Strain Fitness in Pantoea sp. MT58 around IAI47_14930

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,148,889	-				+0.2
3,148,897	+				+0.8
3,148,897	+				+0.5
3,148,898	-				+2.1
3,148,917	-				-0.2
3,148,944	+				-0.9
3,148,944	+				-1.9
3,148,944	+				-0.9
3,148,944	+				+0.8
3,148,945	-				-0.7
3,148,945	-				-2.7
3,148,945	-				-1.9
3,148,945	-				-1.7
3,148,955	+				+2.1
3,148,962	+				-0.3
3,148,994	+				-0.9
3,149,001	+				-3.1
3,149,012	+				+0.9
3,149,024	+		IAI47_14920	0.10	+2.0
3,149,024	+		IAI47_14920	0.10	-1.5
3,149,024	+		IAI47_14920	0.10	-0.2
3,149,024	+		IAI47_14920	0.10	-1.3
3,149,024	+		IAI47_14920	0.10	+1.7
3,149,024	+		IAI47_14920	0.10	+0.0
3,149,025	-		IAI47_14920	0.11	-0.3
3,149,025	-		IAI47_14920	0.11	-1.0
3,149,025	-		IAI47_14920	0.11	+1.4
3,149,076	+		IAI47_14920	0.28	-1.5
3,149,076	+		IAI47_14920	0.28	+0.2
3,149,077	-		IAI47_14920	0.28	+0.9
3,149,077	-		IAI47_14920	0.28	+2.0
3,149,077	-		IAI47_14920	0.28	+1.9
3,149,133	+		IAI47_14920	0.47	-1.6
3,149,186	+		IAI47_14920	0.65	-3.1
3,149,186	+		IAI47_14920	0.65	-1.5
3,149,187	-		IAI47_14920	0.65	-0.6
3,149,187	-		IAI47_14920	0.65	+0.7
3,149,187	-		IAI47_14920	0.65	-1.7
3,149,247	+		IAI47_14920	0.86	+0.3
3,149,271	-				-2.0
3,149,271	-				+1.7
3,149,271	-				+1.1
3,149,277	+				-1.6
3,149,289	+				+0.7
3,149,289	+				-1.3
3,149,289	+				-1.0
3,149,289	+				+0.1
3,149,289	+				+1.2
3,149,290	-				-1.4
3,149,290	-				+0.4
3,149,292	+				-2.2
3,149,292	+				+0.3
3,149,292	+				-1.7
3,149,292	+				-1.6
3,149,292	+				+0.8
3,149,292	+				+0.8
3,149,292	+				-0.0
3,149,292	+				+0.7
3,149,292	+				+0.3
3,149,292	+				-2.0
3,149,293	-				+0.3
3,149,293	-				+0.1
3,149,293	-				-0.5
3,149,293	-				-0.3
3,149,293	-				+1.0
3,149,293	-				-0.0
3,149,293	-				-1.7
3,149,293	-				-1.3
3,149,293	-				-0.5
3,149,328	+				+0.1
3,149,328	+				+1.0
3,149,328	+				-0.3
3,149,328	+				+1.1
3,149,328	+				+0.1
3,149,329	-				+1.2
3,149,329	-				+1.2
3,149,329	-				-1.5
3,149,473	+				-0.7
3,149,490	+				-0.1
3,149,490	+				+0.9
3,149,491	-				+0.8
3,149,491	-				+1.3
3,149,491	-				-0.7
3,149,491	-				+0.7
3,149,491	-				+0.7
3,149,504	+				-0.9
3,149,504	+				+3.5
3,149,504	+				+1.8
3,149,532	+				+0.1
3,149,533	-				-1.1
3,149,567	-				+0.0
3,149,567	-				-0.1
3,149,567	-				+0.3
3,149,587	+		IAI47_14925	0.11	-0.7
3,149,597	+		IAI47_14925	0.17	+0.9
3,149,597	+		IAI47_14925	0.17	+1.1
3,149,598	-		IAI47_14925	0.17	-3.4
3,149,598	-		IAI47_14925	0.17	-0.5
3,149,638	-		IAI47_14925	0.38	+0.2
3,149,638	-		IAI47_14925	0.38	+1.8
3,149,638	-		IAI47_14925	0.38	+0.7
3,149,674	+		IAI47_14925	0.57	+0.5
3,149,674	+		IAI47_14925	0.57	+0.8
3,149,674	+		IAI47_14925	0.57	+1.5
3,149,675	-		IAI47_14925	0.57	+0.0
3,149,682	+		IAI47_14925	0.61	+2.0
3,149,682	+		IAI47_14925	0.61	+0.6
3,149,687	+		IAI47_14925	0.64	+0.5
3,149,687	+		IAI47_14925	0.64	-1.7
3,149,687	+		IAI47_14925	0.64	+2.4
3,149,687	+		IAI47_14925	0.64	+0.5
3,149,687	+		IAI47_14925	0.64	-0.2
3,149,688	-		IAI47_14925	0.64	-1.7
3,149,688	-		IAI47_14925	0.64	-2.7
3,149,688	-		IAI47_14925	0.64	-2.0
3,149,688	-		IAI47_14925	0.64	-0.9
3,149,688	-		IAI47_14925	0.64	-0.3
3,149,688	-		IAI47_14925	0.64	-0.1
3,149,688	-		IAI47_14925	0.64	+0.4
3,149,688	-		IAI47_14925	0.64	-0.9
3,149,688	-		IAI47_14925	0.64	-3.0
3,149,690	+		IAI47_14925	0.65	-1.2
3,149,690	+		IAI47_14925	0.65	-0.9
3,149,690	+		IAI47_14925	0.65	+0.3
3,149,691	-		IAI47_14925	0.66	+0.2
3,149,691	-		IAI47_14925	0.66	-1.2
3,149,691	-		IAI47_14925	0.66	-1.9
3,149,691	-		IAI47_14925	0.66	+0.7
3,149,751	-				-1.3
3,149,751	-				+0.9
3,149,751	-				-0.3
3,149,756	+				-0.3
3,149,756	+				+1.1
3,149,756	+				-0.5
3,149,756	+				-0.5
3,149,756	+				+0.1
3,149,756	+				+1.8
3,149,757	-				+0.4
3,149,757	-				-1.2
3,149,757	-				-2.8
3,149,757	-				-1.4
3,149,757	-				+0.0
3,149,810	+				-0.8
3,149,810	+				-2.1
3,149,810	+				+0.5
3,149,815	+				+1.1
3,149,815	+				-0.4
3,149,815	+				-1.2
3,149,815	+				+1.9
3,149,815	+				-0.9
3,149,815	+				-0.1
3,149,815	+				+2.0
3,149,815	+				-1.5
3,149,816	-				-1.4
3,149,816	-				+0.6
3,149,816	-				+1.4
3,149,816	-				+0.5
3,149,819	+				+0.8
3,149,819	+				+1.5
3,149,819	+				+1.2
3,149,820	-				-2.6
3,149,820	-				-0.2
3,149,820	-				+2.3
3,149,820	-				+2.8
3,149,820	-				-1.1
3,149,821	+				+0.5
3,149,821	+				+1.8
3,149,821	+				-0.9
3,149,822	-				-1.6
3,149,822	-				-0.9
3,149,822	-				+0.2
3,149,870	-				+0.3
3,149,870	-				+0.9
3,150,025	-		IAI47_14930	0.30	-1.1
3,150,123	-		IAI47_14930	0.49	-0.6
3,150,123	-		IAI47_14930	0.49	-1.1
3,150,123	-		IAI47_14930	0.49	-1.8
3,150,123	-		IAI47_14930	0.49	+1.7
3,150,123	-		IAI47_14930	0.49	-1.2
3,150,123	-		IAI47_14930	0.49	-1.0
3,150,296	+		IAI47_14930	0.82	-1.9
3,150,302	+		IAI47_14930	0.83	-0.2
3,150,384	+				-0.6
3,150,385	-				-1.2
3,150,385	-				-0.7
3,150,437	-				-0.5
3,150,437	-				-1.1
3,150,444	+				-1.9
3,150,444	+				-0.9
3,150,445	-				+0.7
3,150,456	+				-0.5
3,150,456	+				+0.4
3,150,456	+				+3.2
3,150,459	+				+2.3
3,150,459	+				+0.6
3,150,470	+				-0.4
3,150,501	-				+0.4
3,150,536	+				+0.8
3,150,603	-				-2.8
3,150,630	+				-1.2
3,150,630	+				-0.6
3,150,638	+				+1.7
3,150,676	-				-0.4
3,150,676	-				-0.4
3,150,676	-				-0.3
3,150,677	+				+0.4
3,150,677	+				+0.9
3,150,677	+				+0.4
3,150,677	+				-0.9
3,150,677	+				+2.1
3,150,677	+				+1.6
3,150,677	+				-0.4
3,150,677	+				-0.5
3,150,677	+				+0.5
3,150,677	+				-1.7
3,150,678	-				+0.5
3,150,678	-				+0.2
3,150,678	-				+1.4
3,150,678	-				+1.2
3,150,678	-				+0.6
3,150,678	-				-0.5
3,150,678	-				+1.4
3,150,678	-				-0.3
3,150,678	-				-0.1
3,150,678	-				-0.7
3,150,678	-				-0.8
3,150,678	-				+0.3
3,150,678	-				-0.4
3,150,678	-				-0.4
3,150,678	-				-1.6
3,150,678	-				-0.3
3,150,678	-				+0.6
3,150,678	-				-1.9
3,150,678	-				-0.7
3,150,683	+				-0.2
3,150,683	+				+0.4
3,150,684	-				-0.6
3,150,684	-				-0.2
3,150,810	-		IAI47_14935	0.14	+0.4
3,150,843	+		IAI47_14935	0.19	+1.0
3,150,843	+		IAI47_14935	0.19	+0.4
3,150,843	+		IAI47_14935	0.19	+0.1
3,150,843	+		IAI47_14935	0.19	+0.8
3,150,844	-		IAI47_14935	0.19	+1.0
3,150,844	-		IAI47_14935	0.19	-2.9
3,150,844	-		IAI47_14935	0.19	-1.4
3,150,846	+		IAI47_14935	0.19	+0.5
3,150,846	+		IAI47_14935	0.19	+1.0
3,150,846	+		IAI47_14935	0.19	-1.0
3,150,846	+		IAI47_14935	0.19	+1.6
3,150,846	+		IAI47_14935	0.19	-0.2
3,150,847	-		IAI47_14935	0.19	-2.4
3,150,847	-		IAI47_14935	0.19	+0.8
3,150,847	-		IAI47_14935	0.19	-0.4
3,150,847	-		IAI47_14935	0.19	+1.1
3,150,847	-		IAI47_14935	0.19	+0.8
3,150,847	-		IAI47_14935	0.19	-0.1
3,150,847	-		IAI47_14935	0.19	-0.0
3,150,847	-		IAI47_14935	0.19	-1.7
3,150,847	-		IAI47_14935	0.19	+0.2
3,150,847	-		IAI47_14935	0.19	-0.9
3,150,847	-		IAI47_14935	0.19	-1.3
3,151,086	+		IAI47_14935	0.52	+2.9
3,151,086	+		IAI47_14935	0.52	+0.7
3,151,086	+		IAI47_14935	0.52	-0.2
3,151,086	+		IAI47_14935	0.52	-0.6
3,151,086	+		IAI47_14935	0.52	+0.1
3,151,086	+		IAI47_14935	0.52	-0.1
3,151,086	+		IAI47_14935	0.52	+1.2
3,151,087	-		IAI47_14935	0.52	+0.4
3,151,087	-		IAI47_14935	0.52	-2.7
3,151,087	-		IAI47_14935	0.52	+0.7
3,151,232	+		IAI47_14935	0.72	-0.5
3,151,232	+		IAI47_14935	0.72	-1.5
3,151,232	+		IAI47_14935	0.72	-2.2
3,151,232	+		IAI47_14935	0.72	-0.7
3,151,233	-		IAI47_14935	0.72	-2.6
3,151,233	-		IAI47_14935	0.72	+1.2
3,151,268	+		IAI47_14935	0.77	+2.1
3,151,268	+		IAI47_14935	0.77	-0.1
3,151,268	+		IAI47_14935	0.77	-0.2
3,151,307	+		IAI47_14935	0.82	-1.1
3,151,308	-		IAI47_14935	0.82	+2.8
3,151,314	-		IAI47_14935	0.83	-0.4
3,151,368	+				-0.5
3,151,369	-				-1.4
3,151,369	-				+0.6
3,151,369	-				-1.4
3,151,369	-				-1.8