Strain Fitness in Pantoea sp. MT58 around IAI47_15135

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,189,896	+		IAI47_15125	0.84	-0.2
3,189,897	-		IAI47_15125	0.84	+1.2
3,189,909	-		IAI47_15125	0.85	+2.5
3,189,933	+		IAI47_15125	0.87	+0.7
3,189,933	+		IAI47_15125	0.87	-1.9
3,189,933	+		IAI47_15125	0.87	+0.2
3,189,934	-		IAI47_15125	0.87	+1.0
3,189,934	-		IAI47_15125	0.87	-0.4
3,189,934	-		IAI47_15125	0.87	+0.6
3,189,934	-		IAI47_15125	0.87	+1.1
3,189,934	-		IAI47_15125	0.87	-1.7
3,189,934	-		IAI47_15125	0.87	-0.3
3,189,934	-		IAI47_15125	0.87	-0.3
3,189,935	+		IAI47_15125	0.87	-0.7
3,189,936	-		IAI47_15125	0.87	+2.3
3,189,954	+		IAI47_15125	0.89	-0.6
3,189,954	+		IAI47_15125	0.89	-0.0
3,189,954	+		IAI47_15125	0.89	-2.4
3,189,954	+		IAI47_15125	0.89	+0.1
3,189,955	-		IAI47_15125	0.89	+0.8
3,189,955	-		IAI47_15125	0.89	+1.4
3,189,955	-		IAI47_15125	0.89	+1.1
3,189,957	+		IAI47_15125	0.89	-0.8
3,189,957	+		IAI47_15125	0.89	-0.7
3,189,957	+		IAI47_15125	0.89	+0.6
3,189,957	+		IAI47_15125	0.89	+0.6
3,189,958	-		IAI47_15125	0.89	-1.5
3,189,958	-		IAI47_15125	0.89	+0.2
3,189,958	-		IAI47_15125	0.89	-3.0
3,189,958	-		IAI47_15125	0.89	-1.5
3,189,958	-		IAI47_15125	0.89	-2.5
3,189,958	-		IAI47_15125	0.89	-0.7
3,189,971	+				+1.4
3,189,972	-				+1.7
3,189,972	-				+0.4
3,189,990	+				+0.9
3,189,991	-				-0.7
3,190,032	-				+1.5
3,190,065	+				+2.1
3,190,065	+				+1.1
3,190,065	+				+0.7
3,190,066	-				+0.1
3,190,066	-				-2.7
3,190,066	-				-2.2
3,190,066	-				-0.1
3,190,122	+				-0.1
3,190,316	+				+2.1
3,190,324	+				+0.0
3,190,324	+				+0.7
3,190,324	+				-1.0
3,190,324	+				-0.1
3,190,325	-				-1.4
3,190,325	-				-0.0
3,190,325	-				+2.2
3,190,329	+				+0.6
3,190,329	+				-2.0
3,190,329	+				-0.1
3,190,329	+				+2.1
3,190,330	-				-1.5
3,190,330	-				-1.7
3,190,335	-				+0.6
3,190,438	+		IAI47_15130	0.25	+0.1
3,190,507	-		IAI47_15130	0.43	-0.1
3,190,526	+		IAI47_15130	0.47	-0.4
3,190,526	+		IAI47_15130	0.47	-0.9
3,190,526	+		IAI47_15130	0.47	-0.3
3,190,526	+		IAI47_15130	0.47	+0.8
3,190,526	+		IAI47_15130	0.47	+0.8
3,190,526	+		IAI47_15130	0.47	-0.0
3,190,527	-		IAI47_15130	0.48	-1.3
3,190,527	-		IAI47_15130	0.48	+1.5
3,190,527	-		IAI47_15130	0.48	-0.8
3,190,527	-		IAI47_15130	0.48	+0.7
3,190,527	-		IAI47_15130	0.48	-0.9
3,190,527	-		IAI47_15130	0.48	+3.7
3,190,527	-		IAI47_15130	0.48	-1.0
3,190,527	-		IAI47_15130	0.48	+2.0
3,190,527	-		IAI47_15130	0.48	-0.8
3,190,527	-		IAI47_15130	0.48	-0.4
3,190,527	-		IAI47_15130	0.48	-0.3
3,190,527	-		IAI47_15130	0.48	-0.0
3,190,532	+		IAI47_15130	0.49	+1.1
3,190,532	+		IAI47_15130	0.49	-2.7
3,190,532	+		IAI47_15130	0.49	-2.1
3,190,532	+		IAI47_15130	0.49	-0.1
3,190,532	+		IAI47_15130	0.49	-0.4
3,190,532	+		IAI47_15130	0.49	+1.3
3,190,532	+		IAI47_15130	0.49	-0.6
3,190,532	+		IAI47_15130	0.49	+4.1
3,190,532	+		IAI47_15130	0.49	-0.3
3,190,532	+		IAI47_15130	0.49	-0.1
3,190,532	+		IAI47_15130	0.49	-0.6
3,190,533	-		IAI47_15130	0.49	+0.2
3,190,533	-		IAI47_15130	0.49	-0.9
3,190,533	-		IAI47_15130	0.49	+0.9
3,190,533	-		IAI47_15130	0.49	+1.2
3,190,533	-		IAI47_15130	0.49	-0.9
3,190,533	-		IAI47_15130	0.49	-1.0
3,190,533	-		IAI47_15130	0.49	+1.5
3,190,536	+		IAI47_15130	0.50	+0.7
3,190,536	+		IAI47_15130	0.50	-1.7
3,190,536	+		IAI47_15130	0.50	+1.6
3,190,536	+		IAI47_15130	0.50	-2.3
3,190,536	+		IAI47_15130	0.50	+1.9
3,190,536	+		IAI47_15130	0.50	+1.2
3,190,536	+		IAI47_15130	0.50	+0.5
3,190,536	+		IAI47_15130	0.50	-2.9
3,190,536	+		IAI47_15130	0.50	-1.2
3,190,536	+		IAI47_15130	0.50	+0.3
3,190,536	+		IAI47_15130	0.50	+0.6
3,190,537	-		IAI47_15130	0.50	-0.3
3,190,537	-		IAI47_15130	0.50	-0.1
3,190,537	-		IAI47_15130	0.50	+0.2
3,190,537	-		IAI47_15130	0.50	-3.3
3,190,537	-		IAI47_15130	0.50	+1.1
3,190,537	-		IAI47_15130	0.50	-0.0
3,190,671	+		IAI47_15130	0.83	+3.2
3,190,671	+		IAI47_15130	0.83	-0.3
3,190,671	+		IAI47_15130	0.83	+2.3
3,190,671	+		IAI47_15130	0.83	+0.0
3,190,672	-		IAI47_15130	0.84	+0.8
3,190,672	-		IAI47_15130	0.84	+1.2
3,190,672	-		IAI47_15130	0.84	+3.2
3,190,673	+		IAI47_15130	0.84	+2.1
3,190,673	+		IAI47_15130	0.84	+1.1
3,190,673	+		IAI47_15130	0.84	-0.0
3,190,673	+		IAI47_15130	0.84	-0.0
3,190,673	+		IAI47_15130	0.84	+0.3
3,190,674	-		IAI47_15130	0.84	+1.0
3,190,674	-		IAI47_15130	0.84	+0.0
3,190,698	+				+1.8
3,190,729	+				+4.0
3,190,729	+				+1.1
3,190,751	-				-1.6
3,190,751	-				-2.2
3,190,764	+				-1.7
3,190,765	-				-1.8
3,190,766	+				+0.6
3,190,766	+				-2.2
3,190,766	+				+0.4
3,190,766	+				+1.5
3,190,766	+				-1.7
3,190,766	+				-1.1
3,190,767	-				+0.9
3,190,767	-				+1.0
3,190,767	-				+0.2
3,190,767	-				-0.1
3,190,767	-				-0.4
3,190,767	-				+1.0
3,190,767	-				+0.1
3,190,767	-				-0.4
3,190,767	-				-2.0
3,190,800	+				-1.2
3,190,800	+				+0.4
3,190,800	+				-0.3
3,190,801	-				-0.6
3,190,801	-				-1.7
3,190,827	-				+1.2
3,190,827	-				+0.4
3,190,827	-				+1.4
3,190,827	-				-0.7
3,190,827	-				-0.1
3,190,827	-				-1.3
3,190,836	-				+0.4
3,190,863	+				-0.4
3,190,863	+				+1.0
3,190,863	+				-1.6
3,190,863	+				+2.2
3,190,863	+				-0.8
3,190,863	+				-2.1
3,190,863	+				-0.1
3,190,863	+				+0.1
3,190,863	+				-0.4
3,190,864	-				+1.2
3,190,864	-				+0.7
3,190,864	-				+0.1
3,190,864	-				-1.8
3,190,864	-				-2.0
3,190,869	+				-1.4
3,190,870	-				+0.2
3,190,877	-				-0.1
3,191,014	-				-2.8
3,191,057	+		IAI47_15135	0.13	-0.1
3,191,095	+		IAI47_15135	0.16	+1.1
3,191,096	-		IAI47_15135	0.16	-1.6
3,191,109	+		IAI47_15135	0.17	+1.1
3,191,164	-		IAI47_15135	0.22	-1.8
3,191,184	+		IAI47_15135	0.23	-1.4
3,191,184	+		IAI47_15135	0.23	+0.1
3,191,184	+		IAI47_15135	0.23	-2.6
3,191,185	-		IAI47_15135	0.23	-1.1
3,191,185	-		IAI47_15135	0.23	-1.9
3,191,185	-		IAI47_15135	0.23	-1.5
3,191,190	+		IAI47_15135	0.24	+0.3
3,191,190	+		IAI47_15135	0.24	-0.3
3,191,190	+		IAI47_15135	0.24	-1.4
3,191,190	+		IAI47_15135	0.24	-1.8
3,191,190	+		IAI47_15135	0.24	-0.7
3,191,190	+		IAI47_15135	0.24	+1.5
3,191,190	+		IAI47_15135	0.24	-1.0
3,191,190	+		IAI47_15135	0.24	+0.4
3,191,190	+		IAI47_15135	0.24	-1.3
3,191,190	+		IAI47_15135	0.24	-1.2
3,191,190	+		IAI47_15135	0.24	+0.3
3,191,190	+		IAI47_15135	0.24	-1.1
3,191,191	-		IAI47_15135	0.24	+3.0
3,191,191	-		IAI47_15135	0.24	-0.4
3,191,191	-		IAI47_15135	0.24	+0.1
3,191,191	-		IAI47_15135	0.24	-2.8
3,191,191	-		IAI47_15135	0.24	-0.7
3,191,191	-		IAI47_15135	0.24	-1.2
3,191,191	-		IAI47_15135	0.24	+2.3
3,191,191	-		IAI47_15135	0.24	-1.4
3,191,191	-		IAI47_15135	0.24	-1.6
3,191,191	-		IAI47_15135	0.24	+0.9
3,191,192	+		IAI47_15135	0.24	-0.1
3,191,192	+		IAI47_15135	0.24	-1.2
3,191,192	+		IAI47_15135	0.24	-1.1
3,191,192	+		IAI47_15135	0.24	-0.2
3,191,192	+		IAI47_15135	0.24	-0.7
3,191,192	+		IAI47_15135	0.24	-1.2
3,191,192	+		IAI47_15135	0.24	-1.9
3,191,192	+		IAI47_15135	0.24	-0.5
3,191,192	+		IAI47_15135	0.24	+0.2
3,191,192	+		IAI47_15135	0.24	-2.2
3,191,192	+		IAI47_15135	0.24	+0.1
3,191,192	+		IAI47_15135	0.24	-1.7
3,191,192	+		IAI47_15135	0.24	-1.8
3,191,192	+		IAI47_15135	0.24	-1.0
3,191,192	+		IAI47_15135	0.24	-0.9
3,191,192	+		IAI47_15135	0.24	-1.4
3,191,192	+		IAI47_15135	0.24	-1.8
3,191,192	+		IAI47_15135	0.24	-1.7
3,191,192	+		IAI47_15135	0.24	-0.8
3,191,192	+		IAI47_15135	0.24	+0.6
3,191,192	+		IAI47_15135	0.24	-1.5
3,191,192	+		IAI47_15135	0.24	-1.4
3,191,192	+		IAI47_15135	0.24	-1.3
3,191,192	+		IAI47_15135	0.24	-1.0
3,191,192	+		IAI47_15135	0.24	-1.2
3,191,192	+		IAI47_15135	0.24	+0.1
3,191,192	+		IAI47_15135	0.24	+0.7
3,191,192	+		IAI47_15135	0.24	+0.3
3,191,192	+		IAI47_15135	0.24	+2.1
3,191,192	+		IAI47_15135	0.24	-0.2
3,191,192	+		IAI47_15135	0.24	+0.3
3,191,192	+		IAI47_15135	0.24	-1.4
3,191,192	+		IAI47_15135	0.24	-1.7
3,191,192	+		IAI47_15135	0.24	-0.2
3,191,192	+		IAI47_15135	0.24	-0.6
3,191,192	+		IAI47_15135	0.24	-0.8
3,191,192	+		IAI47_15135	0.24	-0.8
3,191,192	+		IAI47_15135	0.24	-0.1
3,191,192	+		IAI47_15135	0.24	-0.4
3,191,192	+		IAI47_15135	0.24	+1.1
3,191,192	+		IAI47_15135	0.24	-0.7
3,191,193	-		IAI47_15135	0.24	-0.3
3,191,193	-		IAI47_15135	0.24	+0.0
3,191,193	-		IAI47_15135	0.24	-1.8
3,191,193	-		IAI47_15135	0.24	+0.1
3,191,193	-		IAI47_15135	0.24	-2.5
3,191,193	-		IAI47_15135	0.24	-1.5
3,191,193	-		IAI47_15135	0.24	+0.3
3,191,193	-		IAI47_15135	0.24	+1.0
3,191,193	-		IAI47_15135	0.24	+1.4
3,191,193	-		IAI47_15135	0.24	-3.7
3,191,193	-		IAI47_15135	0.24	-2.5
3,191,193	-		IAI47_15135	0.24	-1.2
3,191,193	-		IAI47_15135	0.24	-0.2
3,191,193	-		IAI47_15135	0.24	-1.6
3,191,193	-		IAI47_15135	0.24	-2.2
3,191,193	-		IAI47_15135	0.24	-1.7
3,191,193	-		IAI47_15135	0.24	+0.0
3,191,193	-		IAI47_15135	0.24	+0.0
3,191,193	-		IAI47_15135	0.24	-1.8
3,191,193	-		IAI47_15135	0.24	-1.0
3,191,193	-		IAI47_15135	0.24	-1.9
3,191,193	-		IAI47_15135	0.24	-2.5
3,191,193	-		IAI47_15135	0.24	-1.6
3,191,193	-		IAI47_15135	0.24	-1.9
3,191,193	-		IAI47_15135	0.24	-1.7
3,191,193	-		IAI47_15135	0.24	+1.5
3,191,193	-		IAI47_15135	0.24	-1.9
3,191,193	-		IAI47_15135	0.24	-1.1
3,191,193	-		IAI47_15135	0.24	-1.4
3,191,193	-		IAI47_15135	0.24	+0.7
3,191,193	-		IAI47_15135	0.24	+2.7
3,191,193	-		IAI47_15135	0.24	-2.3
3,191,193	-		IAI47_15135	0.24	+0.6
3,191,193	-		IAI47_15135	0.24	-1.5
3,191,196	+		IAI47_15135	0.24	-0.0
3,191,196	+		IAI47_15135	0.24	-2.2
3,191,196	+		IAI47_15135	0.24	-0.1
3,191,196	+		IAI47_15135	0.24	-1.7
3,191,196	+		IAI47_15135	0.24	-0.3
3,191,197	-		IAI47_15135	0.24	-1.6
3,191,197	-		IAI47_15135	0.24	+1.1
3,191,291	+		IAI47_15135	0.32	+0.9
3,191,291	+		IAI47_15135	0.32	-1.2
3,191,292	-		IAI47_15135	0.32	-1.0
3,191,292	-		IAI47_15135	0.32	-1.9
3,191,374	+		IAI47_15135	0.38	-0.2
3,191,374	+		IAI47_15135	0.38	+1.4
3,191,374	+		IAI47_15135	0.38	-0.6
3,191,374	+		IAI47_15135	0.38	+1.0
3,191,469	+		IAI47_15135	0.46	+1.6
3,191,469	+		IAI47_15135	0.46	-1.7
3,191,469	+		IAI47_15135	0.46	-3.1
3,191,469	+		IAI47_15135	0.46	+0.1
3,191,469	+		IAI47_15135	0.46	-2.0
3,191,470	-		IAI47_15135	0.46	-0.7
3,191,470	-		IAI47_15135	0.46	+0.9
3,191,470	-		IAI47_15135	0.46	-0.1
3,191,470	-		IAI47_15135	0.46	-1.5
3,191,470	-		IAI47_15135	0.46	-0.6
3,191,470	-		IAI47_15135	0.46	-0.6
3,191,492	+		IAI47_15135	0.48	-0.9
3,191,492	+		IAI47_15135	0.48	-2.8
3,191,492	+		IAI47_15135	0.48	-2.4
3,191,492	+		IAI47_15135	0.48	-0.9
3,191,492	+		IAI47_15135	0.48	-0.6
3,191,492	+		IAI47_15135	0.48	-0.6
3,191,492	+		IAI47_15135	0.48	-2.4
3,191,492	+		IAI47_15135	0.48	-1.5
3,191,492	+		IAI47_15135	0.48	+0.8
3,191,492	+		IAI47_15135	0.48	+2.0
3,191,493	-		IAI47_15135	0.48	-0.7
3,191,493	-		IAI47_15135	0.48	-2.7
3,191,493	-		IAI47_15135	0.48	-1.6
3,191,493	-		IAI47_15135	0.48	+2.3
3,191,525	-		IAI47_15135	0.51	-1.7
3,191,551	+		IAI47_15135	0.53	-2.0
3,191,552	-		IAI47_15135	0.53	-1.3
3,191,586	+		IAI47_15135	0.55	-1.8
3,191,586	+		IAI47_15135	0.55	-2.1
3,191,587	-		IAI47_15135	0.56	+2.5
3,191,587	-		IAI47_15135	0.56	-0.1
3,191,587	-		IAI47_15135	0.56	-0.7
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3,191,623	-		IAI47_15135	0.58	-0.7
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3,192,096	+				-3.2
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