Strain Fitness in Pantoea sp. MT58 around IAI47_19460

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
119,989	+				+0.4
119,989	+				+1.2
120,008	+				-0.8
120,012	+				-0.5
120,012	+				-1.9
120,012	+				+2.0
120,013	-				+0.9
120,184	+		IAI47_19455	0.23	+1.3
120,184	+		IAI47_19455	0.23	+0.2
120,185	-		IAI47_19455	0.23	-1.5
120,236	+		IAI47_19455	0.29	+1.7
120,236	+		IAI47_19455	0.29	-0.8
120,236	+		IAI47_19455	0.29	-2.2
120,237	-		IAI47_19455	0.29	-1.1
120,261	-		IAI47_19455	0.32	+2.3
120,294	-		IAI47_19455	0.36	+0.3
120,345	+		IAI47_19455	0.42	+1.3
120,345	+		IAI47_19455	0.42	-0.6
120,345	+		IAI47_19455	0.42	+1.8
120,345	+		IAI47_19455	0.42	-0.5
120,345	+		IAI47_19455	0.42	+3.1
120,346	-		IAI47_19455	0.42	+1.6
120,346	-		IAI47_19455	0.42	+1.1
120,346	-		IAI47_19455	0.42	+3.1
120,346	-		IAI47_19455	0.42	+1.6
120,346	-		IAI47_19455	0.42	-0.7
120,349	+		IAI47_19455	0.42	-0.9
120,349	+		IAI47_19455	0.42	-1.1
120,358	+		IAI47_19455	0.43	+0.5
120,358	+		IAI47_19455	0.43	-1.9
120,359	-		IAI47_19455	0.44	+1.5
120,359	-		IAI47_19455	0.44	-1.1
120,359	-		IAI47_19455	0.44	-0.4
120,401	+		IAI47_19455	0.48	-0.9
120,402	-		IAI47_19455	0.49	+0.1
120,476	-		IAI47_19455	0.57	-1.4
120,506	+		IAI47_19455	0.61	+0.4
120,506	+		IAI47_19455	0.61	-1.1
120,506	+		IAI47_19455	0.61	-1.3
120,507	-		IAI47_19455	0.61	+0.2
120,507	-		IAI47_19455	0.61	-1.1
120,557	+		IAI47_19455	0.67	+1.2
120,557	+		IAI47_19455	0.67	-1.7
120,626	+		IAI47_19455	0.75	+0.2
120,626	+		IAI47_19455	0.75	-1.0
120,639	-		IAI47_19455	0.76	+3.0
120,639	-		IAI47_19455	0.76	+0.2
120,758	+				-1.4
120,758	+				-1.8
120,759	-				+1.2
120,760	+				-0.0
120,761	-				-0.6
120,811	-				+2.6
120,822	+				+0.3
120,822	+				-1.0
120,856	+				-0.2
120,856	+				-0.3
120,856	+				-1.7
120,856	+				+0.2
120,857	-				+3.6
120,908	+				-1.1
120,909	-				-1.8
120,913	+				-0.1
120,914	-				+0.2
120,914	-				-0.1
120,914	-				+0.2
121,036	+				+1.6
121,091	+		IAI47_19460	0.12	-2.0
121,331	+		IAI47_19460	0.38	-3.3
121,360	+		IAI47_19460	0.42	+0.6
121,361	-		IAI47_19460	0.42	+0.4
121,361	-		IAI47_19460	0.42	+0.6
121,363	+		IAI47_19460	0.42	+1.2
121,363	+		IAI47_19460	0.42	-0.2
121,363	+		IAI47_19460	0.42	+1.7
121,363	+		IAI47_19460	0.42	+0.3
121,364	-		IAI47_19460	0.42	+1.1
121,364	-		IAI47_19460	0.42	+0.2
121,394	-		IAI47_19460	0.45	+0.5
121,394	-		IAI47_19460	0.45	+0.0
121,411	+		IAI47_19460	0.47	-0.3
121,411	+		IAI47_19460	0.47	-0.8
121,411	+		IAI47_19460	0.47	-0.8
121,412	-		IAI47_19460	0.47	+0.3
121,412	-		IAI47_19460	0.47	+1.8
121,414	+		IAI47_19460	0.48	-0.7
121,415	-		IAI47_19460	0.48	+2.1
121,541	-		IAI47_19460	0.62	-0.4
121,541	-		IAI47_19460	0.62	+1.1
121,541	-		IAI47_19460	0.62	+1.6
121,541	-		IAI47_19460	0.62	+0.5
121,541	-		IAI47_19460	0.62	+1.2
121,541	-		IAI47_19460	0.62	+3.4
121,541	-		IAI47_19460	0.62	+0.3
121,551	-		IAI47_19460	0.63	+2.3
121,551	-		IAI47_19460	0.63	-2.4
121,553	+		IAI47_19460	0.63	+2.8
121,553	+		IAI47_19460	0.63	+1.7
121,554	-		IAI47_19460	0.63	-1.5
121,650	+		IAI47_19460	0.74	+0.5
121,650	+		IAI47_19460	0.74	+0.5
121,687	-		IAI47_19460	0.78	+0.9
121,696	-		IAI47_19460	0.79	-0.8
121,696	-		IAI47_19460	0.79	-1.1
121,732	+		IAI47_19460	0.83	-0.6
121,747	-		IAI47_19460	0.85	-0.7
121,747	-		IAI47_19460	0.85	-1.3
121,757	+		IAI47_19460	0.86	+0.3
121,757	+		IAI47_19460	0.86	-1.3
121,757	+		IAI47_19460	0.86	+0.4
121,790	+		IAI47_19460	0.90	-1.4
121,790	+		IAI47_19460	0.90	+1.2
121,790	+		IAI47_19460	0.90	+1.6
121,790	+		IAI47_19460	0.90	+0.1
121,790	+		IAI47_19460	0.90	+1.8
121,790	+		IAI47_19460	0.90	-0.1
121,790	+		IAI47_19460	0.90	+2.3
121,790	+		IAI47_19460	0.90	+0.5
121,790	+		IAI47_19460	0.90	+1.9
121,790	+		IAI47_19460	0.90	+0.3
121,791	-		IAI47_19460	0.90	-2.4
121,791	-		IAI47_19460	0.90	-1.8
121,791	-		IAI47_19460	0.90	-2.5
121,791	-		IAI47_19460	0.90	-1.5
121,791	-		IAI47_19460	0.90	+1.5
121,791	-		IAI47_19460	0.90	-0.3
121,791	-		IAI47_19460	0.90	-2.6
121,791	-		IAI47_19460	0.90	+0.3
121,853	-				+0.8
121,853	-				+0.6
121,853	-				+1.1
121,881	-				+0.3
121,881	-				+0.7
121,903	+				-0.7
121,913	-				-1.3
121,913	-				-1.3
121,913	-				-1.2
121,921	+				+0.9
121,921	+				-0.5
121,921	+				+1.4
121,921	+				+1.5
121,921	+				+0.1
121,921	+				-1.7
121,921	+				+1.1
121,921	+				+1.2
121,921	+				-1.8
121,921	+				-0.1
121,921	+				+0.1
121,921	+				+0.0
121,921	+				-3.2
121,922	-				-0.9
121,922	-				-1.8
121,922	-				-1.5
121,922	-				-0.8
121,922	-				+1.7
121,922	-				-1.6
121,922	-				-1.1
121,922	-				-0.8
121,925	+				-1.1
121,925	+				+1.6
121,925	+				+1.8
121,925	+				+4.3
121,926	-				+3.1
121,926	-				-2.4
121,985	+		IAI47_19465	0.19	+1.1
121,986	-		IAI47_19465	0.20	+0.9
121,986	-		IAI47_19465	0.20	+0.6
121,986	-		IAI47_19465	0.20	+3.0
122,010	+		IAI47_19465	0.25	+1.4
122,010	+		IAI47_19465	0.25	-0.5
122,010	+		IAI47_19465	0.25	-0.5
122,011	-		IAI47_19465	0.25	+0.6
122,042	+		IAI47_19465	0.33	-2.6
122,042	+		IAI47_19465	0.33	-1.4
122,043	-		IAI47_19465	0.33	-0.1
122,043	-		IAI47_19465	0.33	-1.3
122,048	-		IAI47_19465	0.34	+2.6
122,051	+		IAI47_19465	0.35	+2.2
122,137	+		IAI47_19465	0.55	-0.6
122,137	+		IAI47_19465	0.55	-0.9
122,138	-		IAI47_19465	0.56	-2.4
122,138	-		IAI47_19465	0.56	+0.7
122,172	+		IAI47_19465	0.64	+0.1
122,172	+		IAI47_19465	0.64	+1.5
122,172	+		IAI47_19465	0.64	-0.9
122,172	+		IAI47_19465	0.64	-1.1
122,172	+		IAI47_19465	0.64	+1.4
122,231	+		IAI47_19465	0.78	-1.1
122,231	+		IAI47_19465	0.78	+0.0
122,231	+		IAI47_19465	0.78	-0.1
122,231	+		IAI47_19465	0.78	+2.5
122,231	+		IAI47_19465	0.78	+1.7
122,231	+		IAI47_19465	0.78	-3.0
122,231	+		IAI47_19465	0.78	-0.2
122,232	-		IAI47_19465	0.78	-1.3
122,232	-		IAI47_19465	0.78	-1.8
122,232	-		IAI47_19465	0.78	-1.1
122,291	+				-1.2
122,312	+				-0.1
122,312	+				-0.7
122,313	-				-1.8
122,313	-				-0.7
122,322	-				-2.7
122,322	-				+1.2
122,345	+				+1.2
122,347	+				-3.1
122,347	+				+0.8
122,347	+				+0.0
122,348	-				-0.3
122,348	-				+1.7
122,392	+				-1.1
122,399	+				+1.3
122,399	+				-2.2
122,400	-				-1.8
122,406	+				-0.8
122,416	+				-1.5
122,416	+				-0.6
122,417	-				-0.3
122,417	-				+2.5
122,417	-				+2.0
122,417	-				+0.8
122,417	-				-2.0
122,442	-				-0.3
122,446	+				-1.0
122,447	-				+0.3
122,474	+				-0.7
122,564	+		IAI47_19470	0.11	-1.4
122,565	-		IAI47_19470	0.11	-0.6
122,565	-		IAI47_19470	0.11	-2.3
122,565	-		IAI47_19470	0.11	-0.4
122,565	-		IAI47_19470	0.11	-1.1
122,567	+		IAI47_19470	0.11	+1.5
122,567	+		IAI47_19470	0.11	-1.1
122,568	-		IAI47_19470	0.11	+2.0
122,568	-		IAI47_19470	0.11	+1.6
122,568	-		IAI47_19470	0.11	-0.8
122,594	+		IAI47_19470	0.13	-2.5
122,594	+		IAI47_19470	0.13	+1.7
122,594	+		IAI47_19470	0.13	+2.3
122,619	+		IAI47_19470	0.14	+0.3
122,620	-		IAI47_19470	0.14	-1.0
122,632	+		IAI47_19470	0.15	-1.2
122,633	-		IAI47_19470	0.15	-2.1
122,701	+		IAI47_19470	0.20	-2.1
122,701	+		IAI47_19470	0.20	+0.5
122,802	-		IAI47_19470	0.27	+0.8
122,812	-		IAI47_19470	0.28	-0.3
122,812	-		IAI47_19470	0.28	-1.0
122,871	-		IAI47_19470	0.32	+0.9