Strain Fitness in Pantoea sp. MT58 around IAI47_14460

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,053,574	-				+1.3
3,053,580	+				-1.6
3,053,581	-				+0.1
3,053,581	-				+0.0
3,053,602	-				+0.6
3,053,611	+				-2.0
3,053,611	+				+0.6
3,053,612	-				-0.1
3,053,617	-				+0.7
3,053,629	+				-1.3
3,053,630	-				-0.8
3,053,648	+				-1.7
3,053,649	-				+0.3
3,053,649	-				-0.7
3,053,686	+				-2.3
3,053,687	-				+0.5
3,053,705	+				+2.0
3,053,705	+				-1.9
3,053,705	+				-0.6
3,053,705	+				-0.6
3,053,705	+				-2.1
3,053,705	+				+0.3
3,053,705	+				+0.1
3,053,706	-				+1.4
3,053,706	-				+1.9
3,053,706	-				-0.4
3,053,718	+				-0.1
3,053,718	+				-0.4
3,053,719	-				-1.2
3,053,719	-				-1.4
3,053,719	-				-2.0
3,053,796	+		IAI47_14455	0.16	-1.3
3,053,814	+		IAI47_14455	0.19	-0.1
3,053,889	-		IAI47_14455	0.27	+0.6
3,053,908	-		IAI47_14455	0.29	+0.7
3,053,996	-		IAI47_14455	0.39	+1.1
3,053,996	-		IAI47_14455	0.39	+2.1
3,054,005	-		IAI47_14455	0.40	-3.2
3,054,074	+		IAI47_14455	0.48	-0.6
3,054,074	+		IAI47_14455	0.48	+0.8
3,054,074	+		IAI47_14455	0.48	-0.9
3,054,074	+		IAI47_14455	0.48	-0.5
3,054,074	+		IAI47_14455	0.48	-0.3
3,054,074	+		IAI47_14455	0.48	-0.7
3,054,075	+		IAI47_14455	0.49	-0.3
3,054,075	-		IAI47_14455	0.49	-1.9
3,054,075	-		IAI47_14455	0.49	-0.9
3,054,075	-		IAI47_14455	0.49	+0.9
3,054,075	-		IAI47_14455	0.49	+0.1
3,054,075	-		IAI47_14455	0.49	-2.6
3,054,075	-		IAI47_14455	0.49	-1.0
3,054,075	-		IAI47_14455	0.49	+1.9
3,054,075	-		IAI47_14455	0.49	+0.4
3,054,075	-		IAI47_14455	0.49	-1.4
3,054,200	+		IAI47_14455	0.63	-2.7
3,054,201	-		IAI47_14455	0.63	+1.1
3,054,201	-		IAI47_14455	0.63	-2.2
3,054,201	-		IAI47_14455	0.63	-0.1
3,054,201	-		IAI47_14455	0.63	-0.6
3,054,282	+		IAI47_14455	0.72	-0.4
3,054,282	+		IAI47_14455	0.72	-0.1
3,054,283	-		IAI47_14455	0.72	-0.6
3,054,472	-				-2.3
3,054,472	-				+0.5
3,054,472	-				+0.2
3,054,520	+				+1.3
3,054,520	+				-0.9
3,054,520	+				-1.1
3,054,520	+				+2.2
3,054,520	+				+0.6
3,054,520	+				+0.6
3,054,521	-				+0.1
3,054,536	+				-1.6
3,054,537	-				-0.9
3,054,537	-				+1.1
3,054,557	+				+0.8
3,054,558	-				-1.4
3,054,588	+				-0.7
3,054,589	-				+0.8
3,054,684	+				+0.5
3,054,734	+				-0.4
3,054,734	+				-2.1
3,054,735	-				+1.8
3,054,735	-				+0.4
3,054,735	-				+2.3
3,054,735	-				+2.6
3,054,999	+		IAI47_14460	0.24	+1.6
3,055,000	-		IAI47_14460	0.24	-1.0
3,055,019	+		IAI47_14460	0.25	+0.6
3,055,019	+		IAI47_14460	0.25	+1.3
3,055,019	+		IAI47_14460	0.25	+1.6
3,055,020	-		IAI47_14460	0.25	+2.1
3,055,020	-		IAI47_14460	0.25	+2.2
3,055,020	-		IAI47_14460	0.25	-2.4
3,055,118	+		IAI47_14460	0.30	+1.2
3,055,118	+		IAI47_14460	0.30	+1.2
3,055,118	+		IAI47_14460	0.30	-0.9
3,055,118	+		IAI47_14460	0.30	+1.8
3,055,118	+		IAI47_14460	0.30	+0.4
3,055,118	+		IAI47_14460	0.30	+1.8
3,055,118	+		IAI47_14460	0.30	+1.7
3,055,119	-		IAI47_14460	0.30	+1.1
3,055,119	-		IAI47_14460	0.30	-1.1
3,055,119	-		IAI47_14460	0.30	+0.7
3,055,119	-		IAI47_14460	0.30	+0.1
3,055,119	-		IAI47_14460	0.30	-0.2
3,055,119	-		IAI47_14460	0.30	+0.8
3,055,136	+		IAI47_14460	0.31	-1.4
3,055,136	+		IAI47_14460	0.31	+0.1
3,055,136	+		IAI47_14460	0.31	-0.4
3,055,137	-		IAI47_14460	0.31	-0.1
3,055,137	-		IAI47_14460	0.31	+0.9
3,055,137	-		IAI47_14460	0.31	-1.8
3,055,137	-		IAI47_14460	0.31	+0.7
3,055,139	+		IAI47_14460	0.31	+1.3
3,055,175	+		IAI47_14460	0.33	-0.4
3,055,175	+		IAI47_14460	0.33	-0.4
3,055,176	-		IAI47_14460	0.33	-1.6
3,055,176	-		IAI47_14460	0.33	+1.3
3,055,176	-		IAI47_14460	0.33	+1.4
3,055,176	-		IAI47_14460	0.33	+0.3
3,055,264	-		IAI47_14460	0.38	+0.7
3,055,264	-		IAI47_14460	0.38	+1.5
3,055,320	-		IAI47_14460	0.41	+1.7
3,055,366	-		IAI47_14460	0.43	+1.3
3,055,481	+		IAI47_14460	0.49	+3.7
3,055,481	+		IAI47_14460	0.49	+0.1
3,055,481	+		IAI47_14460	0.49	+0.8
3,055,482	-		IAI47_14460	0.49	+1.1
3,055,482	-		IAI47_14460	0.49	+3.5
3,055,515	+		IAI47_14460	0.51	+1.0
3,055,515	+		IAI47_14460	0.51	+2.0
3,055,516	-		IAI47_14460	0.51	-0.9
3,055,516	-		IAI47_14460	0.51	+1.5
3,055,532	+		IAI47_14460	0.52	+0.4
3,055,532	+		IAI47_14460	0.52	+0.1
3,055,533	-		IAI47_14460	0.52	+0.8
3,055,533	-		IAI47_14460	0.52	+0.6
3,055,569	+		IAI47_14460	0.54	+0.3
3,055,569	+		IAI47_14460	0.54	+2.1
3,055,570	-		IAI47_14460	0.54	-2.2
3,055,570	-		IAI47_14460	0.54	-0.8
3,055,570	-		IAI47_14460	0.54	+0.7
3,055,570	-		IAI47_14460	0.54	+1.1
3,055,570	-		IAI47_14460	0.54	-1.6
3,055,595	+		IAI47_14460	0.55	-0.1
3,055,595	+		IAI47_14460	0.55	-0.4
3,055,595	+		IAI47_14460	0.55	-0.6
3,055,596	-		IAI47_14460	0.55	+1.0
3,055,596	-		IAI47_14460	0.55	-0.3
3,055,596	-		IAI47_14460	0.55	+0.4
3,055,610	+		IAI47_14460	0.56	+0.8
3,055,610	+		IAI47_14460	0.56	-1.2
3,055,611	-		IAI47_14460	0.56	+1.5
3,055,611	-		IAI47_14460	0.56	-0.0
3,055,611	-		IAI47_14460	0.56	+0.9
3,055,620	+		IAI47_14460	0.57	-1.0
3,055,620	+		IAI47_14460	0.57	+0.3
3,055,621	-		IAI47_14460	0.57	+2.7
3,055,621	-		IAI47_14460	0.57	+0.8
3,055,621	-		IAI47_14460	0.57	-0.9
3,055,661	+		IAI47_14460	0.59	+1.0
3,055,661	+		IAI47_14460	0.59	+1.7
3,055,662	-		IAI47_14460	0.59	-2.2
3,055,662	-		IAI47_14460	0.59	+0.7
3,055,662	-		IAI47_14460	0.59	+2.6
3,055,662	-		IAI47_14460	0.59	-0.1
3,055,674	+		IAI47_14460	0.60	-0.3
3,055,674	+		IAI47_14460	0.60	+0.3
3,055,674	+		IAI47_14460	0.60	-1.7
3,055,675	-		IAI47_14460	0.60	-0.0
3,055,675	-		IAI47_14460	0.60	-0.1
3,055,682	+		IAI47_14460	0.60	-1.4
3,055,683	-		IAI47_14460	0.60	+0.0
3,055,683	-		IAI47_14460	0.60	+0.3
3,055,695	-		IAI47_14460	0.61	+0.3
3,055,826	+		IAI47_14460	0.68	-0.1
3,055,826	+		IAI47_14460	0.68	+0.2
3,055,826	+		IAI47_14460	0.68	+0.9
3,055,826	+		IAI47_14460	0.68	+0.2
3,055,905	+		IAI47_14460	0.72	+0.9
3,055,938	+		IAI47_14460	0.74	+1.1
3,055,938	+		IAI47_14460	0.74	-0.7
3,055,938	+		IAI47_14460	0.74	+0.9
3,055,938	+		IAI47_14460	0.74	+2.1
3,055,938	+		IAI47_14460	0.74	-0.3
3,055,938	+		IAI47_14460	0.74	+1.6
3,055,939	-		IAI47_14460	0.74	-0.3
3,055,939	-		IAI47_14460	0.74	+1.9
3,055,939	-		IAI47_14460	0.74	+0.8
3,055,939	-		IAI47_14460	0.74	-0.5
3,055,939	-		IAI47_14460	0.74	+0.2
3,055,939	-		IAI47_14460	0.74	-0.8
3,055,939	-		IAI47_14460	0.74	-2.4
3,055,940	+		IAI47_14460	0.74	-0.3
3,055,940	+		IAI47_14460	0.74	+0.1
3,055,940	+		IAI47_14460	0.74	+0.5
3,055,940	+		IAI47_14460	0.74	+0.9
3,055,940	+		IAI47_14460	0.74	-0.3
3,055,940	+		IAI47_14460	0.74	+0.0
3,055,940	+		IAI47_14460	0.74	+0.1
3,055,941	-		IAI47_14460	0.74	+0.2
3,055,941	-		IAI47_14460	0.74	+0.6
3,055,941	-		IAI47_14460	0.74	-0.2
3,056,019	+		IAI47_14460	0.78	+3.5
3,056,019	+		IAI47_14460	0.78	+0.3
3,056,020	-		IAI47_14460	0.78	+1.8
3,056,020	-		IAI47_14460	0.78	+1.2
3,056,020	-		IAI47_14460	0.78	+2.6
3,056,031	+		IAI47_14460	0.79	+0.9
3,056,031	+		IAI47_14460	0.79	-1.3
3,056,042	+		IAI47_14460	0.79	+1.0
3,056,042	+		IAI47_14460	0.79	+3.0
3,056,043	-		IAI47_14460	0.79	+1.1
3,056,043	-		IAI47_14460	0.79	-1.0
3,056,043	-		IAI47_14460	0.79	+1.0
3,056,043	-		IAI47_14460	0.79	+0.5
3,056,173	-		IAI47_14460	0.86	+2.4
3,056,179	-		IAI47_14460	0.87	-1.5
3,056,203	-		IAI47_14460	0.88	-1.1
3,056,203	-		IAI47_14460	0.88	+1.9
3,056,214	+		IAI47_14460	0.88	+0.5
3,056,215	-		IAI47_14460	0.88	-0.4
3,056,254	+				+0.5
3,056,255	+				+2.4
3,056,255	+				-1.7
3,056,255	+				-1.4
3,056,255	+				-1.5
3,056,256	-				-0.7
3,056,256	-				-1.6
3,056,256	-				+0.5
3,056,256	-				+0.3
3,056,351	+				-0.3
3,056,351	+				+0.5
3,056,386	+				+0.0
3,056,386	+				+0.1
3,056,387	-				-1.7
3,056,387	-				+0.6
3,056,435	-				+1.8
3,056,532	+				+1.3
3,056,532	+				+2.7
3,056,647	-		IAI47_14465	0.19	+0.3
3,056,670	+		IAI47_14465	0.23	-0.6
3,056,670	+		IAI47_14465	0.23	-0.4
3,056,670	+		IAI47_14465	0.23	+2.7
3,056,670	+		IAI47_14465	0.23	+1.5
3,056,670	+		IAI47_14465	0.23	+0.2
3,056,671	-		IAI47_14465	0.23	-1.9
3,056,671	-		IAI47_14465	0.23	-0.9
3,056,671	-		IAI47_14465	0.23	-1.6
3,056,671	-		IAI47_14465	0.23	+2.4
3,056,772	+		IAI47_14465	0.40	+0.3
3,056,823	+		IAI47_14465	0.48	-2.8
3,056,824	-		IAI47_14465	0.48	-0.8
3,056,824	-		IAI47_14465	0.48	+0.1
3,056,863	+		IAI47_14465	0.55	+0.7
3,056,864	-		IAI47_14465	0.55	+3.6
3,056,864	-		IAI47_14465	0.55	-1.1
3,056,864	-		IAI47_14465	0.55	+0.1
3,057,016	+		IAI47_14465	0.80	-0.2
3,057,016	+		IAI47_14465	0.80	-2.3
3,057,017	-		IAI47_14465	0.80	-1.2
3,057,017	-		IAI47_14465	0.80	-1.1
3,057,151	-				-1.9
3,057,151	-				+0.8
3,057,264	+		IAI47_14470	0.38	+1.7
3,057,264	+		IAI47_14470	0.38	-1.8
3,057,265	-		IAI47_14470	0.39	-1.7
3,057,265	-		IAI47_14470	0.39	+0.7
3,057,265	-		IAI47_14470	0.39	+0.1
3,057,265	-		IAI47_14470	0.39	-1.3
3,057,265	-		IAI47_14470	0.39	-0.7