Strain Fitness in Pantoea sp. MT58 around IAI47_15610

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,288,466	-				-1.3
3,288,506	+				+0.4
3,288,528	+				-0.6
3,288,529	-				-0.4
3,288,529	-				+1.2
3,288,692	+		IAI47_15605	0.29	+0.2
3,288,996	+		IAI47_15605	0.67	+0.4
3,288,997	-		IAI47_15605	0.67	+0.4
3,288,997	-		IAI47_15605	0.67	-0.7
3,289,226	-				-0.1
3,289,334	+				-0.6
3,289,352	-				-1.2
3,289,361	-				+0.7
3,289,361	-				-2.3
3,289,385	-				+0.3
3,289,385	-				-0.1
3,289,456	+				+1.7
3,289,456	+				+1.7
3,289,457	-				-1.3
3,289,457	-				+3.0
3,289,457	-				-1.2
3,289,457	-				+0.5
3,289,461	-				-0.1
3,289,461	-				-1.8
3,289,461	-				+1.2
3,289,474	-				-1.7
3,289,474	-				+1.2
3,289,474	-				-1.3
3,289,474	-				-1.6
3,289,474	-				-0.4
3,289,497	-				+0.6
3,289,527	-		IAI47_15610	0.10	+2.4
3,289,527	-		IAI47_15610	0.10	-3.3
3,289,528	+		IAI47_15610	0.10	+0.4
3,289,529	-		IAI47_15610	0.10	-1.3
3,289,529	-		IAI47_15610	0.10	+1.4
3,289,529	-		IAI47_15610	0.10	+1.7
3,289,529	-		IAI47_15610	0.10	+1.6
3,289,553	-		IAI47_15610	0.11	+0.5
3,289,553	-		IAI47_15610	0.11	+0.3
3,289,553	-		IAI47_15610	0.11	-2.0
3,289,553	-		IAI47_15610	0.11	+0.6
3,289,553	-		IAI47_15610	0.11	+1.4
3,289,607	-		IAI47_15610	0.14	-1.3
3,289,629	-		IAI47_15610	0.15	-0.1
3,289,629	-		IAI47_15610	0.15	+1.0
3,289,629	-		IAI47_15610	0.15	+0.5
3,289,680	-		IAI47_15610	0.17	+0.6
3,289,680	-		IAI47_15610	0.17	+1.1
3,289,682	-		IAI47_15610	0.17	-1.2
3,289,696	+		IAI47_15610	0.18	-1.1
3,289,697	-		IAI47_15610	0.18	-0.9
3,289,697	-		IAI47_15610	0.18	+1.6
3,289,697	-		IAI47_15610	0.18	-1.2
3,289,697	-		IAI47_15610	0.18	+0.4
3,289,697	-		IAI47_15610	0.18	-1.6
3,289,703	-		IAI47_15610	0.18	+0.4
3,289,719	-		IAI47_15610	0.19	+0.3
3,289,791	-		IAI47_15610	0.22	-1.6
3,289,791	-		IAI47_15610	0.22	+2.1
3,289,791	-		IAI47_15610	0.22	+0.1
3,289,853	-		IAI47_15610	0.25	-1.7
3,289,853	-		IAI47_15610	0.25	-0.0
3,289,853	-		IAI47_15610	0.25	+0.8
3,289,853	-		IAI47_15610	0.25	+1.2
3,289,866	-		IAI47_15610	0.26	+2.6
3,289,891	-		IAI47_15610	0.27	-0.5
3,289,891	-		IAI47_15610	0.27	-0.1
3,289,895	-		IAI47_15610	0.27	+1.5
3,289,895	-		IAI47_15610	0.27	+0.7
3,289,895	-		IAI47_15610	0.27	-0.4
3,289,895	-		IAI47_15610	0.27	-0.4
3,289,895	-		IAI47_15610	0.27	-1.8
3,289,895	-		IAI47_15610	0.27	-2.8
3,289,895	-		IAI47_15610	0.27	+2.1
3,289,895	-		IAI47_15610	0.27	+0.7
3,289,895	-		IAI47_15610	0.27	+2.0
3,289,895	-		IAI47_15610	0.27	-1.0
3,289,913	-		IAI47_15610	0.28	-1.0
3,289,913	-		IAI47_15610	0.28	-0.6
3,289,920	-		IAI47_15610	0.28	-1.4
3,289,952	-		IAI47_15610	0.29	-0.3
3,289,952	-		IAI47_15610	0.29	-0.5
3,289,952	-		IAI47_15610	0.29	-1.0
3,289,952	-		IAI47_15610	0.29	-1.4
3,289,952	-		IAI47_15610	0.29	-1.8
3,289,952	-		IAI47_15610	0.29	-1.6
3,289,952	-		IAI47_15610	0.29	-2.3
3,289,952	-		IAI47_15610	0.29	+0.3
3,289,952	-		IAI47_15610	0.29	-0.0
3,289,952	-		IAI47_15610	0.29	-0.1
3,289,952	-		IAI47_15610	0.29	+0.1
3,289,952	-		IAI47_15610	0.29	+0.9
3,289,952	-		IAI47_15610	0.29	-0.7
3,289,952	-		IAI47_15610	0.29	-0.2
3,289,974	-		IAI47_15610	0.30	-2.5
3,289,988	-		IAI47_15610	0.31	+2.3
3,289,988	-		IAI47_15610	0.31	-3.2
3,289,988	-		IAI47_15610	0.31	-1.3
3,289,997	-		IAI47_15610	0.31	+0.2
3,289,997	-		IAI47_15610	0.31	+2.4
3,290,023	+		IAI47_15610	0.33	+0.0
3,290,024	-		IAI47_15610	0.33	+0.9
3,290,024	-		IAI47_15610	0.33	+1.4
3,290,024	-		IAI47_15610	0.33	-0.4
3,290,024	-		IAI47_15610	0.33	+3.3
3,290,024	-		IAI47_15610	0.33	+0.5
3,290,024	-		IAI47_15610	0.33	+2.2
3,290,024	-		IAI47_15610	0.33	-2.0
3,290,093	-		IAI47_15610	0.36	-1.6
3,290,110	+		IAI47_15610	0.37	+1.0
3,290,111	-		IAI47_15610	0.37	-0.2
3,290,111	-		IAI47_15610	0.37	-0.5
3,290,111	-		IAI47_15610	0.37	-1.5
3,290,169	-		IAI47_15610	0.39	-1.3
3,290,169	-		IAI47_15610	0.39	-0.1
3,290,169	-		IAI47_15610	0.39	-0.1
3,290,169	-		IAI47_15610	0.39	+2.1
3,290,169	-		IAI47_15610	0.39	+0.8
3,290,170	+		IAI47_15610	0.39	-2.2
3,290,171	-		IAI47_15610	0.39	+0.7
3,290,206	+		IAI47_15610	0.41	+1.2
3,290,207	-		IAI47_15610	0.41	-0.2
3,290,243	-		IAI47_15610	0.43	-1.0
3,290,243	-		IAI47_15610	0.43	+0.7
3,290,254	-		IAI47_15610	0.43	-1.3
3,290,337	-		IAI47_15610	0.47	-0.8
3,290,337	-		IAI47_15610	0.47	-2.6
3,290,337	-		IAI47_15610	0.47	-1.9
3,290,464	+		IAI47_15610	0.53	-0.2
3,290,464	+		IAI47_15610	0.53	+1.2
3,290,465	-		IAI47_15610	0.53	-0.5
3,290,465	-		IAI47_15610	0.53	+1.4
3,290,465	-		IAI47_15610	0.53	+0.2
3,290,465	-		IAI47_15610	0.53	-1.9
3,290,465	-		IAI47_15610	0.53	-1.5
3,290,465	-		IAI47_15610	0.53	-0.1
3,290,469	-		IAI47_15610	0.53	+2.0
3,290,469	-		IAI47_15610	0.53	+0.4
3,290,469	-		IAI47_15610	0.53	+0.7
3,290,550	-		IAI47_15610	0.57	-1.3
3,290,551	+		IAI47_15610	0.57	-1.5
3,290,552	-		IAI47_15610	0.57	-0.1
3,290,552	-		IAI47_15610	0.57	-1.3
3,290,552	-		IAI47_15610	0.57	-0.6
3,290,624	-		IAI47_15610	0.60	-1.0
3,290,648	+		IAI47_15610	0.61	+0.7
3,290,684	-		IAI47_15610	0.63	+2.4
3,290,714	-		IAI47_15610	0.64	+0.5
3,290,840	-		IAI47_15610	0.70	-1.1
3,290,840	-		IAI47_15610	0.70	-0.1
3,290,845	+		IAI47_15610	0.70	-1.7
3,291,001	-		IAI47_15610	0.77	+2.4
3,291,044	-		IAI47_15610	0.79	+0.3
3,291,067	+		IAI47_15610	0.80	-0.7
3,291,068	-		IAI47_15610	0.80	+1.2
3,291,068	-		IAI47_15610	0.80	+2.2
3,291,068	-		IAI47_15610	0.80	-1.5
3,291,068	-		IAI47_15610	0.80	+0.0
3,291,068	-		IAI47_15610	0.80	+0.6
3,291,068	-		IAI47_15610	0.80	-0.7
3,291,068	-		IAI47_15610	0.80	-0.4
3,291,068	-		IAI47_15610	0.80	-3.0
3,291,068	-		IAI47_15610	0.80	-2.1
3,291,068	-		IAI47_15610	0.80	+1.7
3,291,098	+		IAI47_15610	0.81	-1.7
3,291,098	+		IAI47_15610	0.81	-0.4
3,291,099	-		IAI47_15610	0.81	-0.3
3,291,099	-		IAI47_15610	0.81	-1.2
3,291,099	-		IAI47_15610	0.81	-2.5
3,291,099	-		IAI47_15610	0.81	-2.2
3,291,099	-		IAI47_15610	0.81	+0.2
3,291,100	+		IAI47_15610	0.81	+2.7
3,291,100	+		IAI47_15610	0.81	-1.8
3,291,101	-		IAI47_15610	0.81	-1.6
3,291,101	-		IAI47_15610	0.81	+1.4
3,291,101	-		IAI47_15610	0.81	-3.1
3,291,101	-		IAI47_15610	0.81	-0.5
3,291,101	-		IAI47_15610	0.81	-1.3
3,291,101	-		IAI47_15610	0.81	+0.4
3,291,101	-		IAI47_15610	0.81	-0.3
3,291,110	+		IAI47_15610	0.82	-1.0
3,291,111	-		IAI47_15610	0.82	+2.0
3,291,113	+		IAI47_15610	0.82	-0.3
3,291,180	+		IAI47_15610	0.85	+0.8
3,291,191	+		IAI47_15610	0.86	+1.0
3,291,192	-		IAI47_15610	0.86	-0.4
3,291,192	-		IAI47_15610	0.86	+0.4
3,291,192	-		IAI47_15610	0.86	-0.1
3,291,192	-		IAI47_15610	0.86	-0.6
3,291,192	-		IAI47_15610	0.86	-1.3
3,291,193	+		IAI47_15610	0.86	-0.8
3,291,194	-		IAI47_15610	0.86	+0.7
3,291,194	-		IAI47_15610	0.86	-0.7
3,291,194	-		IAI47_15610	0.86	+0.2
3,291,198	-		IAI47_15610	0.86	-0.6
3,291,198	-		IAI47_15610	0.86	+3.6
3,291,198	-		IAI47_15610	0.86	-0.5
3,291,198	-		IAI47_15610	0.86	+0.0
3,291,198	-		IAI47_15610	0.86	+0.2
3,291,198	-		IAI47_15610	0.86	-1.0
3,291,198	-		IAI47_15610	0.86	-0.7
3,291,198	-		IAI47_15610	0.86	-1.2
3,291,198	-		IAI47_15610	0.86	-0.2
3,291,509	+				-0.4
3,291,510	-				-2.5
3,291,510	-				-1.3
3,291,510	-				-0.6
3,291,510	-				-1.2
3,291,510	-				+0.6
3,291,651	+				+0.3
3,291,652	-				+1.2
3,291,652	-				-1.7
3,291,652	-				-1.5
3,291,654	+				-1.3
3,291,654	+				-0.5
3,291,654	+				-1.1
3,291,654	+				-0.4
3,291,689	+				+0.5
3,291,689	+				-1.2
3,291,689	+				+0.4
3,291,689	+				+0.3
3,291,689	+				-0.2
3,291,689	+				-2.0
3,291,690	-				+1.4
3,291,690	-				-1.5
3,291,690	-				-0.0
3,291,690	-				+0.6
3,291,691	+				-0.6
3,291,692	-				+0.1
3,291,692	-				-1.5
3,291,692	-				-0.8
3,291,711	-				+0.9
3,291,711	-				-1.0
3,291,723	+				+0.2
3,291,723	+				-0.5
3,291,723	+				-1.4
3,291,723	+				+0.9
3,291,723	+				+0.6
3,291,723	+				+0.3
3,291,723	+				-0.3
3,291,723	+				+0.7
3,291,723	+				-0.6
3,291,724	-				+0.7
3,291,724	-				+0.7
3,291,724	-				-1.6
3,291,724	-				+1.4
3,291,742	+				+0.5
3,291,742	+				+0.9
3,291,743	-				+0.6
3,291,743	-				-1.7
3,291,743	-				-0.6
3,292,013	+		IAI47_15615	0.12	+1.3
3,292,023	-		IAI47_15615	0.12	-1.7
3,292,049	+		IAI47_15615	0.13	+0.7
3,292,049	+		IAI47_15615	0.13	+2.6
3,292,049	+		IAI47_15615	0.13	+0.6
3,292,049	+		IAI47_15615	0.13	-0.8
3,292,235	+		IAI47_15615	0.21	-1.2
3,292,235	+		IAI47_15615	0.21	+0.7
3,292,236	-		IAI47_15615	0.21	+1.0
3,292,236	-		IAI47_15615	0.21	+1.4
3,292,236	-		IAI47_15615	0.21	+0.4
3,292,236	-		IAI47_15615	0.21	-0.6
3,292,236	-		IAI47_15615	0.21	-1.0
3,292,236	-		IAI47_15615	0.21	-1.4
3,292,247	+		IAI47_15615	0.21	+0.6
3,292,247	+		IAI47_15615	0.21	-0.7
3,292,248	-		IAI47_15615	0.21	-2.3
3,292,248	-		IAI47_15615	0.21	+1.0
3,292,248	-		IAI47_15615	0.21	+1.6
3,292,286	+		IAI47_15615	0.23	+1.0
3,292,296	-		IAI47_15615	0.23	-1.7
3,292,296	-		IAI47_15615	0.23	+1.0
3,292,296	-		IAI47_15615	0.23	-0.6
3,292,305	+		IAI47_15615	0.24	+0.1
3,292,305	+		IAI47_15615	0.24	+0.5
3,292,305	+		IAI47_15615	0.24	-2.0
3,292,305	+		IAI47_15615	0.24	-1.6
3,292,305	+		IAI47_15615	0.24	-1.4
3,292,306	-		IAI47_15615	0.24	+1.1
3,292,330	+		IAI47_15615	0.25	-0.2
3,292,330	+		IAI47_15615	0.25	+0.9
3,292,330	+		IAI47_15615	0.25	-2.0
3,292,331	-		IAI47_15615	0.25	-0.4
3,292,331	-		IAI47_15615	0.25	-0.8
3,292,476	+		IAI47_15615	0.30	-1.5
3,292,476	+		IAI47_15615	0.30	+0.2
3,292,476	+		IAI47_15615	0.30	+0.4
3,292,506	+		IAI47_15615	0.31	+0.3
3,292,506	+		IAI47_15615	0.31	+0.2
3,292,507	-		IAI47_15615	0.32	-0.4
3,292,507	-		IAI47_15615	0.32	+1.9