Strain Fitness in Pantoea sp. MT58 around IAI47_06490

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,329,618	+		IAI47_06485	0.84	+0.5
1,329,713	-				+1.9
1,329,713	-				-0.3
1,329,713	-				+1.9
1,329,720	+				-2.2
1,329,721	-				+0.7
1,329,724	+				+1.0
1,329,724	+				-1.0
1,329,732	+				+2.0
1,329,732	+				+0.6
1,329,741	+				+0.3
1,329,750	+				+0.4
1,329,750	+				-0.1
1,329,751	-				-0.4
1,329,768	+				-0.4
1,329,768	+				+0.9
1,329,768	+				+0.5
1,329,768	+				-2.4
1,329,768	+				+0.0
1,329,768	+				+0.4
1,329,768	+				+0.5
1,329,768	+				-0.1
1,329,768	+				+0.8
1,329,768	+				+0.5
1,329,768	+				-0.4
1,329,769	-				+0.1
1,329,769	-				+1.2
1,329,769	-				-0.9
1,329,769	-				+0.1
1,329,798	+				-1.7
1,329,798	+				-0.1
1,329,799	-				-0.5
1,329,799	-				-1.9
1,329,818	+				-1.6
1,329,818	+				+0.8
1,329,818	+				-0.1
1,329,819	-				-0.8
1,329,819	-				-0.4
1,329,833	+				+0.7
1,329,833	+				-1.8
1,329,833	+				+0.3
1,329,833	+				+0.2
1,329,834	-				-0.5
1,329,834	-				-0.5
1,329,896	+				+0.7
1,329,896	+				+1.0
1,329,896	+				+1.0
1,329,896	+				+0.5
1,329,897	-				+0.7
1,329,897	-				+0.4
1,329,897	-				+0.5
1,329,917	+				-0.4
1,329,963	-				-0.9
1,329,963	-				+0.1
1,329,963	-				+0.6
1,329,963	-				+0.4
1,329,963	-				-0.6
1,329,985	+				+1.4
1,329,985	+				+1.8
1,329,985	+				+0.7
1,329,986	-				+0.9
1,329,989	+				+0.4
1,329,989	+				+0.3
1,329,989	+				+0.0
1,329,990	-				-0.4
1,329,990	-				-0.5
1,329,990	-				-0.0
1,329,990	-				-0.3
1,329,990	-				+0.4
1,329,990	-				-0.7
1,329,990	-				+0.4
1,330,053	+				-0.3
1,330,054	-				-1.6
1,330,054	-				+2.0
1,330,106	+				+0.7
1,330,124	-				+0.4
1,330,124	-				+0.4
1,330,124	-				+0.3
1,330,142	+				+0.6
1,330,142	+				-0.2
1,330,142	+				+0.3
1,330,142	+				+0.5
1,330,143	-				+1.2
1,330,160	+				+0.4
1,330,227	+				+1.7
1,330,227	+				-0.3
1,330,227	+				+1.4
1,330,228	-				+0.3
1,330,228	-				+0.4
1,330,228	-				-0.9
1,330,230	+				-0.9
1,330,257	-				-0.1
1,330,312	+				-0.1
1,330,313	-				-2.0
1,330,357	+				+0.5
1,330,357	+				+2.3
1,330,360	+				+0.7
1,330,360	+				+1.0
1,330,360	+				-0.1
1,330,360	+				-0.9
1,330,360	+				-1.2
1,330,360	+				-0.3
1,330,360	+				+0.8
1,330,360	+				+0.6
1,330,360	+				-0.5
1,330,360	+				+0.7
1,330,360	+				-1.3
1,330,361	-				-1.2
1,330,361	-				-0.0
1,330,361	-				-0.3
1,330,361	-				-1.6
1,330,361	-				-0.9
1,330,361	-				-1.2
1,330,361	-				+0.8
1,330,361	-				-0.5
1,330,361	-				-1.2
1,330,361	-				+0.2
1,330,361	-				-2.1
1,330,361	-				-0.3
1,330,364	-				+0.9
1,330,382	+				+0.5
1,330,382	+				+2.0
1,330,382	+				-2.7
1,330,382	+				-0.5
1,330,382	+				+1.2
1,330,382	+				+0.8
1,330,382	+				-0.4
1,330,383	-				-0.3
1,330,383	-				-0.6
1,330,383	-				-3.2
1,330,383	-				+0.1
1,330,383	-				-1.0
1,330,383	-				-0.3
1,330,383	-				-1.7
1,330,383	-				-1.0
1,330,383	-				+0.5
1,330,391	+				-0.1
1,330,391	+				-1.4
1,330,392	-				-2.1
1,330,392	-				+1.1
1,330,392	-				-0.1
1,330,392	-				-1.3
1,330,433	+				+1.3
1,330,433	+				+1.3
1,330,434	-				-1.0
1,330,514	+				-0.3
1,330,515	-				-2.0
1,330,515	-				-0.1
1,330,516	+				-1.5
1,330,516	+				-0.1
1,330,517	-				+0.8
1,330,519	+				+0.1
1,330,520	-				+0.3
1,330,520	-				+0.9
1,330,520	-				-1.5
1,330,520	-				-1.5
1,330,523	+				+0.1
1,330,534	-				-0.7
1,330,534	-				-1.7
1,330,544	+				+1.2
1,330,545	+				-0.7
1,330,545	+				+0.2
1,330,545	+				+0.7
1,330,545	+				-1.3
1,330,546	-				-0.5
1,330,573	+				-1.0
1,330,573	+				-1.1
1,330,573	+				+0.9
1,330,573	+				-0.1
1,330,573	+				-0.0
1,330,573	+				-1.3
1,330,573	+				-1.1
1,330,574	-				-0.1
1,330,574	-				+2.5
1,330,574	-				-0.6
1,330,574	-				+0.7
1,330,577	+				+0.9
1,330,577	+				-0.4
1,330,577	+				-0.7
1,330,578	-				-0.8
1,330,578	-				-2.1
1,330,578	-				-0.9
1,330,578	-				-0.4
1,330,578	-				-0.2
1,330,578	-				-1.7
1,330,598	+				+0.4
1,330,640	+				-0.0
1,330,663	+				-0.5
1,330,663	+				+1.3
1,330,663	+				-0.1
1,330,663	+				-0.3
1,330,663	+				+0.3
1,330,663	+				+0.0
1,330,663	+				-2.2
1,330,663	+				+1.5
1,330,663	+				-0.5
1,330,663	+				-0.4
1,330,663	+				-2.1
1,330,664	-				-1.2
1,330,664	-				+0.3
1,330,664	-				-0.7
1,330,664	-				-0.8
1,330,664	-				-1.7
1,330,664	-				-0.4
1,330,664	-				-1.4
1,330,664	-				-1.0
1,330,664	-				-0.9
1,330,667	+				-0.2
1,330,667	+				-1.7
1,330,667	+				-1.3
1,330,667	+				-1.1
1,330,667	+				-2.3
1,330,668	-				-2.3
1,330,668	-				-1.3
1,330,668	-				-2.3
1,330,750	+				+3.0
1,330,750	+				-1.4
1,330,750	+				-0.7
1,330,750	+				-1.4
1,330,750	+				+0.0
1,330,750	+				-1.9
1,330,750	+				-1.4
1,330,751	-				-0.7
1,330,751	-				-2.0
1,330,751	-				-1.0
1,330,751	-				-1.8
1,330,751	-				-0.5
1,330,751	-				-0.1
1,330,751	-				+0.2
1,330,755	+				+1.0
1,330,756	-				+1.5
1,330,896	+				-0.2
1,330,896	+				+1.3
1,330,896	+				+0.7
1,330,896	+				-0.2
1,330,897	-				-1.4
1,330,897	-				-0.6
1,330,897	-				+0.4
1,330,897	-				+0.3
1,330,897	-				-2.4
1,330,897	-				-0.9
1,330,915	+				+0.4
1,330,915	+				+0.3
1,330,915	+				+0.4
1,330,915	+				-1.9
1,330,915	+				+0.9
1,330,916	-				-1.9
1,330,946	+				-1.7
1,330,946	+				-1.3
1,330,946	+				-1.9
1,330,946	+				+1.1
1,330,946	+				-0.3
1,331,042	+				-2.2
1,331,219	+				-2.4
1,331,220	-				-1.4
1,331,220	-				+2.0
1,331,238	+				+0.7
1,331,238	+				+1.4
1,331,238	+				-0.2
1,331,238	+				-1.6
1,331,238	+				+0.6
1,331,238	+				-1.6
1,331,238	+				-1.1
1,331,238	+				+0.9
1,331,238	+				-1.5
1,331,238	+				+1.9
1,331,239	-				+1.3
1,331,239	-				-1.1
1,331,239	-				-0.3
1,331,239	-				+1.4
1,331,239	-				+0.3
1,331,239	-				-0.0
1,331,239	-				-0.3
1,331,276	+				+1.4
1,331,342	+				+1.1
1,331,342	+				+0.8
1,331,343	-				-0.6
1,331,463	-				-0.5
1,331,507	+				-1.0
1,331,556	+				-1.6
1,331,557	-				-1.5
1,331,557	-				+0.9
1,331,564	+				-0.1
1,331,564	+				+1.5
1,331,564	+				-0.2
1,331,564	+				-0.8
1,331,591	+				-1.6
1,331,591	+				-1.3
1,331,591	+				-0.8
1,331,591	+				+0.7
1,331,592	-				+0.4
1,331,592	-				-0.4
1,331,592	-				-0.7
1,331,592	-				-1.1
1,331,594	+				-0.6
1,331,594	+				+0.8
1,331,594	+				+0.1
1,331,594	+				+0.3
1,331,594	+				-1.3
1,331,595	-				+0.0
1,331,595	-				-1.7
1,331,661	-				+1.3
1,331,661	-				-0.4
1,331,700	-				-2.1
1,331,976	-				+0.8
1,332,023	+				-2.0
1,332,024	-				-2.4
1,332,183	+				-0.2
1,332,183	+				-0.2
1,332,183	+				+0.2
1,332,184	-				-0.3
1,332,196	+				+0.1
1,332,196	+				-1.0
1,332,196	+				-1.0
1,332,196	+				+0.1
1,332,196	+				-1.1
1,332,196	+				+0.2
1,332,197	-				-0.6
1,332,197	-				+2.9
1,332,197	-				-0.2
1,332,197	-				-0.1
1,332,197	-				+0.5
1,332,197	-				+0.3
1,332,197	-				+0.1
1,332,300	-				-1.4
1,332,368	+		IAI47_06490	0.10	+1.0
1,332,498	+		IAI47_06490	0.11	-0.2
1,332,498	+		IAI47_06490	0.11	+0.3
1,332,498	+		IAI47_06490	0.11	-2.3
1,332,498	+		IAI47_06490	0.11	-0.8
1,332,498	+		IAI47_06490	0.11	+0.8
1,332,498	+		IAI47_06490	0.11	-0.6
1,332,499	-		IAI47_06490	0.11	+0.2
1,332,499	-		IAI47_06490	0.11	-2.1
1,332,499	-		IAI47_06490	0.11	-2.9
1,332,499	-		IAI47_06490	0.11	+1.7
1,332,638	+		IAI47_06490	0.12	-0.0
1,332,813	+		IAI47_06490	0.13	-0.4
1,332,813	+		IAI47_06490	0.13	-0.2
1,332,813	+		IAI47_06490	0.13	-1.6
1,332,814	-		IAI47_06490	0.13	-1.5
1,332,814	-		IAI47_06490	0.13	+0.5
1,332,897	-		IAI47_06490	0.13	-0.9
1,332,998	-		IAI47_06490	0.14	-0.5
1,333,026	-		IAI47_06490	0.14	+0.2
1,333,026	-		IAI47_06490	0.14	-2.3
1,333,082	+		IAI47_06490	0.14	-2.2
1,333,106	+		IAI47_06490	0.14	-1.5
1,333,106	+		IAI47_06490	0.14	-0.5
1,333,106	+		IAI47_06490	0.14	+0.2
1,333,106	+		IAI47_06490	0.14	-0.5
1,333,107	-		IAI47_06490	0.14	-1.6
1,333,130	+		IAI47_06490	0.15	-2.3
1,333,206	-		IAI47_06490	0.15	-1.7
1,333,223	+		IAI47_06490	0.15	-0.4
1,333,223	+		IAI47_06490	0.15	-2.0
1,333,223	+		IAI47_06490	0.15	-1.5
1,333,223	+		IAI47_06490	0.15	-0.3
1,333,224	-		IAI47_06490	0.15	-0.7
1,333,224	-		IAI47_06490	0.15	-1.0
1,333,224	-		IAI47_06490	0.15	+1.0
1,333,224	-		IAI47_06490	0.15	-0.4
1,333,424	-		IAI47_06490	0.16	+0.5
1,333,424	-		IAI47_06490	0.16	-2.3
1,333,443	+		IAI47_06490	0.16	+0.4
1,333,443	+		IAI47_06490	0.16	-1.0
1,333,443	+		IAI47_06490	0.16	+0.3
1,333,443	+		IAI47_06490	0.16	-0.4
1,333,443	+		IAI47_06490	0.16	-1.0
1,333,444	-		IAI47_06490	0.16	-1.7
1,333,444	-		IAI47_06490	0.16	-0.3
1,333,706	+		IAI47_06490	0.18	+0.0
1,333,706	+		IAI47_06490	0.18	-2.8
1,333,706	+		IAI47_06490	0.18	+0.0
1,333,707	-		IAI47_06490	0.18	-1.2
1,333,707	-		IAI47_06490	0.18	-0.2
1,333,707	-		IAI47_06490	0.18	+0.1
1,333,707	-		IAI47_06490	0.18	+0.0
1,333,707	-		IAI47_06490	0.18	-0.8
1,333,707	-		IAI47_06490	0.18	-1.2
1,333,758	+		IAI47_06490	0.18	+0.4
1,333,758	+		IAI47_06490	0.18	+0.2
1,333,758	+		IAI47_06490	0.18	-1.1
1,333,758	+		IAI47_06490	0.18	+0.2
1,333,758	+		IAI47_06490	0.18	+2.0
1,333,758	+		IAI47_06490	0.18	-1.2
1,333,759	-		IAI47_06490	0.18	-0.0
1,333,759	-		IAI47_06490	0.18	-0.3
1,333,844	+		IAI47_06490	0.19	-0.8
1,333,845	-		IAI47_06490	0.19	+0.6
1,333,876	+		IAI47_06490	0.19	-1.0
1,333,876	+		IAI47_06490	0.19	+0.8
1,333,910	+		IAI47_06490	0.19	+1.3
1,333,944	-		IAI47_06490	0.19	+2.6
1,333,944	-		IAI47_06490	0.19	-0.8
1,333,944	-		IAI47_06490	0.19	-1.9
1,333,976	+		IAI47_06490	0.19	-0.8
1,334,070	+		IAI47_06490	0.20	-1.1
1,334,070	+		IAI47_06490	0.20	+0.1
1,334,070	+		IAI47_06490	0.20	-0.8
1,334,105	+		IAI47_06490	0.20	-0.8
1,334,105	+		IAI47_06490	0.20	-2.0
1,334,106	-		IAI47_06490	0.20	+1.2
1,334,213	+		IAI47_06490	0.21	-0.7
1,334,339	+		IAI47_06490	0.21	-0.9
1,334,340	-		IAI47_06490	0.21	-1.7
1,334,340	-		IAI47_06490	0.21	-0.1
1,334,363	+		IAI47_06490	0.22	-0.2
1,334,363	+		IAI47_06490	0.22	+0.4
1,334,378	+		IAI47_06490	0.22	-0.5
1,334,379	-		IAI47_06490	0.22	-0.4
1,334,383	-		IAI47_06490	0.22	-2.2
1,334,383	-		IAI47_06490	0.22	-0.3
1,334,383	-		IAI47_06490	0.22	-1.1
1,334,383	-		IAI47_06490	0.22	-0.8
1,334,447	+		IAI47_06490	0.22	+0.8
1,334,447	+		IAI47_06490	0.22	-1.5
1,334,498	+		IAI47_06490	0.22	+0.3
1,334,498	+		IAI47_06490	0.22	-1.0
1,334,498	+		IAI47_06490	0.22	-0.0
1,334,498	+		IAI47_06490	0.22	+0.5
1,334,499	-		IAI47_06490	0.22	-0.0
1,334,499	-		IAI47_06490	0.22	-0.4
1,334,499	-		IAI47_06490	0.22	-1.1
1,334,585	+		IAI47_06490	0.23	-1.3
1,334,585	+		IAI47_06490	0.23	-0.0
1,334,586	-		IAI47_06490	0.23	-1.2
1,334,676	-		IAI47_06490	0.23	-0.9
1,334,676	-		IAI47_06490	0.23	+0.2
1,334,688	+		IAI47_06490	0.23	-1.0
1,334,688	+		IAI47_06490	0.23	-0.0
1,334,689	-		IAI47_06490	0.23	-0.1
1,334,769	-		IAI47_06490	0.24	-1.4
1,334,985	+		IAI47_06490	0.25	-1.8
1,334,985	+		IAI47_06490	0.25	-2.5
1,334,985	+		IAI47_06490	0.25	-0.2
1,334,986	-		IAI47_06490	0.25	-1.4
1,334,986	-		IAI47_06490	0.25	+0.0
1,334,986	-		IAI47_06490	0.25	-1.1
1,335,069	+		IAI47_06490	0.26	-0.6
1,335,069	+		IAI47_06490	0.26	-0.0
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