Strain Fitness in Pantoea sp. MT58 around IAI47_16625

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,522,039	+		IAI47_16615	0.82	+1.7
3,522,039	+		IAI47_16615	0.82	-2.1
3,522,039	+		IAI47_16615	0.82	+0.7
3,522,040	-		IAI47_16615	0.83	-0.9
3,522,051	-		IAI47_16615	0.83	-0.1
3,522,057	+		IAI47_16615	0.83	-1.9
3,522,057	+		IAI47_16615	0.83	+0.4
3,522,058	-		IAI47_16615	0.83	-0.7
3,522,058	-		IAI47_16615	0.83	+0.2
3,522,078	+		IAI47_16615	0.85	-1.9
3,522,078	+		IAI47_16615	0.85	+0.1
3,522,079	-		IAI47_16615	0.85	-1.2
3,522,164	+		IAI47_16615	0.89	-0.7
3,522,165	-		IAI47_16615	0.89	+0.9
3,522,173	+		IAI47_16615	0.90	+0.4
3,522,173	+		IAI47_16615	0.90	-0.4
3,522,173	+		IAI47_16615	0.90	-0.1
3,522,173	+		IAI47_16615	0.90	+1.1
3,522,173	+		IAI47_16615	0.90	+0.8
3,522,174	-		IAI47_16615	0.90	-0.1
3,522,174	-		IAI47_16615	0.90	+0.5
3,522,174	-		IAI47_16615	0.90	-0.3
3,522,242	+				+2.1
3,522,243	-				+0.7
3,522,277	+				-0.5
3,522,296	+				-2.0
3,522,315	-				-0.9
3,522,336	-				-0.5
3,522,388	+				+0.4
3,522,392	-				+2.3
3,522,392	-				-0.9
3,522,402	-				+0.8
3,522,406	+				+1.4
3,522,407	-				-2.4
3,522,407	-				+0.7
3,522,423	+				-2.6
3,522,441	-				+0.7
3,522,489	+				-1.3
3,522,496	+				-2.3
3,522,496	+				+0.5
3,522,497	-				-2.2
3,522,507	+				-0.1
3,522,521	+				+1.6
3,522,522	-				+2.5
3,522,522	-				-0.5
3,522,522	-				-0.5
3,522,527	-				-2.5
3,522,527	-				+0.7
3,522,538	+				+0.2
3,522,538	+				-1.6
3,522,539	-				+1.4
3,522,544	+				-1.4
3,522,544	+				-1.0
3,522,545	-				-3.0
3,522,580	+				-2.0
3,522,581	-				-1.8
3,522,581	-				+1.2
3,522,581	-				-1.0
3,522,614	+				+0.2
3,522,617	+				+1.6
3,522,634	-				-1.3
3,522,635	+				+1.9
3,522,639	+				-0.0
3,522,639	+				+1.1
3,522,640	-				-0.2
3,522,675	-				-1.6
3,522,681	+				+0.6
3,522,681	+				+0.5
3,522,729	-				+0.2
3,522,729	-				-2.3
3,522,729	-				+0.5
3,522,729	-				+0.8
3,522,768	+		IAI47_16620	0.21	-0.6
3,522,768	+		IAI47_16620	0.21	-2.0
3,522,769	-		IAI47_16620	0.22	-1.1
3,522,777	+		IAI47_16620	0.24	+0.7
3,522,777	+		IAI47_16620	0.24	+0.2
3,522,777	+		IAI47_16620	0.24	-0.8
3,522,777	+		IAI47_16620	0.24	+1.6
3,522,778	-		IAI47_16620	0.25	+0.5
3,522,809	+		IAI47_16620	0.35	+0.9
3,522,809	+		IAI47_16620	0.35	+0.1
3,522,809	+		IAI47_16620	0.35	+2.8
3,522,809	+		IAI47_16620	0.35	+1.6
3,522,809	+		IAI47_16620	0.35	+1.2
3,522,810	-		IAI47_16620	0.35	+0.1
3,522,810	-		IAI47_16620	0.35	+1.1
3,522,810	-		IAI47_16620	0.35	-0.2
3,522,810	-		IAI47_16620	0.35	-2.4
3,522,818	+		IAI47_16620	0.38	+0.4
3,522,818	+		IAI47_16620	0.38	+0.5
3,522,818	+		IAI47_16620	0.38	+2.6
3,522,819	-		IAI47_16620	0.38	-1.8
3,522,819	-		IAI47_16620	0.38	-0.2
3,522,819	-		IAI47_16620	0.38	-0.9
3,522,819	-		IAI47_16620	0.38	+0.7
3,522,819	-		IAI47_16620	0.38	-0.2
3,522,819	-		IAI47_16620	0.38	+0.2
3,522,819	-		IAI47_16620	0.38	+0.5
3,522,822	+		IAI47_16620	0.39	-0.6
3,522,823	-		IAI47_16620	0.40	+1.4
3,522,823	-		IAI47_16620	0.40	-0.5
3,522,823	-		IAI47_16620	0.40	-1.9
3,522,823	-		IAI47_16620	0.40	-0.5
3,522,841	+		IAI47_16620	0.46	+1.9
3,522,841	+		IAI47_16620	0.46	+0.8
3,522,841	+		IAI47_16620	0.46	-0.5
3,522,841	+		IAI47_16620	0.46	-0.9
3,522,841	+		IAI47_16620	0.46	-0.4
3,522,841	+		IAI47_16620	0.46	+1.4
3,522,842	-		IAI47_16620	0.46	+0.1
3,522,842	-		IAI47_16620	0.46	-2.3
3,522,844	+		IAI47_16620	0.47	-3.0
3,522,844	+		IAI47_16620	0.47	-1.3
3,522,844	+		IAI47_16620	0.47	-1.5
3,522,845	-		IAI47_16620	0.47	+0.7
3,522,858	+		IAI47_16620	0.51	-0.0
3,522,859	-		IAI47_16620	0.51	-0.8
3,522,859	-		IAI47_16620	0.51	-1.8
3,522,865	+		IAI47_16620	0.53	+0.6
3,522,866	-		IAI47_16620	0.54	-1.7
3,522,866	-		IAI47_16620	0.54	+0.9
3,522,866	-		IAI47_16620	0.54	+0.3
3,522,877	+		IAI47_16620	0.57	-0.6
3,522,877	+		IAI47_16620	0.57	-1.8
3,522,947	+		IAI47_16620	0.81	-1.2
3,522,947	+		IAI47_16620	0.81	+1.1
3,522,947	+		IAI47_16620	0.81	+1.5
3,522,956	+		IAI47_16620	0.83	-1.5
3,523,014	+				-1.2
3,523,015	-				-1.2
3,523,017	+				+1.7
3,523,017	+				-0.5
3,523,017	+				+1.4
3,523,017	+				-0.5
3,523,017	+				+1.1
3,523,018	-				-0.3
3,523,018	-				-0.1
3,523,018	-				+1.9
3,523,018	-				+0.2
3,523,018	-				-0.2
3,523,018	-				+0.4
3,523,018	-				-3.4
3,523,018	-				-1.8
3,523,018	-				+0.5
3,523,018	-				+0.9
3,523,021	+				+2.0
3,523,021	+				-0.4
3,523,021	+				+2.4
3,523,021	+				+0.5
3,523,021	+				+1.4
3,523,021	+				-0.2
3,523,022	-				+0.8
3,523,034	+				-2.3
3,523,034	+				+0.0
3,523,034	+				-0.1
3,523,035	-				+0.5
3,523,037	+				+0.7
3,523,037	+				+1.1
3,523,037	+				-0.5
3,523,037	+				+1.3
3,523,037	+				+0.5
3,523,037	+				+1.6
3,523,038	-				-0.9
3,523,038	-				-0.6
3,523,064	+				-0.3
3,523,065	-				-1.1
3,523,065	-				-0.6
3,523,105	+				+0.4
3,523,105	+				-0.4
3,523,105	+				-0.7
3,523,105	+				+0.2
3,523,106	-				-1.4
3,523,106	-				-0.9
3,523,136	+				-0.8
3,523,136	+				+0.8
3,523,136	+				+0.9
3,523,136	+				+0.1
3,523,136	+				-2.2
3,523,136	+				-1.1
3,523,136	+				-1.5
3,523,136	+				+1.1
3,523,136	+				-2.2
3,523,136	+				-2.2
3,523,137	-				-2.2
3,523,137	-				-1.6
3,523,137	-				+1.3
3,523,137	-				-1.6
3,523,138	+				+0.8
3,523,138	+				+0.9
3,523,138	+				-0.1
3,523,139	-				-0.2
3,523,139	-				-1.8
3,523,230	-		IAI47_16625	0.18	+0.5
3,523,241	+		IAI47_16625	0.19	-0.9
3,523,242	-		IAI47_16625	0.19	-1.6
3,523,274	+		IAI47_16625	0.22	-3.0
3,523,275	-		IAI47_16625	0.22	+1.8
3,523,292	+		IAI47_16625	0.23	+2.6
3,523,292	+		IAI47_16625	0.23	+0.5
3,523,292	+		IAI47_16625	0.23	+1.0
3,523,293	-		IAI47_16625	0.24	-0.2
3,523,293	-		IAI47_16625	0.24	+1.2
3,523,293	-		IAI47_16625	0.24	-1.2
3,523,293	-		IAI47_16625	0.24	-2.1
3,523,293	-		IAI47_16625	0.24	+0.7
3,523,293	-		IAI47_16625	0.24	-1.2
3,523,293	-		IAI47_16625	0.24	-0.9
3,523,293	-		IAI47_16625	0.24	-1.4
3,523,328	+		IAI47_16625	0.27	-1.3
3,523,353	+		IAI47_16625	0.29	-0.0
3,523,366	+		IAI47_16625	0.30	+0.5
3,523,397	+		IAI47_16625	0.33	-1.6
3,523,397	+		IAI47_16625	0.33	-1.2
3,523,397	+		IAI47_16625	0.33	-0.5
3,523,398	-		IAI47_16625	0.33	+1.9
3,523,398	-		IAI47_16625	0.33	-0.2
3,523,475	+		IAI47_16625	0.40	-0.2
3,523,475	+		IAI47_16625	0.40	-2.0
3,523,475	+		IAI47_16625	0.40	+1.6
3,523,475	+		IAI47_16625	0.40	-1.2
3,523,476	-		IAI47_16625	0.40	-0.0
3,523,476	-		IAI47_16625	0.40	+0.3
3,523,476	-		IAI47_16625	0.40	-1.0
3,523,476	-		IAI47_16625	0.40	-0.6
3,523,476	-		IAI47_16625	0.40	-0.8
3,523,630	+		IAI47_16625	0.54	+1.4
3,523,630	+		IAI47_16625	0.54	+1.1
3,523,630	+		IAI47_16625	0.54	+0.5
3,523,630	+		IAI47_16625	0.54	+2.4
3,523,631	-		IAI47_16625	0.54	+0.7
3,523,631	-		IAI47_16625	0.54	+0.7
3,523,631	-		IAI47_16625	0.54	-0.6
3,523,631	-		IAI47_16625	0.54	-0.7
3,523,631	-		IAI47_16625	0.54	-3.3
3,523,639	+		IAI47_16625	0.54	-0.9
3,523,734	-		IAI47_16625	0.63	+2.8
3,523,734	-		IAI47_16625	0.63	+0.9
3,523,747	-		IAI47_16625	0.64	-0.5
3,523,747	-		IAI47_16625	0.64	+0.2
3,523,747	-		IAI47_16625	0.64	+0.4
3,523,781	-		IAI47_16625	0.67	+0.0
3,523,890	+		IAI47_16625	0.77	-1.6
3,523,924	+		IAI47_16625	0.80	-0.5
3,524,019	+		IAI47_16625	0.88	+0.2
3,524,019	+		IAI47_16625	0.88	-0.2
3,524,020	-		IAI47_16625	0.88	-1.5
3,524,020	-		IAI47_16625	0.88	-1.6
3,524,020	-		IAI47_16625	0.88	-2.9
3,524,020	-		IAI47_16625	0.88	-0.2
3,524,026	+		IAI47_16625	0.89	-0.3
3,524,026	+		IAI47_16625	0.89	+1.3
3,524,027	-		IAI47_16625	0.89	-2.0
3,524,027	-		IAI47_16625	0.89	-0.3
3,524,027	-		IAI47_16625	0.89	-1.6
3,524,035	+		IAI47_16625	0.90	-0.8
3,524,035	+		IAI47_16625	0.90	+0.9
3,524,035	+		IAI47_16625	0.90	-1.5
3,524,035	+		IAI47_16625	0.90	-0.3
3,524,036	-		IAI47_16625	0.90	-0.9
3,524,036	-		IAI47_16625	0.90	+0.0
3,524,037	+		IAI47_16625	0.90	+0.2
3,524,037	+		IAI47_16625	0.90	-2.2
3,524,037	+		IAI47_16625	0.90	-1.1
3,524,065	+				+0.0
3,524,113	+				-2.9
3,524,113	+				+0.1
3,524,113	+				-1.9
3,524,113	+				+2.5
3,524,114	-				+1.4
3,524,114	-				+2.0
3,524,181	+				-0.3
3,524,181	+				-1.9
3,524,181	+				-1.4
3,524,181	+				-2.8
3,524,181	+				-1.3
3,524,181	+				-2.2
3,524,181	+				-2.6
3,524,181	+				-2.6
3,524,184	+				+0.7
3,524,184	+				+1.6
3,524,184	+				-0.0
3,524,184	+				-0.9
3,524,184	+				+2.5
3,524,197	+				+1.2
3,524,197	+				+1.2
3,524,197	+				-1.0
3,524,197	+				+0.6
3,524,197	+				-0.4
3,524,198	-				-0.8
3,524,198	-				-0.1
3,524,198	-				-1.5
3,524,198	-				-0.8
3,524,198	-				+0.6
3,524,198	-				+2.0
3,524,198	-				+1.0
3,524,200	+				-2.0
3,524,200	+				+0.4
3,524,201	-				-1.3
3,524,201	-				-1.2
3,524,201	-				-0.7
3,524,229	+				-1.5
3,524,246	-				+0.8
3,524,256	+		IAI47_16630	0.11	+0.4
3,524,262	+		IAI47_16630	0.13	-1.9
3,524,262	+		IAI47_16630	0.13	-0.9
3,524,262	+		IAI47_16630	0.13	-0.1
3,524,262	+		IAI47_16630	0.13	-3.3
3,524,263	-		IAI47_16630	0.13	-1.6
3,524,263	-		IAI47_16630	0.13	+0.5
3,524,263	-		IAI47_16630	0.13	-2.0
3,524,298	+		IAI47_16630	0.24	-0.3
3,524,299	-		IAI47_16630	0.24	+0.8
3,524,307	-		IAI47_16630	0.27	+2.0
3,524,307	-		IAI47_16630	0.27	-1.8
3,524,315	+		IAI47_16630	0.29	-0.9
3,524,316	-		IAI47_16630	0.30	-0.3
3,524,317	+		IAI47_16630	0.30	-1.5
3,524,317	+		IAI47_16630	0.30	+0.7
3,524,317	+		IAI47_16630	0.30	-0.2
3,524,317	+		IAI47_16630	0.30	-1.5
3,524,317	+		IAI47_16630	0.30	-1.2
3,524,317	+		IAI47_16630	0.30	-2.1
3,524,317	+		IAI47_16630	0.30	-0.7
3,524,317	+		IAI47_16630	0.30	-2.3
3,524,317	+		IAI47_16630	0.30	-0.6
3,524,317	+		IAI47_16630	0.30	+1.7
3,524,317	+		IAI47_16630	0.30	-1.5
3,524,317	+		IAI47_16630	0.30	-1.9
3,524,317	+		IAI47_16630	0.30	-1.6
3,524,317	+		IAI47_16630	0.30	+0.5
3,524,318	-		IAI47_16630	0.30	-1.9
3,524,318	-		IAI47_16630	0.30	-0.2
3,524,318	-		IAI47_16630	0.30	-1.2
3,524,318	-		IAI47_16630	0.30	-1.5
3,524,318	-		IAI47_16630	0.30	+2.2
3,524,318	-		IAI47_16630	0.30	-0.2
3,524,318	-		IAI47_16630	0.30	+0.6
3,524,318	-		IAI47_16630	0.30	-0.2
3,524,318	-		IAI47_16630	0.30	-1.3
3,524,318	-		IAI47_16630	0.30	-0.6
3,524,318	-		IAI47_16630	0.30	+1.9
3,524,318	-		IAI47_16630	0.30	-0.7
3,524,318	-		IAI47_16630	0.30	+0.1
3,524,318	-		IAI47_16630	0.30	+4.0
3,524,321	+		IAI47_16630	0.31	+2.4
3,524,321	+		IAI47_16630	0.31	-1.8
3,524,321	+		IAI47_16630	0.31	-0.8
3,524,321	+		IAI47_16630	0.31	-0.8
3,524,321	+		IAI47_16630	0.31	-2.5
3,524,321	+		IAI47_16630	0.31	-1.7
3,524,322	-		IAI47_16630	0.31	+2.2
3,524,322	-		IAI47_16630	0.31	+1.2
3,524,322	-		IAI47_16630	0.31	+1.8
3,524,322	-		IAI47_16630	0.31	+0.2
3,524,322	-		IAI47_16630	0.31	-0.2
3,524,355	-		IAI47_16630	0.42	-0.6
3,524,382	+		IAI47_16630	0.50	+0.5
3,524,382	+		IAI47_16630	0.50	-2.8
3,524,382	+		IAI47_16630	0.50	-2.2
3,524,382	+		IAI47_16630	0.50	-0.4
3,524,382	+		IAI47_16630	0.50	-0.2
3,524,382	+		IAI47_16630	0.50	-2.3
3,524,383	-		IAI47_16630	0.50	-1.0
3,524,383	-		IAI47_16630	0.50	+1.8
3,524,383	-		IAI47_16630	0.50	+0.7
3,524,383	-		IAI47_16630	0.50	-1.7
3,524,395	+		IAI47_16630	0.54	-2.7
3,524,396	-		IAI47_16630	0.55	+0.9
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