.53	+1.3
3,749,050	+		IAI47_17660	0.53	+0.4
3,749,050	+		IAI47_17660	0.53	+2.4
3,749,050	+		IAI47_17660	0.53	-0.2
3,749,050	+		IAI47_17660	0.53	-0.4
3,749,051	-		IAI47_17660	0.53	+2.1
3,749,051	-		IAI47_17660	0.53	+2.6
3,749,054	+		IAI47_17660	0.53	+1.2
3,749,054	+		IAI47_17660	0.53	+0.4
3,749,054	+		IAI47_17660	0.53	-0.2
3,749,054	+		IAI47_17660	0.53	+1.2
3,749,054	+		IAI47_17660	0.53	+0.3
3,749,054	+		IAI47_17660	0.53	+0.6
3,749,054	+		IAI47_17660	0.53	+0.1
3,749,054	+		IAI47_17660	0.53	-2.1
3,749,054	+		IAI47_17660	0.53	+1.0
3,749,054	+		IAI47_17660	0.53	-0.4
3,749,055	-		IAI47_17660	0.53	+1.0
3,749,055	-		IAI47_17660	0.53	+0.0
3,749,055	-		IAI47_17660	0.53	-0.4
3,749,055	-		IAI47_17660	0.53	+1.6
3,749,055	-		IAI47_17660	0.53	+2.2
3,749,055	-		IAI47_17660	0.53	-0.6
3,749,055	-		IAI47_17660	0.53	-0.1
3,749,055	-		IAI47_17660	0.53	-1.8
3,749,055	-		IAI47_17660	0.53	-0.6
3,749,055	-		IAI47_17660	0.53	+0.2
3,749,055	-		IAI47_17660	0.53	-1.2
3,749,055	-		IAI47_17660	0.53	-0.4
3,749,055	-		IAI47_17660	0.53	-0.2
3,749,055	-		IAI47_17660	0.53	+1.2
3,749,056	-		IAI47_17660	0.53	+0.4
3,749,107	-		IAI47_17660	0.56	+0.4
3,749,133	-		IAI47_17660	0.58	+0.8
3,749,133	-		IAI47_17660	0.58	+1.6
3,749,133	-		IAI47_17660	0.58	+0.3
3,749,133	-		IAI47_17660	0.58	-0.8
3,749,138	+		IAI47_17660	0.58	+0.5
3,749,138	+		IAI47_17660	0.58	-0.9
3,749,138	+		IAI47_17660	0.58	+0.4
3,749,138	+		IAI47_17660	0.58	-0.6
3,749,138	+		IAI47_17660	0.58	+1.2
3,749,138	+		IAI47_17660	0.58	-0.0
3,749,138	+		IAI47_17660	0.58	-1.4
3,749,138	+		IAI47_17660	0.58	+1.0
3,749,138	+		IAI47_17660	0.58	+1.1
3,749,138	+		IAI47_17660	0.58	+0.3
3,749,138	+		IAI47_17660	0.58	+1.5
3,749,138	+		IAI47_17660	0.58	+0.7
3,749,139	-		IAI47_17660	0.58	+2.1
3,749,139	-		IAI47_17660	0.58	-0.8
3,749,139	-		IAI47_17660	0.58	+1.2
3,749,139	-		IAI47_17660	0.58	-0.4
3,749,139	-		IAI47_17660	0.58	-0.4
3,749,139	-		IAI47_17660	0.58	-0.1
3,749,139	-		IAI47_17660	0.58	+0.4
3,749,139	-		IAI47_17660	0.58	-0.2
3,749,139	-		IAI47_17660	0.58	-0.0
3,749,195	+		IAI47_17660	0.61	+0.9
3,749,195	+		IAI47_17660	0.61	-0.2
3,749,195	+		IAI47_17660	0.61	-0.1
3,749,195	+		IAI47_17660	0.61	-1.7
3,749,195	+		IAI47_17660	0.61	+1.2
3,749,196	-		IAI47_17660	0.61	-1.2
3,749,196	-		IAI47_17660	0.61	+0.2
3,749,196	-		IAI47_17660	0.61	+1.3
3,749,196	-		IAI47_17660	0.61	+2.9
3,749,196	-		IAI47_17660	0.61	-1.1
3,749,196	-		IAI47_17660	0.61	+1.4
3,749,196	-		IAI47_17660	0.61	+0.1
3,749,196	-		IAI47_17660	0.61	-1.6
3,749,199	+		IAI47_17660	0.61	-0.7
3,749,199	+		IAI47_17660	0.61	-0.4
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