Strain Fitness in Pantoea sp. MT58 around IAI47_14495

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,060,503	+		IAI47_14485	0.12	+0.6
3,060,504	-		IAI47_14485	0.12	+2.3
3,060,504	-		IAI47_14485	0.12	+1.8
3,060,512	+		IAI47_14485	0.14	-1.5
3,060,512	+		IAI47_14485	0.14	+2.1
3,060,512	+		IAI47_14485	0.14	-2.2
3,060,512	+		IAI47_14485	0.14	+1.9
3,060,512	+		IAI47_14485	0.14	-1.3
3,060,513	-		IAI47_14485	0.15	-0.2
3,060,513	-		IAI47_14485	0.15	+2.6
3,060,513	-		IAI47_14485	0.15	+3.5
3,060,513	-		IAI47_14485	0.15	+1.1
3,060,513	-		IAI47_14485	0.15	-0.9
3,060,590	+		IAI47_14485	0.34	-0.3
3,060,591	-		IAI47_14485	0.35	+1.4
3,060,604	-		IAI47_14485	0.38	-2.0
3,060,614	+		IAI47_14485	0.41	+0.1
3,060,614	+		IAI47_14485	0.41	+0.2
3,060,614	+		IAI47_14485	0.41	+1.0
3,060,615	-		IAI47_14485	0.41	+3.9
3,060,615	-		IAI47_14485	0.41	+1.0
3,060,615	-		IAI47_14485	0.41	-0.3
3,060,670	+		IAI47_14485	0.55	-0.2
3,060,671	-		IAI47_14485	0.55	+0.1
3,060,764	+		IAI47_14485	0.79	+0.7
3,060,764	+		IAI47_14485	0.79	+0.1
3,060,764	+		IAI47_14485	0.79	-1.0
3,060,764	+		IAI47_14485	0.79	-0.9
3,060,765	-		IAI47_14485	0.79	+2.1
3,060,765	-		IAI47_14485	0.79	+0.8
3,060,768	+		IAI47_14485	0.80	+1.6
3,060,768	+		IAI47_14485	0.80	-1.4
3,060,768	+		IAI47_14485	0.80	+0.3
3,060,768	+		IAI47_14485	0.80	-0.9
3,060,768	+		IAI47_14485	0.80	+2.0
3,060,769	-		IAI47_14485	0.80	+1.1
3,060,769	-		IAI47_14485	0.80	-1.5
3,060,771	+		IAI47_14485	0.81	-0.0
3,060,771	+		IAI47_14485	0.81	-0.1
3,060,772	-		IAI47_14485	0.81	+0.3
3,060,772	-		IAI47_14485	0.81	-0.3
3,060,772	-		IAI47_14485	0.81	+1.6
3,060,772	-		IAI47_14485	0.81	-2.2
3,060,777	+		IAI47_14485	0.82	+1.4
3,060,777	+		IAI47_14485	0.82	-1.5
3,060,778	-		IAI47_14485	0.83	-0.9
3,060,778	-		IAI47_14485	0.83	-0.3
3,060,780	+		IAI47_14485	0.83	-0.2
3,060,780	+		IAI47_14485	0.83	+0.8
3,060,780	+		IAI47_14485	0.83	-1.6
3,060,780	+		IAI47_14485	0.83	-2.1
3,060,780	+		IAI47_14485	0.83	-0.3
3,060,781	-		IAI47_14485	0.83	-1.9
3,060,781	-		IAI47_14485	0.83	-0.3
3,060,781	-		IAI47_14485	0.83	+1.0
3,060,781	-		IAI47_14485	0.83	-0.7
3,060,781	-		IAI47_14485	0.83	+1.1
3,060,781	-		IAI47_14485	0.83	+0.2
3,060,781	-		IAI47_14485	0.83	-1.7
3,060,781	-		IAI47_14485	0.83	-0.6
3,060,781	-		IAI47_14485	0.83	-0.3
3,060,781	-		IAI47_14485	0.83	+0.7
3,060,781	-		IAI47_14485	0.83	-0.1
3,060,825	+				-2.8
3,060,826	-				+0.5
3,060,826	-				+0.9
3,060,828	+				-2.0
3,060,828	+				-0.9
3,060,829	-				+1.7
3,060,829	-				-0.5
3,060,876	+				-1.5
3,060,876	+				+0.4
3,060,876	+				+1.8
3,060,877	-				+0.4
3,060,877	-				+0.4
3,060,881	+				-0.2
3,060,881	+				-1.3
3,060,882	-				-0.2
3,060,882	-				+3.1
3,060,992	+		IAI47_14490	0.17	-1.0
3,060,992	+		IAI47_14490	0.17	-0.1
3,060,993	-		IAI47_14490	0.17	-0.9
3,060,993	-		IAI47_14490	0.17	-0.5
3,061,047	+		IAI47_14490	0.27	-1.1
3,061,048	-		IAI47_14490	0.27	-0.4
3,061,048	-		IAI47_14490	0.27	-2.6
3,061,170	-		IAI47_14490	0.50	-1.4
3,061,227	+		IAI47_14490	0.61	+1.3
3,061,227	+		IAI47_14490	0.61	-0.3
3,061,228	-		IAI47_14490	0.61	+0.7
3,061,237	-		IAI47_14490	0.63	-0.0
3,061,348	+		IAI47_14490	0.84	-0.2
3,061,348	+		IAI47_14490	0.84	+0.4
3,061,349	-		IAI47_14490	0.84	+0.4
3,061,431	+				+2.5
3,061,431	+				+0.8
3,061,458	+				-1.5
3,061,458	+				-2.1
3,061,458	+				-0.9
3,061,458	+				-0.0
3,061,458	+				+1.2
3,061,458	+				-0.8
3,061,458	+				-0.7
3,061,459	-				-1.0
3,061,459	-				+0.4
3,061,459	-				-1.2
3,061,459	-				-1.2
3,061,459	-				+0.7
3,061,460	+				-1.9
3,061,460	+				-2.5
3,061,461	-				-0.2
3,061,461	-				-1.2
3,061,498	+				+0.9
3,061,498	+				-0.8
3,061,499	-				+1.0
3,061,537	+		IAI47_14495	0.19	-1.7
3,061,620	+		IAI47_14495	0.52	-1.9
3,061,622	+		IAI47_14495	0.53	-0.5
3,061,622	+		IAI47_14495	0.53	-1.0
3,061,632	+		IAI47_14495	0.57	+0.3
3,061,633	-		IAI47_14495	0.58	+0.7
3,061,681	+		IAI47_14495	0.77	-1.0
3,061,682	-		IAI47_14495	0.78	-0.6
3,061,682	-		IAI47_14495	0.78	-0.9
3,061,726	+				-2.2
3,061,726	+				+0.5
3,061,726	+				+4.1
3,061,726	+				+1.4
3,061,727	-				-1.8
3,061,727	-				-0.0
3,061,730	+				+1.7
3,061,731	-				-0.2
3,061,731	-				+2.5
3,061,734	+				+0.8
3,061,734	+				-1.0
3,061,734	+				+2.6
3,061,735	-				-2.0
3,061,735	-				+1.0
3,061,735	-				+0.4
3,061,735	-				-0.7
3,061,735	-				-0.7
3,061,800	+		IAI47_14500	0.36	-1.5
3,061,850	-		IAI47_14500	0.69	+0.7
3,061,895	+				+0.3
3,061,895	+				-0.9
3,061,932	+				-1.0
3,061,932	+				-1.1
3,061,932	+				+1.3
3,061,933	-				-1.3
3,061,933	-				-2.2
3,061,933	-				-1.3
3,061,972	+		IAI47_14505	0.12	-1.2
3,061,973	-		IAI47_14505	0.12	+1.1
3,061,973	-		IAI47_14505	0.12	-0.1
3,062,013	+		IAI47_14505	0.19	-1.0
3,062,013	+		IAI47_14505	0.19	-0.5
3,062,013	+		IAI47_14505	0.19	-0.5
3,062,014	-		IAI47_14505	0.19	-0.7
3,062,014	-		IAI47_14505	0.19	-2.1
3,062,014	-		IAI47_14505	0.19	+0.8
3,062,014	-		IAI47_14505	0.19	-1.0
3,062,024	+		IAI47_14505	0.20	+0.5
3,062,024	+		IAI47_14505	0.20	-2.2
3,062,035	-		IAI47_14505	0.22	-1.9
3,062,116	-		IAI47_14505	0.35	+1.8
3,062,120	+		IAI47_14505	0.35	-1.9
3,062,120	+		IAI47_14505	0.35	+0.7
3,062,120	+		IAI47_14505	0.35	+0.1
3,062,120	+		IAI47_14505	0.35	-1.8
3,062,121	-		IAI47_14505	0.36	-1.2
3,062,121	-		IAI47_14505	0.36	-1.5
3,062,121	-		IAI47_14505	0.36	+0.6
3,062,134	+		IAI47_14505	0.38	+0.4
3,062,134	+		IAI47_14505	0.38	-2.4
3,062,135	-		IAI47_14505	0.38	-2.2
3,062,148	+		IAI47_14505	0.40	-0.9
3,062,148	+		IAI47_14505	0.40	-1.5
3,062,148	+		IAI47_14505	0.40	-2.9
3,062,148	+		IAI47_14505	0.40	-0.7
3,062,149	-		IAI47_14505	0.40	-2.3
3,062,149	-		IAI47_14505	0.40	+2.0
3,062,149	-		IAI47_14505	0.40	-2.9
3,062,187	+		IAI47_14505	0.46	+0.6
3,062,188	-		IAI47_14505	0.46	+1.2
3,062,247	+		IAI47_14505	0.55	-2.6
3,062,247	+		IAI47_14505	0.55	-1.0
3,062,247	+		IAI47_14505	0.55	-0.9
3,062,248	-		IAI47_14505	0.55	+0.3
3,062,248	-		IAI47_14505	0.55	+1.9
3,062,249	+		IAI47_14505	0.56	-1.4
3,062,249	+		IAI47_14505	0.56	+1.2
3,062,249	+		IAI47_14505	0.56	-1.7
3,062,249	+		IAI47_14505	0.56	-1.0
3,062,249	+		IAI47_14505	0.56	+0.8
3,062,250	-		IAI47_14505	0.56	-1.6
3,062,291	+		IAI47_14505	0.62	-1.8
3,062,292	-		IAI47_14505	0.62	+0.4
3,062,292	-		IAI47_14505	0.62	+2.1
3,062,347	+		IAI47_14505	0.71	+0.1
3,062,347	+		IAI47_14505	0.71	-1.7
3,062,348	-		IAI47_14505	0.71	-2.5
3,062,348	-		IAI47_14505	0.71	-0.9
3,062,348	-		IAI47_14505	0.71	+0.9
3,062,356	+		IAI47_14505	0.72	+0.4
3,062,357	-		IAI47_14505	0.72	-2.3
3,062,357	-		IAI47_14505	0.72	-1.3
3,062,357	-		IAI47_14505	0.72	-0.9
3,062,359	+		IAI47_14505	0.73	+1.4
3,062,359	+		IAI47_14505	0.73	-1.1
3,062,359	+		IAI47_14505	0.73	+0.0
3,062,359	+		IAI47_14505	0.73	-1.8
3,062,360	-		IAI47_14505	0.73	-0.3
3,062,360	-		IAI47_14505	0.73	-0.5
3,062,360	-		IAI47_14505	0.73	-2.8
3,062,360	-		IAI47_14505	0.73	-0.9
3,062,360	-		IAI47_14505	0.73	+1.3
3,062,360	-		IAI47_14505	0.73	-0.3
3,062,387	+		IAI47_14505	0.77	+0.5
3,062,387	+		IAI47_14505	0.77	-2.3
3,062,388	-		IAI47_14505	0.77	+0.6
3,062,403	+		IAI47_14505	0.80	+0.2
3,062,424	+		IAI47_14505	0.83	+0.4
3,062,424	+		IAI47_14505	0.83	-0.9
3,062,425	-		IAI47_14505	0.83	-1.6
3,062,425	-		IAI47_14505	0.83	-0.7
3,062,532	+				+0.9
3,062,533	-				+0.2
3,062,533	-				+0.2
3,062,556	+				-1.0
3,062,562	+				+1.4
3,062,563	-				+1.3
3,062,563	-				-0.5
3,062,566	+				-0.3
3,062,580	+				-1.7
3,062,580	+				-0.7
3,062,585	-				+0.9
3,062,589	+				+0.9
3,062,589	+				+1.3
3,062,590	-				+0.1
3,062,590	-				-0.1
3,062,663	-				+0.4
3,062,671	-				+1.0
3,062,694	+				-0.6