Strain Fitness in Pantoea sp. MT58 around IAI47_14745

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,111,445	+				-1.3
3,111,446	-				+0.4
3,111,491	+				+1.3
3,111,491	+				-0.1
3,111,491	+				-0.8
3,111,491	+				+1.2
3,111,491	+				-1.3
3,111,492	-				+0.5
3,111,492	-				+0.3
3,111,492	-				-0.5
3,111,492	-				+1.0
3,111,492	-				-0.4
3,111,492	-				-1.1
3,111,492	-				+0.2
3,111,498	+				+0.4
3,111,498	+				-0.3
3,111,499	-				-0.6
3,111,534	+				+0.2
3,111,534	+				-0.6
3,111,534	+				-1.8
3,111,534	+				+1.5
3,111,534	+				+0.6
3,111,535	-				+0.7
3,111,535	-				-1.7
3,111,535	-				-1.0
3,111,535	-				-0.5
3,111,535	-				+1.0
3,111,549	+				-1.3
3,111,588	+				+0.4
3,111,588	+				+0.6
3,111,588	+				-1.4
3,111,588	+				+1.1
3,111,588	+				-0.2
3,111,588	+				+0.5
3,111,588	+				-1.5
3,111,588	+				-0.2
3,111,588	+				-1.3
3,111,589	-				+0.4
3,111,589	-				+0.9
3,111,589	-				+0.7
3,111,589	-				-0.3
3,111,589	-				-1.1
3,111,595	+				-0.5
3,111,595	+				+0.6
3,111,595	+				-1.5
3,111,595	+				-0.2
3,111,595	+				-0.4
3,111,596	-				+0.6
3,111,656	+		IAI47_14745	0.13	+0.2
3,111,681	+		IAI47_14745	0.16	+0.5
3,111,682	-		IAI47_14745	0.16	-0.2
3,111,682	-		IAI47_14745	0.16	-0.7
3,111,682	-		IAI47_14745	0.16	-0.7
3,111,702	+		IAI47_14745	0.18	+0.5
3,111,703	-		IAI47_14745	0.18	-1.9
3,111,709	+		IAI47_14745	0.18	+0.8
3,111,709	+		IAI47_14745	0.18	-0.5
3,111,709	+		IAI47_14745	0.18	-0.2
3,111,710	-		IAI47_14745	0.19	-1.9
3,111,710	-		IAI47_14745	0.19	-0.2
3,111,710	-		IAI47_14745	0.19	+0.2
3,111,710	-		IAI47_14745	0.19	-2.0
3,111,797	-		IAI47_14745	0.27	-1.3
3,111,797	-		IAI47_14745	0.27	-0.3
3,111,797	-		IAI47_14745	0.27	-0.5
3,111,797	-		IAI47_14745	0.27	-0.1
3,111,810	+		IAI47_14745	0.29	-0.7
3,111,811	-		IAI47_14745	0.29	+1.1
3,111,811	-		IAI47_14745	0.29	-0.9
3,111,811	-		IAI47_14745	0.29	+1.0
3,111,840	+		IAI47_14745	0.32	-0.3
3,111,841	-		IAI47_14745	0.32	+1.0
3,111,886	+		IAI47_14745	0.37	+0.1
3,111,886	+		IAI47_14745	0.37	-0.6
3,111,886	+		IAI47_14745	0.37	+1.5
3,111,886	+		IAI47_14745	0.37	+0.0
3,111,886	+		IAI47_14745	0.37	-2.3
3,111,886	+		IAI47_14745	0.37	-0.3
3,111,887	-		IAI47_14745	0.37	-1.7
3,111,887	-		IAI47_14745	0.37	+0.1
3,111,887	-		IAI47_14745	0.37	+2.7
3,111,919	+		IAI47_14745	0.40	-1.8
3,111,919	+		IAI47_14745	0.40	-0.7
3,111,920	-		IAI47_14745	0.40	+0.1
3,111,920	-		IAI47_14745	0.40	-0.1
3,111,986	-		IAI47_14745	0.47	+1.0
3,112,084	+		IAI47_14745	0.57	+0.3
3,112,085	-		IAI47_14745	0.57	+0.2
3,112,085	-		IAI47_14745	0.57	+1.2
3,112,085	-		IAI47_14745	0.57	+1.0
3,112,232	+		IAI47_14745	0.72	-2.1
3,112,232	+		IAI47_14745	0.72	-1.2
3,112,233	-		IAI47_14745	0.72	-0.7
3,112,233	-		IAI47_14745	0.72	+0.2
3,112,246	+		IAI47_14745	0.74	+0.2
3,112,246	+		IAI47_14745	0.74	+2.3
3,112,246	+		IAI47_14745	0.74	+2.4
3,112,247	-		IAI47_14745	0.74	-1.0
3,112,247	-		IAI47_14745	0.74	+0.0
3,112,247	-		IAI47_14745	0.74	-1.4
3,112,247	-		IAI47_14745	0.74	-1.4
3,112,247	-		IAI47_14745	0.74	-0.6
3,112,247	-		IAI47_14745	0.74	-0.5
3,112,308	+		IAI47_14745	0.80	+0.6
3,112,309	-		IAI47_14745	0.80	+0.0
3,112,309	-		IAI47_14745	0.80	+1.7
3,112,309	-		IAI47_14745	0.80	+0.0
3,112,378	-		IAI47_14745	0.87	+1.3
3,112,452	+				+0.3
3,112,452	+				+0.1
3,112,453	-				-0.3
3,112,471	+				-0.9
3,112,471	+				+1.4
3,112,472	-				-1.5
3,112,472	-				-0.9
3,112,472	-				+1.2
3,112,472	-				-0.0
3,112,490	+				-0.3
3,112,491	-				-0.9
3,112,491	-				-0.3
3,112,538	+				+0.2
3,112,538	+				-1.5
3,112,539	-				+1.5
3,112,539	-				+1.0
3,112,539	-				+0.2
3,112,549	+				+1.8
3,112,549	+				-0.3
3,112,550	-				+2.1
3,112,550	-				-1.2
3,112,550	-				-1.8
3,112,561	+				+0.7
3,112,588	+				+2.1
3,112,589	-				+1.1
3,112,589	-				+0.1
3,112,589	-				+2.5
3,112,619	+		IAI47_14750	0.12	+2.0
3,112,619	+		IAI47_14750	0.12	-0.4
3,112,620	-		IAI47_14750	0.12	-2.2
3,112,620	-		IAI47_14750	0.12	+1.3
3,112,620	-		IAI47_14750	0.12	+0.3
3,112,620	-		IAI47_14750	0.12	+1.9
3,112,620	-		IAI47_14750	0.12	+3.3
3,112,620	-		IAI47_14750	0.12	+0.5
3,112,634	+		IAI47_14750	0.15	+1.4
3,112,634	+		IAI47_14750	0.15	+1.5
3,112,635	-		IAI47_14750	0.15	+1.4
3,112,635	-		IAI47_14750	0.15	+0.2
3,112,694	+		IAI47_14750	0.27	+1.5
3,112,694	+		IAI47_14750	0.27	+0.3
3,112,695	-		IAI47_14750	0.27	+1.3
3,112,695	-		IAI47_14750	0.27	+0.4
3,112,695	-		IAI47_14750	0.27	+0.4
3,112,703	+		IAI47_14750	0.29	+1.8
3,112,704	-		IAI47_14750	0.29	+0.3
3,112,766	+		IAI47_14750	0.42	+1.9
3,112,766	+		IAI47_14750	0.42	+0.8
3,112,767	-		IAI47_14750	0.42	+1.1
3,112,767	-		IAI47_14750	0.42	+2.2
3,112,781	+		IAI47_14750	0.45	+1.5
3,112,799	+		IAI47_14750	0.48	+1.5
3,112,800	-		IAI47_14750	0.48	+1.6
3,112,800	-		IAI47_14750	0.48	-0.6
3,112,800	-		IAI47_14750	0.48	-1.2
3,112,800	-		IAI47_14750	0.48	-2.2
3,112,800	-		IAI47_14750	0.48	+0.8
3,112,800	-		IAI47_14750	0.48	-0.3
3,112,815	+		IAI47_14750	0.52	+0.5
3,112,823	+		IAI47_14750	0.53	+0.5
3,112,849	+		IAI47_14750	0.58	-0.3
3,112,849	+		IAI47_14750	0.58	+1.0
3,112,849	+		IAI47_14750	0.58	+0.3
3,112,865	+		IAI47_14750	0.62	-0.3
3,112,888	+		IAI47_14750	0.66	-0.2
3,112,889	-		IAI47_14750	0.66	+0.4
3,112,949	+		IAI47_14750	0.79	+0.7
3,112,950	-		IAI47_14750	0.79	+0.9
3,112,971	+		IAI47_14750	0.83	-0.3
3,112,972	-		IAI47_14750	0.83	+2.0
3,113,045	+				+1.4
3,113,046	-				+0.3
3,113,046	-				+1.6
3,113,049	+				+0.1
3,113,049	+				-0.1
3,113,049	+				-0.0
3,113,050	-				+0.7