Strain Fitness in Pantoea sp. MT58 around IAI47_18660

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,979,882	-				-1.6
3,979,882	-				-0.2
3,979,882	-				+1.6
3,979,882	-				-1.5
3,979,882	-				-1.4
3,979,882	-				-0.1
3,979,882	-				-1.6
3,980,091	+				-0.5
3,980,091	+				+0.5
3,980,092	-				-1.8
3,980,121	-				-1.0
3,980,121	-				-0.6
3,980,121	-				-3.0
3,980,121	-				-2.2
3,980,121	-				-0.0
3,980,121	-				-0.5
3,980,121	-				+1.1
3,980,121	-				-1.4
3,980,121	-				-0.9
3,980,121	-				-0.9
3,980,121	-				-0.2
3,980,121	-				-0.6
3,980,121	-				-2.8
3,980,121	-				+2.1
3,980,121	-				+1.4
3,980,121	-				-0.7
3,980,121	-				-1.4
3,980,121	-				-1.5
3,980,121	-				-0.9
3,980,121	-				-1.9
3,980,121	-				-0.6
3,980,121	-				-0.6
3,980,121	-				+0.2
3,980,121	-				-1.2
3,980,121	-				+0.2
3,980,121	-				+0.9
3,980,121	-				+1.1
3,980,125	-				-1.6
3,980,125	-				+1.4
3,980,125	-				-1.3
3,980,327	-				+0.2
3,980,327	-				+2.2
3,980,327	-				-3.3
3,980,327	-				-1.7
3,980,536	-				-0.5
3,980,569	+				+1.0
3,980,570	-				-0.8
3,980,636	+				-1.3
3,980,636	+				+2.4
3,980,637	-				+0.7
3,980,637	-				+1.9
3,980,640	+				+0.8
3,980,640	+				+1.3
3,980,640	+				+0.5
3,980,640	+				-0.9
3,980,641	-				+2.2
3,980,641	-				+0.3
3,980,641	-				+1.0
3,980,641	-				+0.1
3,980,641	-				+2.4
3,980,641	-				-1.4
3,980,660	+				+0.5
3,980,660	+				+1.8
3,980,660	+				+1.7
3,980,661	-				-2.1
3,980,661	-				-1.1
3,980,661	-				-1.9
3,980,661	-				+2.3
3,980,661	-				+1.9
3,980,661	-				+2.2
3,980,716	+				+2.1
3,980,717	-				-0.1
3,980,762	-				+1.8
3,980,802	-				-0.4
3,980,898	+				-1.5
3,980,898	+				-0.4
3,980,898	+				+0.5
3,980,898	+				+1.3
3,980,899	-				-1.0
3,980,899	-				-0.8
3,980,899	-				+0.6
3,980,978	+				-1.9
3,980,978	+				-1.6
3,980,978	+				-0.2
3,980,978	+				-1.4
3,980,978	+				-3.5
3,980,979	-				-1.0
3,980,979	-				+1.3
3,980,979	-				-0.6
3,981,007	+				+0.4
3,981,007	+				+1.9
3,981,007	+				-1.6
3,981,008	-				+0.8
3,981,008	-				-1.3
3,981,010	+				-0.1
3,981,010	+				+0.8
3,981,010	+				+3.2
3,981,010	+				-0.1
3,981,010	+				-0.8
3,981,010	+				+0.4
3,981,011	-				-0.5
3,981,011	-				-0.6
3,981,011	-				-1.4
3,981,020	+				+1.2
3,981,065	+				+0.7
3,981,066	-				-1.2
3,981,066	-				-1.7
3,981,066	-				+0.7
3,981,068	+				+0.7
3,981,069	-				-1.6
3,981,069	-				-1.8
3,981,069	-				+0.2
3,981,069	-				-0.3
3,981,086	+				+0.6
3,981,086	+				+0.4
3,981,086	+				-1.1
3,981,086	+				-0.5
3,981,087	-				-0.7
3,981,087	-				-0.5
3,981,087	-				+0.1
3,981,087	-				-1.3
3,981,087	-				+0.6
3,981,087	-				-1.6
3,981,087	-				-2.4
3,981,087	-				-0.8
3,981,087	-				+0.2
3,981,088	+				+0.1
3,981,088	+				-3.2
3,981,088	+				-1.4
3,981,203	-		IAI47_18665	0.11	+0.9
3,981,203	-		IAI47_18665	0.11	-0.5
3,981,203	-		IAI47_18665	0.11	-2.2
3,981,203	-		IAI47_18665	0.11	+1.3
3,981,206	+		IAI47_18665	0.12	-0.3
3,981,207	-		IAI47_18665	0.12	+0.3
3,981,207	-		IAI47_18665	0.12	-2.4
3,981,207	-		IAI47_18665	0.12	+0.5
3,981,284	+		IAI47_18665	0.16	+1.3
3,981,284	+		IAI47_18665	0.16	+0.2
3,981,285	-		IAI47_18665	0.16	-2.7
3,981,285	-		IAI47_18665	0.16	-1.8
3,981,285	-		IAI47_18665	0.16	+0.2
3,981,319	+		IAI47_18665	0.18	-1.7
3,981,319	+		IAI47_18665	0.18	-1.0
3,981,319	+		IAI47_18665	0.18	-1.4
3,981,319	+		IAI47_18665	0.18	-0.1
3,981,319	+		IAI47_18665	0.18	-2.0
3,981,320	-		IAI47_18665	0.18	-2.2
3,981,320	-		IAI47_18665	0.18	-0.8
3,981,339	-		IAI47_18665	0.20	-0.3
3,981,339	-		IAI47_18665	0.20	-1.2
3,981,339	-		IAI47_18665	0.20	-0.8
3,981,339	-		IAI47_18665	0.20	+0.1
3,981,371	+		IAI47_18665	0.21	+0.8
3,981,371	+		IAI47_18665	0.21	-1.5
3,981,371	+		IAI47_18665	0.21	+0.7
3,981,371	+		IAI47_18665	0.21	-2.2
3,981,371	+		IAI47_18665	0.21	+1.2
3,981,371	+		IAI47_18665	0.21	-2.7
3,981,371	+		IAI47_18665	0.21	-0.8
3,981,371	+		IAI47_18665	0.21	+2.0
3,981,371	+		IAI47_18665	0.21	-0.4
3,981,371	+		IAI47_18665	0.21	-0.9
3,981,371	+		IAI47_18665	0.21	-0.3
3,981,371	+		IAI47_18665	0.21	-0.3
3,981,371	+		IAI47_18665	0.21	+1.9
3,981,372	-		IAI47_18665	0.21	-2.0
3,981,372	-		IAI47_18665	0.21	+0.0
3,981,372	-		IAI47_18665	0.21	+0.3
3,981,372	-		IAI47_18665	0.21	+1.5
3,981,372	-		IAI47_18665	0.21	+2.0
3,981,372	-		IAI47_18665	0.21	+1.0
3,981,372	-		IAI47_18665	0.21	-0.4
3,981,372	-		IAI47_18665	0.21	+0.8
3,981,372	-		IAI47_18665	0.21	-2.9
3,981,372	-		IAI47_18665	0.21	+4.3
3,981,372	-		IAI47_18665	0.21	-0.9
3,981,374	+		IAI47_18665	0.22	+0.1
3,981,374	+		IAI47_18665	0.22	-1.4
3,981,374	+		IAI47_18665	0.22	+0.1
3,981,374	+		IAI47_18665	0.22	-0.1
3,981,374	+		IAI47_18665	0.22	+2.5
3,981,374	+		IAI47_18665	0.22	+1.7
3,981,375	-		IAI47_18665	0.22	+0.6
3,981,375	-		IAI47_18665	0.22	+2.7
3,981,375	-		IAI47_18665	0.22	-1.6
3,981,375	-		IAI47_18665	0.22	-2.7
3,981,375	-		IAI47_18665	0.22	-2.3
3,981,382	+		IAI47_18665	0.22	+0.6
3,981,382	+		IAI47_18665	0.22	-0.7
3,981,382	+		IAI47_18665	0.22	-2.2
3,981,382	+		IAI47_18665	0.22	+1.0
3,981,382	+		IAI47_18665	0.22	+0.3
3,981,383	-		IAI47_18665	0.22	-1.0
3,981,383	-		IAI47_18665	0.22	-1.5
3,981,383	-		IAI47_18665	0.22	-1.6
3,981,383	-		IAI47_18665	0.22	+0.3
3,981,401	-		IAI47_18665	0.23	-0.8
3,981,401	-		IAI47_18665	0.23	+0.3
3,981,446	+		IAI47_18665	0.26	-0.9
3,981,446	+		IAI47_18665	0.26	-0.8
3,981,446	+		IAI47_18665	0.26	+1.0
3,981,447	-		IAI47_18665	0.26	-1.4
3,981,447	-		IAI47_18665	0.26	+0.6
3,981,447	-		IAI47_18665	0.26	-1.4
3,981,447	-		IAI47_18665	0.26	-1.3
3,981,461	-		IAI47_18665	0.27	+2.3
3,981,461	-		IAI47_18665	0.27	-1.9
3,981,461	-		IAI47_18665	0.27	+2.0
3,981,493	+		IAI47_18665	0.29	-1.9
3,981,493	+		IAI47_18665	0.29	-1.6
3,981,493	+		IAI47_18665	0.29	-1.4
3,981,493	+		IAI47_18665	0.29	-1.7
3,981,493	+		IAI47_18665	0.29	-2.5
3,981,494	-		IAI47_18665	0.29	+0.5
3,981,494	-		IAI47_18665	0.29	+0.6
3,981,494	-		IAI47_18665	0.29	-2.1
3,981,494	-		IAI47_18665	0.29	+0.5
3,981,494	-		IAI47_18665	0.29	-1.6
3,981,494	-		IAI47_18665	0.29	-3.0
3,981,499	+		IAI47_18665	0.29	-0.5
3,981,499	+		IAI47_18665	0.29	-1.6
3,981,500	-		IAI47_18665	0.29	+0.1
3,981,500	-		IAI47_18665	0.29	-2.9
3,981,500	-		IAI47_18665	0.29	-2.1
3,981,500	-		IAI47_18665	0.29	-1.0
3,981,500	-		IAI47_18665	0.29	-2.4
3,981,500	-		IAI47_18665	0.29	-0.5
3,981,500	-		IAI47_18665	0.29	+0.7
3,981,512	+		IAI47_18665	0.30	-0.5
3,981,512	+		IAI47_18665	0.30	-1.7
3,981,513	-		IAI47_18665	0.30	-0.1
3,981,536	+		IAI47_18665	0.31	+0.2
3,981,536	+		IAI47_18665	0.31	-0.1
3,981,536	+		IAI47_18665	0.31	-0.9
3,981,536	+		IAI47_18665	0.31	-0.5
3,981,536	+		IAI47_18665	0.31	-0.7
3,981,536	+		IAI47_18665	0.31	-1.2
3,981,537	-		IAI47_18665	0.31	+2.0
3,981,537	-		IAI47_18665	0.31	-1.2
3,981,537	-		IAI47_18665	0.31	+0.3
3,981,537	-		IAI47_18665	0.31	-0.5
3,981,537	-		IAI47_18665	0.31	-1.7
3,981,611	+		IAI47_18665	0.36	+2.0
3,981,611	+		IAI47_18665	0.36	-0.3
3,981,611	+		IAI47_18665	0.36	-1.5
3,981,612	-		IAI47_18665	0.36	-0.1
3,981,670	+		IAI47_18665	0.39	-1.2
3,981,670	+		IAI47_18665	0.39	+0.5
3,981,670	+		IAI47_18665	0.39	-0.2
3,981,670	+		IAI47_18665	0.39	-0.1
3,981,758	+		IAI47_18665	0.44	-0.5
3,981,758	+		IAI47_18665	0.44	-1.3
3,981,759	-		IAI47_18665	0.44	-3.4
3,981,759	-		IAI47_18665	0.44	-0.4
3,981,770	+		IAI47_18665	0.45	+0.2
3,981,792	+		IAI47_18665	0.46	+0.5
3,981,792	+		IAI47_18665	0.46	-0.6