Strain Fitness in Pantoea sp. MT58 around IAI47_14830

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,125,881	+		IAI47_14825	0.63	-0.7
3,125,882	-		IAI47_14825	0.63	-0.7
3,125,882	-		IAI47_14825	0.63	-0.3
3,125,898	+		IAI47_14825	0.64	-1.8
3,125,898	+		IAI47_14825	0.64	-1.4
3,125,899	-		IAI47_14825	0.64	-0.6
3,125,899	-		IAI47_14825	0.64	-0.9
3,125,905	+		IAI47_14825	0.64	+0.2
3,125,905	+		IAI47_14825	0.64	-1.8
3,125,930	+		IAI47_14825	0.66	-1.3
3,125,937	+		IAI47_14825	0.67	-0.7
3,125,938	-		IAI47_14825	0.67	-1.4
3,126,042	+		IAI47_14825	0.75	+1.9
3,126,042	+		IAI47_14825	0.75	+1.1
3,126,042	+		IAI47_14825	0.75	-0.7
3,126,043	-		IAI47_14825	0.75	-1.5
3,126,043	-		IAI47_14825	0.75	-0.9
3,126,043	-		IAI47_14825	0.75	-2.8
3,126,043	-		IAI47_14825	0.75	-0.5
3,126,043	-		IAI47_14825	0.75	-0.5
3,126,043	-		IAI47_14825	0.75	+0.1
3,126,054	-		IAI47_14825	0.76	-1.5
3,126,054	-		IAI47_14825	0.76	-2.2
3,126,054	-		IAI47_14825	0.76	-1.2
3,126,061	+		IAI47_14825	0.77	+1.5
3,126,148	+		IAI47_14825	0.84	-0.4
3,126,201	+		IAI47_14825	0.88	-2.2
3,126,202	-		IAI47_14825	0.88	-1.6
3,126,202	-		IAI47_14825	0.88	-0.3
3,126,212	+		IAI47_14825	0.89	-0.9
3,126,212	+		IAI47_14825	0.89	-0.3
3,126,213	-		IAI47_14825	0.89	+1.2
3,126,213	-		IAI47_14825	0.89	-0.3
3,126,215	+		IAI47_14825	0.89	+0.6
3,126,215	+		IAI47_14825	0.89	+1.5
3,126,215	+		IAI47_14825	0.89	-0.3
3,126,215	+		IAI47_14825	0.89	+0.0
3,126,215	+		IAI47_14825	0.89	+1.5
3,126,216	-		IAI47_14825	0.89	-1.5
3,126,216	-		IAI47_14825	0.89	+0.3
3,126,216	-		IAI47_14825	0.89	+0.5
3,126,216	-		IAI47_14825	0.89	+1.7
3,126,216	-		IAI47_14825	0.89	-0.3
3,126,249	+				+1.1
3,126,249	+				+1.5
3,126,250	-				+0.1
3,126,250	-				+0.2
3,126,250	-				+0.0
3,126,274	+				-0.2
3,126,342	-				+0.8
3,126,342	-				+0.1
3,126,342	-				+0.8
3,126,342	-				-0.6
3,126,342	-				-0.5
3,126,342	-				-0.7
3,126,361	+				+0.5
3,126,362	-				+0.0
3,126,396	-				-0.5
3,126,396	-				+0.6
3,126,398	+				+2.0
3,126,398	+				-0.8
3,126,399	-				-0.8
3,126,399	-				+0.8
3,126,399	-				-0.8
3,126,415	-				+0.7
3,126,434	+				+0.9
3,126,434	+				-0.5
3,126,435	-				-1.9
3,126,440	+				+0.3
3,126,441	-				-0.1
3,126,441	-				-1.3
3,126,458	-				-1.2
3,126,481	-				-0.0
3,126,485	+				+0.8
3,126,485	+				-1.2
3,126,486	-				+1.1
3,126,489	+				+0.1
3,126,490	-				+0.5
3,126,490	-				+0.5
3,126,490	-				-1.0
3,126,507	-				+0.3
3,126,510	-				-0.6
3,126,514	-				-1.7
3,126,562	+				-1.5
3,126,575	-				-0.4
3,126,578	-				+0.1
3,126,578	-				+1.9
3,126,594	+				+0.1
3,126,595	-				-0.3
3,126,595	-				+2.5
3,126,658	-				+0.7
3,126,692	+				-1.1
3,126,704	+				-0.9
3,126,734	-				+1.1
3,126,734	-				-0.4
3,126,734	-				-0.4
3,126,741	-				-0.7
3,126,741	-				+1.3
3,126,741	-				-0.4
3,126,741	-				-1.5
3,126,741	-				-1.1
3,126,751	+				+0.5
3,126,752	-				-0.4
3,126,783	+				-0.3
3,126,784	-				+1.0
3,126,784	-				-1.9
3,126,788	-				-2.5
3,126,788	-				-0.1
3,126,820	+				+2.5
3,126,820	+				-0.4
3,126,821	-				+0.8
3,126,821	-				+0.7
3,126,821	-				-0.4
3,126,821	-				-0.1
3,126,877	-				+1.1
3,126,877	-				-1.6
3,126,888	+				-0.4
3,126,888	+				-1.0
3,126,888	+				+1.5
3,126,888	+				+0.4
3,126,888	+				-1.3
3,126,889	-				+0.3
3,126,889	-				-1.1
3,126,890	+				-1.8
3,126,891	-				+0.1
3,126,904	+				-0.2
3,126,904	+				+0.6
3,126,904	+				-0.8
3,126,905	-				-0.1
3,126,911	-				+0.4
3,126,911	-				+0.8
3,126,921	+				+0.5
3,126,921	+				-0.9
3,126,929	+				-1.1
3,126,929	+				+0.7
3,126,929	+				+0.3
3,126,929	+				-0.0
3,126,929	+				-0.4
3,126,930	-				+0.7
3,126,930	-				+0.1
3,126,930	-				-0.2
3,126,930	-				-0.9
3,126,930	-				-2.1
3,126,930	-				-0.3
3,126,939	+				+0.2
3,126,940	-				+0.2
3,126,956	+				+0.3
3,127,041	+		IAI47_14830	0.13	+0.1
3,127,042	-		IAI47_14830	0.13	+0.2
3,127,042	-		IAI47_14830	0.13	-0.2
3,127,042	-		IAI47_14830	0.13	+0.4
3,127,042	-		IAI47_14830	0.13	-0.8
3,127,111	+		IAI47_14830	0.18	+0.6
3,127,111	+		IAI47_14830	0.18	-1.2
3,127,111	+		IAI47_14830	0.18	+0.5
3,127,111	+		IAI47_14830	0.18	-0.1
3,127,111	+		IAI47_14830	0.18	-0.2
3,127,112	-		IAI47_14830	0.18	-0.3
3,127,112	-		IAI47_14830	0.18	+0.0
3,127,112	-		IAI47_14830	0.18	+1.3
3,127,112	-		IAI47_14830	0.18	+0.0
3,127,169	+		IAI47_14830	0.22	+0.3
3,127,169	+		IAI47_14830	0.22	-0.3
3,127,169	+		IAI47_14830	0.22	+0.8
3,127,170	-		IAI47_14830	0.23	+1.5
3,127,170	-		IAI47_14830	0.23	+0.5
3,127,170	-		IAI47_14830	0.23	-0.6
3,127,170	-		IAI47_14830	0.23	-1.0
3,127,170	-		IAI47_14830	0.23	+1.4
3,127,178	+		IAI47_14830	0.23	+0.5
3,127,178	+		IAI47_14830	0.23	-0.7
3,127,178	+		IAI47_14830	0.23	-0.4
3,127,179	-		IAI47_14830	0.23	+0.7
3,127,251	+		IAI47_14830	0.29	-1.9
3,127,252	-		IAI47_14830	0.29	-0.6
3,127,252	-		IAI47_14830	0.29	+0.6
3,127,252	-		IAI47_14830	0.29	+0.5
3,127,260	+		IAI47_14830	0.29	-0.1
3,127,261	-		IAI47_14830	0.29	+1.0
3,127,323	+		IAI47_14830	0.34	+1.2
3,127,324	-		IAI47_14830	0.34	+0.5
3,127,365	+		IAI47_14830	0.37	+0.5
3,127,366	-		IAI47_14830	0.37	+0.5
3,127,429	+		IAI47_14830	0.42	+0.8
3,127,429	+		IAI47_14830	0.42	-0.7
3,127,429	+		IAI47_14830	0.42	+0.4
3,127,429	+		IAI47_14830	0.42	+1.0
3,127,430	-		IAI47_14830	0.42	+0.4
3,127,445	+		IAI47_14830	0.43	-1.0
3,127,445	+		IAI47_14830	0.43	-1.4
3,127,445	+		IAI47_14830	0.43	+0.1
3,127,445	+		IAI47_14830	0.43	-0.0
3,127,445	+		IAI47_14830	0.43	+0.2
3,127,445	+		IAI47_14830	0.43	-0.6
3,127,445	+		IAI47_14830	0.43	-1.5
3,127,446	-		IAI47_14830	0.43	-0.7
3,127,446	-		IAI47_14830	0.43	-0.2
3,127,446	-		IAI47_14830	0.43	-0.7
3,127,455	+		IAI47_14830	0.44	-1.5
3,127,455	+		IAI47_14830	0.44	-2.0
3,127,455	+		IAI47_14830	0.44	+0.3
3,127,456	-		IAI47_14830	0.44	+0.2
3,127,456	-		IAI47_14830	0.44	-1.0
3,127,478	+		IAI47_14830	0.45	+0.9
3,127,478	+		IAI47_14830	0.45	-0.4
3,127,478	+		IAI47_14830	0.45	-2.0
3,127,478	+		IAI47_14830	0.45	+1.1
3,127,478	+		IAI47_14830	0.45	-0.2
3,127,478	+		IAI47_14830	0.45	-0.7
3,127,478	+		IAI47_14830	0.45	-0.6
3,127,478	+		IAI47_14830	0.45	-0.8
3,127,479	-		IAI47_14830	0.45	-0.3
3,127,479	-		IAI47_14830	0.45	+0.2
3,127,479	-		IAI47_14830	0.45	-0.4
3,127,479	-		IAI47_14830	0.45	+0.2
3,127,479	-		IAI47_14830	0.45	+0.7
3,127,479	-		IAI47_14830	0.45	+0.3
3,127,479	-		IAI47_14830	0.45	-0.4
3,127,479	-		IAI47_14830	0.45	-2.3
3,127,479	-		IAI47_14830	0.45	-0.2
3,127,479	-		IAI47_14830	0.45	-1.4
3,127,479	-		IAI47_14830	0.45	+0.4
3,127,510	-		IAI47_14830	0.48	+0.1
3,127,657	+		IAI47_14830	0.59	-1.2
3,127,657	+		IAI47_14830	0.59	+1.1
3,127,658	-		IAI47_14830	0.59	-0.3
3,127,658	-		IAI47_14830	0.59	+0.5
3,127,658	-		IAI47_14830	0.59	+1.1
3,127,662	+		IAI47_14830	0.59	-0.4
3,127,663	-		IAI47_14830	0.59	-0.1
3,127,663	-		IAI47_14830	0.59	+1.3
3,127,878	+		IAI47_14830	0.75	+2.2
3,127,879	-		IAI47_14830	0.75	+0.5
3,127,879	-		IAI47_14830	0.75	-0.3
3,127,879	-		IAI47_14830	0.75	-1.0
3,127,879	-		IAI47_14830	0.75	+0.0
3,127,880	+		IAI47_14830	0.75	+0.5
3,127,880	+		IAI47_14830	0.75	-0.4
3,127,880	+		IAI47_14830	0.75	-1.4
3,127,880	+		IAI47_14830	0.75	+0.6
3,127,880	+		IAI47_14830	0.75	+0.5
3,127,880	+		IAI47_14830	0.75	+1.3
3,127,880	+		IAI47_14830	0.75	+0.1
3,127,880	+		IAI47_14830	0.75	+0.9
3,127,880	+		IAI47_14830	0.75	+0.6
3,127,880	+		IAI47_14830	0.75	+1.0
3,127,881	-		IAI47_14830	0.75	+0.2
3,127,881	-		IAI47_14830	0.75	-1.4
3,127,881	-		IAI47_14830	0.75	-0.1
3,127,881	-		IAI47_14830	0.75	+1.3
3,127,881	-		IAI47_14830	0.75	-0.5
3,127,881	-		IAI47_14830	0.75	-0.6
3,127,881	-		IAI47_14830	0.75	+0.8
3,127,881	-		IAI47_14830	0.75	-2.4
3,127,881	-		IAI47_14830	0.75	-0.6
3,127,881	-		IAI47_14830	0.75	-0.3
3,127,881	-		IAI47_14830	0.75	+0.1
3,127,934	+		IAI47_14830	0.79	-1.3
3,127,935	-		IAI47_14830	0.79	-0.0
3,127,935	-		IAI47_14830	0.79	+0.4
3,127,935	-		IAI47_14830	0.79	-0.4
3,127,952	+		IAI47_14830	0.80	+0.2
3,127,952	+		IAI47_14830	0.80	-0.5
3,127,953	-		IAI47_14830	0.80	-0.1
3,127,973	+		IAI47_14830	0.82	+2.1
3,127,973	+		IAI47_14830	0.82	+0.1
3,127,973	+		IAI47_14830	0.82	+1.9
3,127,973	+		IAI47_14830	0.82	-2.3
3,127,973	+		IAI47_14830	0.82	+0.2
3,127,973	+		IAI47_14830	0.82	+0.0
3,127,973	+		IAI47_14830	0.82	+0.1
3,127,973	+		IAI47_14830	0.82	+0.1
3,127,973	+		IAI47_14830	0.82	-0.8
3,127,973	+		IAI47_14830	0.82	+1.4
3,127,973	+		IAI47_14830	0.82	+0.3
3,127,973	+		IAI47_14830	0.82	-0.6
3,127,974	-		IAI47_14830	0.82	+2.5
3,127,974	-		IAI47_14830	0.82	-2.2
3,127,974	-		IAI47_14830	0.82	+2.1
3,127,974	-		IAI47_14830	0.82	+1.1
3,127,974	-		IAI47_14830	0.82	+0.4
3,127,974	-		IAI47_14830	0.82	-0.2
3,127,974	-		IAI47_14830	0.82	-2.0
3,127,985	+		IAI47_14830	0.83	+0.7
3,127,985	+		IAI47_14830	0.83	+1.0
3,127,985	+		IAI47_14830	0.83	-1.2
3,127,985	+		IAI47_14830	0.83	-0.6
3,127,986	-		IAI47_14830	0.83	-1.0
3,127,986	-		IAI47_14830	0.83	-1.2
3,127,986	-		IAI47_14830	0.83	-2.5
3,128,013	+		IAI47_14830	0.85	+1.1
3,128,014	-		IAI47_14830	0.85	+0.8
3,128,014	-		IAI47_14830	0.85	-0.2
3,128,014	-		IAI47_14830	0.85	-0.9
3,128,014	-		IAI47_14830	0.85	-0.1
3,128,014	-		IAI47_14830	0.85	+0.9
3,128,051	+		IAI47_14830	0.88	-0.8
3,128,051	+		IAI47_14830	0.88	-1.6
3,128,051	+		IAI47_14830	0.88	-1.4
3,128,052	-		IAI47_14830	0.88	-0.3
3,128,052	-		IAI47_14830	0.88	+1.1
3,128,052	-		IAI47_14830	0.88	-0.0
3,128,052	-		IAI47_14830	0.88	-0.9
3,128,052	-		IAI47_14830	0.88	+0.6
3,128,052	-		IAI47_14830	0.88	+0.5
3,128,052	-		IAI47_14830	0.88	-0.4
3,128,073	+		IAI47_14830	0.89	-0.2
3,128,073	+		IAI47_14830	0.89	+0.2
3,128,074	-		IAI47_14830	0.89	+0.8
3,128,074	-		IAI47_14830	0.89	+0.9
3,128,074	-		IAI47_14830	0.89	-0.9
3,128,074	-		IAI47_14830	0.89	+1.8
3,128,074	-		IAI47_14830	0.89	-0.4
3,128,074	-		IAI47_14830	0.89	+0.2
3,128,074	-		IAI47_14830	0.89	-0.7
3,128,075	+		IAI47_14830	0.89	-0.6
3,128,075	+		IAI47_14830	0.89	-1.4
3,128,075	+		IAI47_14830	0.89	+1.8
3,128,075	+		IAI47_14830	0.89	-0.3
3,128,075	+		IAI47_14830	0.89	+0.4
3,128,075	+		IAI47_14830	0.89	+0.4
3,128,075	+		IAI47_14830	0.89	-0.7
3,128,075	+		IAI47_14830	0.89	+1.4
3,128,075	+		IAI47_14830	0.89	-0.4
3,128,075	+		IAI47_14830	0.89	-0.6
3,128,076	-		IAI47_14830	0.90	+1.6
3,128,076	-		IAI47_14830	0.90	+1.3
3,128,076	-		IAI47_14830	0.90	-0.2
3,128,076	-		IAI47_14830	0.90	+0.4
3,128,076	-		IAI47_14830	0.90	-0.6
3,128,076	-		IAI47_14830	0.90	-2.3
3,128,076	-		IAI47_14830	0.90	+0.5
3,128,076	-		IAI47_14830	0.90	-0.6
3,128,076	-		IAI47_14830	0.90	+0.2
3,128,076	-		IAI47_14830	0.90	+0.5
3,128,126	+				-0.5
3,128,126	+				-0.7
3,128,127	-				+0.3
3,128,164	-				+0.1
3,128,164	-				+1.5
3,128,217	+				-0.9
3,128,217	+				-1.4
3,128,217	+				+1.0
3,128,218	-				-0.0
3,128,218	-				-0.5
3,128,218	-				+0.7
3,128,227	+				-0.9
3,128,227	+				+0.8
3,128,227	+				-1.5
3,128,228	-				+1.4
3,128,228	-				-0.4
3,128,228	-				-1.6
3,128,290	-				+0.2
3,128,446	+		IAI47_14835	0.12	+2.1
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