Strain Fitness in Pantoea sp. MT58 around IAI47_17585

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,728,892	-				+0.9
3,728,904	+				+0.9
3,728,906	+				+0.5
3,728,906	+				-1.1
3,728,906	+				+0.8
3,728,940	+				+0.3
3,728,948	+				+0.5
3,728,949	-				-1.5
3,728,949	-				+0.4
3,728,949	-				-1.5
3,728,949	-				-0.5
3,728,958	+				-1.5
3,728,987	+				-0.6
3,729,003	-		IAI47_17580	0.11	-0.9
3,729,004	+		IAI47_17580	0.11	-1.3
3,729,005	-		IAI47_17580	0.12	+0.2
3,729,005	-		IAI47_17580	0.12	-1.7
3,729,006	+		IAI47_17580	0.12	-0.1
3,729,013	+		IAI47_17580	0.13	-2.3
3,729,013	+		IAI47_17580	0.13	-2.3
3,729,013	+		IAI47_17580	0.13	-2.1
3,729,014	-		IAI47_17580	0.13	-3.8
3,729,014	-		IAI47_17580	0.13	+1.6
3,729,018	+		IAI47_17580	0.13	-1.8
3,729,019	-		IAI47_17580	0.14	+0.5
3,729,027	+		IAI47_17580	0.15	-1.7
3,729,027	+		IAI47_17580	0.15	-1.5
3,729,027	+		IAI47_17580	0.15	-1.6
3,729,027	+		IAI47_17580	0.15	+0.7
3,729,028	-		IAI47_17580	0.15	-3.6
3,729,040	-		IAI47_17580	0.17	-1.6
3,729,045	+		IAI47_17580	0.18	-3.2
3,729,046	-		IAI47_17580	0.18	-0.5
3,729,046	-		IAI47_17580	0.18	-0.5
3,729,046	-		IAI47_17580	0.18	-0.4
3,729,064	+		IAI47_17580	0.20	-0.4
3,729,064	+		IAI47_17580	0.20	-1.6
3,729,065	-		IAI47_17580	0.21	-0.7
3,729,065	-		IAI47_17580	0.21	-2.4
3,729,067	-		IAI47_17580	0.21	-1.6
3,729,107	+		IAI47_17580	0.27	-1.2
3,729,107	+		IAI47_17580	0.27	-2.2
3,729,107	+		IAI47_17580	0.27	-1.3
3,729,107	+		IAI47_17580	0.27	-0.6
3,729,111	+		IAI47_17580	0.28	-0.3
3,729,111	+		IAI47_17580	0.28	-0.3
3,729,111	+		IAI47_17580	0.28	-3.8
3,729,111	+		IAI47_17580	0.28	-0.5
3,729,114	+		IAI47_17580	0.28	-3.6
3,729,165	-		IAI47_17580	0.36	-1.9
3,729,223	+		IAI47_17580	0.45	-2.9
3,729,224	-		IAI47_17580	0.45	+0.7
3,729,224	-		IAI47_17580	0.45	-0.7
3,729,224	-		IAI47_17580	0.45	+0.9
3,729,224	-		IAI47_17580	0.45	-1.3
3,729,233	+		IAI47_17580	0.46	+0.1
3,729,233	+		IAI47_17580	0.46	+0.4
3,729,261	-		IAI47_17580	0.50	-2.5
3,729,261	-		IAI47_17580	0.50	-2.0
3,729,275	+		IAI47_17580	0.52	+0.4
3,729,306	-		IAI47_17580	0.57	-2.2
3,729,306	-		IAI47_17580	0.57	-1.5
3,729,366	-		IAI47_17580	0.66	-1.4
3,729,390	+		IAI47_17580	0.70	-1.1
3,729,390	+		IAI47_17580	0.70	-1.0
3,729,390	+		IAI47_17580	0.70	-0.9
3,729,391	-		IAI47_17580	0.70	-2.1
3,729,391	-		IAI47_17580	0.70	-2.0
3,729,391	-		IAI47_17580	0.70	-1.1
3,729,391	-		IAI47_17580	0.70	+0.0
3,729,420	+		IAI47_17580	0.74	-1.3
3,729,421	-		IAI47_17580	0.75	-2.0
3,729,425	-		IAI47_17580	0.75	-1.3
3,729,450	+		IAI47_17580	0.79	-1.3
3,729,451	-		IAI47_17580	0.79	-0.0
3,729,498	+		IAI47_17580	0.86	-1.5
3,729,498	+		IAI47_17580	0.86	+0.7
3,729,498	+		IAI47_17580	0.86	-0.1
3,729,498	+		IAI47_17580	0.86	-2.6
3,729,498	+		IAI47_17580	0.86	-0.1
3,729,499	-		IAI47_17580	0.86	-1.4
3,729,533	+				-0.5
3,729,534	-				-2.1
3,729,534	-				-2.1
3,729,534	-				-3.1
3,729,576	+				+0.4
3,729,576	+				-0.5
3,729,577	-				-2.7
3,729,577	-				-0.6
3,729,636	-				-0.1
3,729,645	+				+0.5
3,729,656	-				-0.2
3,729,665	+				+0.5
3,729,665	+				-0.3
3,729,665	+				+2.4
3,729,669	-				-1.0
3,729,680	+				-1.8
3,729,690	-				-0.3
3,729,695	-				-0.9
3,729,724	+				+1.2
3,729,724	+				+0.2
3,729,725	-				+2.1
3,729,726	+				-1.0
3,729,727	-				+2.1
3,729,727	-				-0.3
3,729,733	+				-1.0
3,729,733	+				-0.0
3,729,734	-				+0.2
3,729,757	-				+0.8
3,729,768	+				+0.6
3,729,769	-				-0.5
3,729,769	-				+0.4
3,729,784	+				-0.3
3,729,795	-				+0.7
3,729,801	+				-0.2
3,729,816	+				+0.3
3,729,816	+				+0.7
3,729,840	-				+1.9
3,729,864	+				+2.7
3,729,864	+				+2.1
3,729,893	+				+1.0
3,729,911	+				+1.0
3,729,912	-				+0.4
3,729,912	-				-0.1
3,729,939	+				+0.6
3,729,940	-				-1.3
3,729,940	-				+0.6
3,729,940	-				+1.4
3,729,985	+				-0.0
3,729,985	+				+1.3
3,729,985	+				+0.7
3,729,986	-				+1.0
3,729,986	-				+1.6
3,729,986	-				-0.3
3,729,988	+				-0.3
3,729,988	+				-0.8
3,729,988	+				+0.6
3,729,989	-				+1.6
3,729,989	-				-0.3
3,729,989	-				+0.2
3,730,008	+				+0.6
3,730,008	+				+0.2
3,730,008	+				+0.4
3,730,008	+				+1.1
3,730,009	-				+0.3
3,730,009	-				-1.6
3,730,009	-				+0.1
3,730,009	-				+1.8
3,730,009	-				+1.4
3,730,014	+				+1.2
3,730,014	+				-0.7
3,730,014	+				+0.5
3,730,014	+				-0.7
3,730,014	+				+2.7
3,730,015	-				-0.1
3,730,015	-				+0.5
3,730,015	-				+1.0
3,730,015	-				-0.2
3,730,015	-				-0.1
3,730,024	+				+1.7
3,730,024	+				-0.3
3,730,025	-				-0.4
3,730,025	-				+0.7
3,730,063	+				-0.3
3,730,063	+				+1.4
3,730,064	-				-0.1
3,730,270	+		IAI47_17585	0.17	+0.5
3,730,271	-		IAI47_17585	0.17	+1.3
3,730,271	-		IAI47_17585	0.17	+0.2
3,730,271	-		IAI47_17585	0.17	-0.3
3,730,277	+		IAI47_17585	0.17	+1.5
3,730,296	+		IAI47_17585	0.18	+1.2
3,730,310	+		IAI47_17585	0.19	+0.1
3,730,311	-		IAI47_17585	0.19	+1.2
3,730,341	+		IAI47_17585	0.20	+0.3
3,730,342	-		IAI47_17585	0.20	-1.1
3,730,428	+		IAI47_17585	0.24	-1.3
3,730,429	-		IAI47_17585	0.24	+1.2
3,730,429	-		IAI47_17585	0.24	-0.6
3,730,429	-		IAI47_17585	0.24	-1.0
3,730,533	+		IAI47_17585	0.28	+1.2
3,730,552	+		IAI47_17585	0.29	+1.1
3,730,552	+		IAI47_17585	0.29	-1.1
3,730,552	+		IAI47_17585	0.29	+1.0
3,730,553	-		IAI47_17585	0.29	-0.4
3,730,553	-		IAI47_17585	0.29	+0.4
3,730,553	-		IAI47_17585	0.29	-1.8
3,730,553	-		IAI47_17585	0.29	+0.9
3,730,553	-		IAI47_17585	0.29	-1.0
3,730,553	-		IAI47_17585	0.29	+3.5
3,730,553	-		IAI47_17585	0.29	+0.7
3,730,553	-		IAI47_17585	0.29	+1.2
3,730,553	-		IAI47_17585	0.29	-0.7
3,730,740	+		IAI47_17585	0.37	+0.5
3,730,740	+		IAI47_17585	0.37	+0.7
3,730,740	+		IAI47_17585	0.37	-0.8
3,730,741	-		IAI47_17585	0.37	+0.7
3,730,741	-		IAI47_17585	0.37	-0.4
3,730,741	-		IAI47_17585	0.37	+0.6
3,730,741	-		IAI47_17585	0.37	+0.6
3,730,741	-		IAI47_17585	0.37	+0.2
3,730,741	-		IAI47_17585	0.37	+0.2
3,730,741	-		IAI47_17585	0.37	+0.8
3,730,744	+		IAI47_17585	0.37	+0.3
3,730,744	+		IAI47_17585	0.37	+0.9
3,730,745	-		IAI47_17585	0.37	-1.2
3,730,842	+		IAI47_17585	0.41	+0.4
3,730,842	+		IAI47_17585	0.41	-1.2
3,730,842	+		IAI47_17585	0.41	-0.2
3,730,842	+		IAI47_17585	0.41	+0.9
3,730,842	+		IAI47_17585	0.41	-0.9
3,730,843	-		IAI47_17585	0.41	+0.8
3,730,843	-		IAI47_17585	0.41	-0.3
3,730,843	-		IAI47_17585	0.41	+1.0
3,730,843	-		IAI47_17585	0.41	-0.7
3,730,843	-		IAI47_17585	0.41	+0.8
3,730,866	+		IAI47_17585	0.42	+0.1
3,730,866	+		IAI47_17585	0.42	-0.6
3,730,867	-		IAI47_17585	0.42	-0.5
3,730,867	-		IAI47_17585	0.42	+1.6
3,730,867	-		IAI47_17585	0.42	+1.4
3,730,867	-		IAI47_17585	0.42	+0.7
3,730,867	-		IAI47_17585	0.42	+0.1
3,730,870	+		IAI47_17585	0.42	+0.7
3,730,870	+		IAI47_17585	0.42	+1.2
3,730,870	+		IAI47_17585	0.42	+0.6
3,730,870	+		IAI47_17585	0.42	+1.7
3,730,870	+		IAI47_17585	0.42	-0.1
3,730,870	+		IAI47_17585	0.42	+1.6
3,730,870	+		IAI47_17585	0.42	-0.7
3,730,870	+		IAI47_17585	0.42	-1.0
3,730,870	+		IAI47_17585	0.42	+1.7
3,730,871	-		IAI47_17585	0.42	+1.3
3,730,871	-		IAI47_17585	0.42	+1.0
3,730,871	-		IAI47_17585	0.42	-0.6
3,730,871	-		IAI47_17585	0.42	+0.4
3,730,896	+		IAI47_17585	0.43	+0.0
3,730,897	-		IAI47_17585	0.43	-0.2
3,730,902	+		IAI47_17585	0.43	+2.3
3,730,902	+		IAI47_17585	0.43	+2.0
3,730,902	+		IAI47_17585	0.43	+0.2
3,730,902	+		IAI47_17585	0.43	-0.1
3,730,903	-		IAI47_17585	0.43	+1.1
3,730,903	-		IAI47_17585	0.43	-1.1
3,730,903	-		IAI47_17585	0.43	+0.9
3,731,006	+		IAI47_17585	0.48	+2.3
3,731,007	-		IAI47_17585	0.48	+0.2
3,731,038	-		IAI47_17585	0.49	+2.8
3,731,038	-		IAI47_17585	0.49	+0.9
3,731,038	-		IAI47_17585	0.49	+0.7
3,731,098	+		IAI47_17585	0.52	+0.9
3,731,098	+		IAI47_17585	0.52	-0.8
3,731,098	+		IAI47_17585	0.52	-1.0
3,731,099	-		IAI47_17585	0.52	-0.0
3,731,122	+		IAI47_17585	0.53	+1.7
3,731,122	+		IAI47_17585	0.53	+0.9
3,731,123	-		IAI47_17585	0.53	+2.0
3,731,189	-		IAI47_17585	0.55	-0.5
3,731,201	+		IAI47_17585	0.56	-0.2
3,731,201	+		IAI47_17585	0.56	+0.7
3,731,201	+		IAI47_17585	0.56	+1.7
3,731,202	-		IAI47_17585	0.56	+1.7
3,731,242	+		IAI47_17585	0.58	+0.5
3,731,243	-		IAI47_17585	0.58	+1.6
3,731,243	-		IAI47_17585	0.58	-0.1
3,731,243	-		IAI47_17585	0.58	+1.0
3,731,243	-		IAI47_17585	0.58	+0.7
3,731,243	-		IAI47_17585	0.58	+0.9
3,731,272	-		IAI47_17585	0.59	+0.1
3,731,304	+		IAI47_17585	0.60	-0.3
3,731,304	+		IAI47_17585	0.60	-0.6
3,731,330	+		IAI47_17585	0.61	+0.4
3,731,331	-		IAI47_17585	0.61	+0.2
3,731,341	+		IAI47_17585	0.62	-0.6
3,731,364	+		IAI47_17585	0.63	-0.2
3,731,365	-		IAI47_17585	0.63	+0.3
3,731,365	-		IAI47_17585	0.63	+0.9
3,731,399	+		IAI47_17585	0.64	+0.5
3,731,399	+		IAI47_17585	0.64	+2.2
3,731,399	+		IAI47_17585	0.64	+0.6
3,731,399	+		IAI47_17585	0.64	+2.2
3,731,400	-		IAI47_17585	0.64	-0.5
3,731,400	-		IAI47_17585	0.64	+0.9
3,731,400	-		IAI47_17585	0.64	+0.2
3,731,400	-		IAI47_17585	0.64	+1.0
3,731,400	-		IAI47_17585	0.64	+0.1
3,731,400	-		IAI47_17585	0.64	-0.1
3,731,440	-		IAI47_17585	0.66	-0.8
3,731,471	-		IAI47_17585	0.67	+0.0
3,731,579	-		IAI47_17585	0.72	-0.2
3,731,579	-		IAI47_17585	0.72	-0.1
3,731,579	-		IAI47_17585	0.72	+1.0
3,731,640	+		IAI47_17585	0.74	+0.0
3,731,640	+		IAI47_17585	0.74	+1.4
3,731,640	+		IAI47_17585	0.74	+1.3
3,731,641	-		IAI47_17585	0.74	+0.2
3,731,641	-		IAI47_17585	0.74	+1.0
3,731,641	-		IAI47_17585	0.74	+1.1
3,731,641	-		IAI47_17585	0.74	+1.1
3,731,694	+		IAI47_17585	0.76	-1.0
3,731,722	-		IAI47_17585	0.78	+1.1
3,731,722	-		IAI47_17585	0.78	+0.4
3,731,722	-		IAI47_17585	0.78	+0.2
3,731,722	-		IAI47_17585	0.78	+0.5
3,731,787	+		IAI47_17585	0.80	+1.1
3,731,788	-		IAI47_17585	0.80	+0.7
3,731,799	+		IAI47_17585	0.81	-1.0
3,731,812	+		IAI47_17585	0.81	-0.7
3,731,813	-		IAI47_17585	0.81	+0.7
3,731,813	-		IAI47_17585	0.81	-0.3
3,731,813	-		IAI47_17585	0.81	+0.5
3,731,813	-		IAI47_17585	0.81	+0.1
3,731,825	-		IAI47_17585	0.82	+1.2
3,731,890	+		IAI47_17585	0.85	+1.6
3,731,890	+		IAI47_17585	0.85	+0.3
3,731,890	+		IAI47_17585	0.85	+0.4
3,731,890	+		IAI47_17585	0.85	-0.5
3,731,891	-		IAI47_17585	0.85	+0.8
3,731,891	-		IAI47_17585	0.85	-0.3
3,731,891	-		IAI47_17585	0.85	+1.7
3,731,891	-		IAI47_17585	0.85	+1.1
3,731,891	-		IAI47_17585	0.85	+0.3
3,731,891	-		IAI47_17585	0.85	+0.6
3,731,891	-		IAI47_17585	0.85	+0.9
3,731,891	-		IAI47_17585	0.85	+0.8
3,732,032	+				+1.7
3,732,032	+				+0.0
3,732,032	+				+0.2
3,732,032	+				+0.7
3,732,033	-				-0.0
3,732,033	-				-2.3
3,732,057	+				-0.2
3,732,057	+				+1.8
3,732,057	+				+0.6
3,732,057	+				+0.7
3,732,058	-				+1.0
3,732,058	-				+0.3
3,732,058	-				+1.3
3,732,058	-				+1.7
3,732,061	+				-0.5
3,732,061	+				+0.1
3,732,061	+				-0.4
3,732,062	-				+1.1
3,732,062	-				+0.1
3,732,062	-				+0.1
3,732,062	-				-0.8
3,732,062	-				-1.4
3,732,062	-				+0.4
3,732,145	+				+1.7
3,732,145	+				-1.5
3,732,145	+				-1.0
3,732,145	+				+1.4
3,732,145	+				+2.1
3,732,145	+				-0.6
3,732,145	+				+2.7
3,732,145	+				+0.5
3,732,145	+				+1.7
3,732,145	+				+1.3
3,732,146	-				+1.2
3,732,146	-				+2.1
3,732,146	-				+2.2
3,732,146	-				+0.2
3,732,146	-				-0.1
3,732,146	-				+1.2
3,732,146	-				+1.3
3,732,146	-				-0.2
3,732,146	-				+1.3
3,732,146	-				+0.9
3,732,166	+				-0.5
3,732,166	+				-0.5
3,732,166	+				-0.4
3,732,166	+				+0.2
3,732,166	+				+1.1
3,732,167	-				-0.1
3,732,167	-				-0.9
3,732,167	-				+2.3
3,732,167	-				+0.6
3,732,167	-				+0.5
3,732,167	-				-1.2
3,732,167	-				-1.3
3,732,167	-				+0.7
3,732,204	+				-0.3
3,732,220	+				+1.2
3,732,220	+				+1.0
3,732,220	+				+0.4
3,732,220	+				+0.9
3,732,220	+				+0.5
3,732,220	+				-0.0
3,732,220	+				+0.8
3,732,220	+				+0.8
3,732,221	-				+2.4
3,732,221	-				+1.0
3,732,221	-				+0.3
3,732,221	-				+0.5
3,732,221	-				+0.5
3,732,221	-				+0.1
3,732,221	-				+0.2
3,732,221	-				+0.2
3,732,239	+				+1.1
3,732,239	+				+0.7
3,732,239	+				+0.6
3,732,239	+				-0.6
3,732,240	-				+0.3
3,732,240	-				+0.5
3,732,240	-				-1.3
3,732,254	-				+0.9
3,732,254	-				+1.4
3,732,313	+				+0.9
3,732,313	+				+0.4
3,732,335	+				+0.7
3,732,335	+				-0.5
3,732,335	+				-1.8
3,732,335	+				-1.0
3,732,336	-				+1.9
3,732,336	-				-1.0
3,732,336	-				+0.2
3,732,351	+				-0.8
3,732,352	-				-1.2
3,732,357	+				+0.9
3,732,357	+				-0.9
3,732,357	+				+0.1
3,732,357	+				-1.9
3,732,358	-				+0.3
3,732,358	-				-0.0
3,732,358	-				-1.7
3,732,358	-				-0.5
3,732,443	+		IAI47_17590	0.11	+0.4
3,732,443	+		IAI47_17590	0.11	-1.3
3,732,443	+		IAI47_17590	0.11	-1.0
3,732,444	-		IAI47_17590	0.11	+1.5
3,732,444	-		IAI47_17590	0.11	+1.2
3,732,444	-		IAI47_17590	0.11	+1.2
3,732,444	-		IAI47_17590	0.11	+0.7
3,732,444	-		IAI47_17590	0.11	+0.2
3,732,445	+		IAI47_17590	0.11	-0.8
3,732,445	+		IAI47_17590	0.11	+1.7
3,732,445	+		IAI47_17590	0.11	+1.4
3,732,445	+		IAI47_17590	0.11	+0.5
3,732,445	+		IAI47_17590	0.11	+0.5
3,732,446	-		IAI47_17590	0.11	+1.5
3,732,446	-		IAI47_17590	0.11	-0.5
3,732,446	-		IAI47_17590	0.11	-0.3
3,732,446	-		IAI47_17590	0.11	+2.0
3,732,446	-		IAI47_17590	0.11	-0.7
3,732,446	-		IAI47_17590	0.11	-2.4
3,732,446	-		IAI47_17590	0.11	-0.9
3,732,500	+		IAI47_17590	0.16	-1.1
3,732,501	-		IAI47_17590	0.16	+0.5
3,732,501	-		IAI47_17590	0.16	-1.0
3,732,564	+		IAI47_17590	0.21	+1.7
3,732,565	-		IAI47_17590	0.21	-0.9
3,732,567	+		IAI47_17590	0.21	-0.3
3,732,567	+		IAI47_17590	0.21	+0.1
3,732,568	-		IAI47_17590	0.21	+0.2
3,732,568	-		IAI47_17590	0.21	-1.2
3,732,568	-		IAI47_17590	0.21	+0.4
3,732,568	-		IAI47_17590	0.21	-0.7
3,732,593	+		IAI47_17590	0.23	+0.4
3,732,593	+		IAI47_17590	0.23	-0.8
3,732,594	-		IAI47_17590	0.23	+1.0
3,732,594	-		IAI47_17590	0.23	+0.5
3,732,594	-		IAI47_17590	0.23	-0.5
3,732,781	+		IAI47_17590	0.39	+0.1
3,732,781	+		IAI47_17590	0.39	-0.3
3,732,781	+		IAI47_17590	0.39	-1.0
3,732,781	+		IAI47_17590	0.39	+0.8
3,732,781	+		IAI47_17590	0.39	+0.1
3,732,781	+		IAI47_17590	0.39	+0.0
3,732,781	+		IAI47_17590	0.39	+1.1
3,732,781	+		IAI47_17590	0.39	+0.6
3,732,781	+		IAI47_17590	0.39	-2.0
3,732,781	+		IAI47_17590	0.39	-0.0
3,732,782	-		IAI47_17590	0.39	+1.0
3,732,782	-		IAI47_17590	0.39	+0.8
3,732,782	-		IAI47_17590	0.39	-1.0
3,732,782	-		IAI47_17590	0.39	+0.5
3,732,782	-		IAI47_17590	0.39	+0.7
3,732,782	-		IAI47_17590	0.39	+0.7
3,732,792	-		IAI47_17590	0.40	-1.3
3,732,939	+		IAI47_17590	0.52	-0.3
3,733,033	-		IAI47_17590	0.60	+0.4
3,733,061	+		IAI47_17590	0.62	+0.3
3,733,062	-		IAI47_17590	0.62	-2.2
3,733,062	-		IAI47_17590	0.62	+1.6
3,733,147	+		IAI47_17590	0.69	-0.4
3,733,147	+		IAI47_17590	0.69	-0.1