Strain Fitness in Pantoea sp. MT58 around IAI47_17685

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,753,037	-		IAI47_17680	0.27	+0.8
3,753,071	+		IAI47_17680	0.30	+1.4
3,753,072	-		IAI47_17680	0.30	+0.6
3,753,072	-		IAI47_17680	0.30	+2.6
3,753,072	-		IAI47_17680	0.30	-1.6
3,753,072	-		IAI47_17680	0.30	-2.0
3,753,152	+		IAI47_17680	0.37	+1.6
3,753,153	-		IAI47_17680	0.37	-0.2
3,753,153	-		IAI47_17680	0.37	-0.3
3,753,193	+		IAI47_17680	0.40	+1.3
3,753,193	+		IAI47_17680	0.40	+1.3
3,753,194	-		IAI47_17680	0.40	-1.0
3,753,194	-		IAI47_17680	0.40	-0.4
3,753,197	+		IAI47_17680	0.40	+1.2
3,753,197	+		IAI47_17680	0.40	-1.0
3,753,197	+		IAI47_17680	0.40	+0.7
3,753,197	+		IAI47_17680	0.40	-1.7
3,753,197	+		IAI47_17680	0.40	+0.8
3,753,197	+		IAI47_17680	0.40	+3.1
3,753,197	+		IAI47_17680	0.40	-1.6
3,753,197	+		IAI47_17680	0.40	+0.9
3,753,197	+		IAI47_17680	0.40	-0.5
3,753,198	-		IAI47_17680	0.40	+0.5
3,753,198	-		IAI47_17680	0.40	+1.1
3,753,198	-		IAI47_17680	0.40	+0.5
3,753,374	+		IAI47_17680	0.55	-1.6
3,753,374	+		IAI47_17680	0.55	+0.7
3,753,374	+		IAI47_17680	0.55	-1.9
3,753,375	-		IAI47_17680	0.55	-0.3
3,753,375	-		IAI47_17680	0.55	+1.7
3,753,375	-		IAI47_17680	0.55	+0.4
3,753,375	-		IAI47_17680	0.55	+2.4
3,753,375	-		IAI47_17680	0.55	-1.0
3,753,410	-		IAI47_17680	0.58	+0.6
3,753,431	+		IAI47_17680	0.60	+0.3
3,753,432	-		IAI47_17680	0.60	+0.7
3,753,432	-		IAI47_17680	0.60	+0.4
3,753,432	-		IAI47_17680	0.60	+0.4
3,753,432	-		IAI47_17680	0.60	-2.4
3,753,432	-		IAI47_17680	0.60	-0.6
3,753,432	-		IAI47_17680	0.60	+1.4
3,753,450	-		IAI47_17680	0.62	+2.5
3,753,455	+		IAI47_17680	0.62	-1.8
3,753,456	-		IAI47_17680	0.62	-0.1
3,753,456	-		IAI47_17680	0.62	+0.4
3,753,456	-		IAI47_17680	0.62	+0.1
3,753,464	+		IAI47_17680	0.63	-1.8
3,753,464	+		IAI47_17680	0.63	-0.9
3,753,464	+		IAI47_17680	0.63	-0.2
3,753,464	+		IAI47_17680	0.63	+0.2
3,753,464	+		IAI47_17680	0.63	-0.5
3,753,464	+		IAI47_17680	0.63	+1.4
3,753,464	+		IAI47_17680	0.63	-0.9
3,753,464	+		IAI47_17680	0.63	+0.8
3,753,464	+		IAI47_17680	0.63	-0.9
3,753,464	+		IAI47_17680	0.63	+1.8
3,753,464	+		IAI47_17680	0.63	-0.9
3,753,464	+		IAI47_17680	0.63	-2.1
3,753,464	+		IAI47_17680	0.63	+0.9
3,753,464	+		IAI47_17680	0.63	+1.1
3,753,465	-		IAI47_17680	0.63	+1.0
3,753,465	-		IAI47_17680	0.63	-1.2
3,753,506	+		IAI47_17680	0.66	+0.1
3,753,506	+		IAI47_17680	0.66	+0.8
3,753,506	+		IAI47_17680	0.66	+1.1
3,753,507	-		IAI47_17680	0.66	-0.2
3,753,507	-		IAI47_17680	0.66	+0.2
3,753,507	-		IAI47_17680	0.66	-1.3
3,753,507	-		IAI47_17680	0.66	-0.3
3,753,507	-		IAI47_17680	0.66	-0.5
3,753,507	-		IAI47_17680	0.66	+0.4
3,753,507	-		IAI47_17680	0.66	-0.5
3,753,507	-		IAI47_17680	0.66	-2.2
3,753,548	+		IAI47_17680	0.70	+1.3
3,753,576	+		IAI47_17680	0.72	-2.1
3,753,577	-		IAI47_17680	0.72	-0.7
3,753,650	+		IAI47_17680	0.78	+2.0
3,753,717	-		IAI47_17680	0.84	-1.1
3,753,792	+				-3.7
3,753,792	+				-1.0
3,753,840	+				+2.5
3,753,841	-				-0.7
3,753,841	-				-2.7
3,753,924	-				-2.0
3,753,944	+				+1.7
3,753,944	+				+2.1
3,753,944	+				+0.2
3,753,944	+				-0.7
3,753,944	+				+0.1
3,753,944	+				+0.8
3,753,944	+				+2.1
3,753,944	+				+0.3
3,753,944	+				-0.0
3,753,944	+				-1.2
3,753,944	+				+0.1
3,753,944	+				+0.7
3,753,944	+				-1.0
3,753,944	+				+0.9
3,753,944	+				-0.6
3,753,944	+				+1.0
3,753,944	+				-0.5
3,753,945	-				-1.6
3,753,945	-				+1.2
3,753,945	-				-1.3
3,753,945	-				+0.3
3,753,945	-				-1.6
3,753,945	-				-1.1
3,753,945	-				+0.7
3,753,945	-				-1.7
3,753,945	-				-0.9
3,753,945	-				+0.8
3,753,945	-				-1.8
3,753,945	-				+0.9
3,753,945	-				+0.1
3,753,945	-				-2.2
3,753,967	+				-2.2
3,753,967	+				-2.3
3,753,967	+				-0.9
3,753,968	-				+1.6
3,753,968	-				+0.8
3,753,976	+				+0.0
3,753,976	+				+1.2
3,753,976	+				-0.1
3,753,977	-				-0.1
3,753,993	+				-1.6
3,754,020	+				+0.7
3,754,063	-				+2.3
3,754,074	+				-0.2
3,754,074	+				+1.0
3,754,074	+				+1.4
3,754,074	+				-1.7
3,754,075	-				-1.7
3,754,113	+		IAI47_17685	0.11	-2.3
3,754,114	-		IAI47_17685	0.11	-1.1
3,754,114	-		IAI47_17685	0.11	-1.7
3,754,366	+		IAI47_17685	0.37	+0.4
3,754,366	+		IAI47_17685	0.37	-1.0
3,754,366	+		IAI47_17685	0.37	+1.3
3,754,366	+		IAI47_17685	0.37	-2.1
3,754,367	-		IAI47_17685	0.37	-1.3
3,754,424	+		IAI47_17685	0.43	+0.5
3,754,424	+		IAI47_17685	0.43	-1.5
3,754,425	-		IAI47_17685	0.43	-1.7
3,754,425	-		IAI47_17685	0.43	+1.6
3,754,613	+		IAI47_17685	0.62	+1.4
3,754,613	+		IAI47_17685	0.62	-0.5
3,754,614	-		IAI47_17685	0.62	+1.2
3,754,769	+		IAI47_17685	0.78	-1.4
3,754,770	-		IAI47_17685	0.79	+0.0
3,754,770	-		IAI47_17685	0.79	+1.0
3,754,785	+		IAI47_17685	0.80	-1.2
3,754,786	-		IAI47_17685	0.80	-0.0
3,754,786	-		IAI47_17685	0.80	-1.3
3,754,786	-		IAI47_17685	0.80	-2.7
3,754,790	+		IAI47_17685	0.81	-1.0
3,754,791	-		IAI47_17685	0.81	+0.4
3,754,860	+		IAI47_17685	0.88	+0.8
3,754,860	+		IAI47_17685	0.88	-0.8
3,754,860	+		IAI47_17685	0.88	-0.2
3,754,860	+		IAI47_17685	0.88	-1.4
3,754,860	+		IAI47_17685	0.88	+1.2
3,754,860	+		IAI47_17685	0.88	+0.8
3,754,861	-		IAI47_17685	0.88	-0.6
3,754,861	-		IAI47_17685	0.88	-1.2
3,754,904	+				+1.7
3,754,974	+				-0.2
3,754,975	-				+1.5
3,755,077	+				+1.2
3,755,077	+				+1.0
3,755,077	+				+0.9
3,755,077	+				+0.9
3,755,077	+				+0.8
3,755,078	-				-1.4
3,755,078	-				+1.1
3,755,078	-				-1.9
3,755,078	-				-0.6
3,755,078	-				-0.8
3,755,093	+				+1.0
3,755,094	-				-0.9
3,755,094	-				-1.4
3,755,094	-				-0.7
3,755,273	-		IAI47_17690	0.19	-0.1
3,755,290	+		IAI47_17690	0.21	+1.1
3,755,291	-		IAI47_17690	0.21	-0.8
3,755,291	-		IAI47_17690	0.21	-0.8
3,755,344	+		IAI47_17690	0.24	-0.5
3,755,344	+		IAI47_17690	0.24	-0.4
3,755,396	-		IAI47_17690	0.27	-2.2
3,755,398	+		IAI47_17690	0.28	+0.5
3,755,399	-		IAI47_17690	0.28	+0.7
3,755,432	+		IAI47_17690	0.30	-1.0
3,755,432	+		IAI47_17690	0.30	+0.0
3,755,433	-		IAI47_17690	0.30	+1.1
3,755,433	-		IAI47_17690	0.30	+2.3
3,755,433	-		IAI47_17690	0.30	-0.6
3,755,433	-		IAI47_17690	0.30	-2.5
3,755,434	+		IAI47_17690	0.30	-0.8
3,755,435	-		IAI47_17690	0.30	-1.0
3,755,435	-		IAI47_17690	0.30	+0.6
3,755,486	-		IAI47_17690	0.33	-2.7
3,755,486	-		IAI47_17690	0.33	+0.1
3,755,543	-		IAI47_17690	0.37	+0.2
3,755,655	+		IAI47_17690	0.44	+1.1
3,755,662	+		IAI47_17690	0.45	-0.6
3,755,662	+		IAI47_17690	0.45	-2.3
3,755,663	-		IAI47_17690	0.45	-0.4
3,755,663	-		IAI47_17690	0.45	-0.5
3,755,663	-		IAI47_17690	0.45	-2.7
3,755,765	+		IAI47_17690	0.51	-0.4
3,755,765	+		IAI47_17690	0.51	-1.4
3,755,765	+		IAI47_17690	0.51	-0.5
3,755,766	-		IAI47_17690	0.51	-2.0
3,755,766	-		IAI47_17690	0.51	-0.9
3,755,766	-		IAI47_17690	0.51	-0.6
3,755,766	-		IAI47_17690	0.51	-0.3
3,755,860	+		IAI47_17690	0.57	-1.4
3,755,861	-		IAI47_17690	0.57	-0.6
3,755,861	-		IAI47_17690	0.57	-2.0
3,755,861	-		IAI47_17690	0.57	+1.2
3,755,861	-		IAI47_17690	0.57	-1.4
3,755,947	-		IAI47_17690	0.63	+0.8