Strain Fitness in Pantoea sp. MT58 around IAI47_12485

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,629,552	+				+1.1
2,629,552	+				+3.1
2,629,552	+				-1.1
2,629,553	-				+0.3
2,629,553	-				-1.8
2,629,553	-				-0.9
2,629,553	-				-0.3
2,629,553	-				+3.4
2,629,553	-				-1.9
2,629,652	+		IAI47_12475	0.42	-1.9
2,629,652	+		IAI47_12475	0.42	+3.2
2,629,652	+		IAI47_12475	0.42	+1.2
2,629,652	+		IAI47_12475	0.42	-0.9
2,629,653	-		IAI47_12475	0.43	-1.2
2,629,653	-		IAI47_12475	0.43	-1.4
2,629,653	-		IAI47_12475	0.43	-2.7
2,629,653	-				-0.2
2,629,653	-		IAI47_12475	0.43	+0.8
2,629,698	+		IAI47_12475	0.63	-0.4
2,629,698	+		IAI47_12475	0.63	+1.2
2,629,698	+		IAI47_12475	0.63	-0.4
2,629,699	-		IAI47_12475	0.63	+0.9
2,629,699	-		IAI47_12475	0.63	+0.2
2,629,699	-		IAI47_12475	0.63	+1.9
2,629,699	-		IAI47_12475	0.63	-0.4
2,629,699	-		IAI47_12475	0.63	+2.0
2,629,702	+		IAI47_12475	0.64	+0.2
2,629,702	+		IAI47_12475	0.64	-0.0
2,629,702	+		IAI47_12475	0.64	-1.7
2,629,702	+		IAI47_12475	0.64	-1.6
2,629,703	-		IAI47_12475	0.65	-0.2
2,629,703	-		IAI47_12475	0.65	+0.1
2,629,703	-		IAI47_12475	0.65	-1.6
2,629,703	-		IAI47_12475	0.65	-0.6
2,629,703	-		IAI47_12475	0.65	+0.5
2,629,751	+		IAI47_12475	0.86	-0.4
2,629,752	-		IAI47_12475	0.87	-1.1
2,629,761	-				+1.4
2,629,761	-				+0.2
2,629,761	-				-0.5
2,629,808	+				+2.2
2,629,808	+				+0.9
2,629,808	+				-1.9
2,629,809	-				+1.0
2,629,809	-				+0.9
2,629,809	-				-2.1
2,629,809	-				+0.7
2,629,809	-				-0.6
2,629,809	-				+2.3
2,629,810	+				-0.2
2,629,810	+				+1.5
2,629,810	+				-1.1
2,629,810	+				+1.8
2,629,810	+				-1.5
2,629,810	+				+0.7
2,629,810	+				+1.5
2,629,810	+				+1.0
2,629,810	+				-0.1
2,629,810	+				+0.0
2,629,811	-				+1.6
2,629,811	-				-0.3
2,629,811	-				+0.1
2,629,811	-				+0.6
2,629,811	-				+0.9
2,629,811	-				-0.2
2,629,811	-				+3.0
2,629,811	-				-1.7
2,629,811	-				+2.9
2,629,811	-				-1.9
2,629,811	-				+1.3
2,629,811	-				+3.7
2,629,815	+				+1.4
2,629,816	-				-1.8
2,629,859	+				-1.5
2,629,860	-				-0.4
2,629,893	+		IAI47_12480	0.13	-0.2
2,629,893	+		IAI47_12480	0.13	-2.0
2,629,894	-		IAI47_12480	0.13	+0.2
2,629,894	-		IAI47_12480	0.13	-0.2
2,629,894	-		IAI47_12480	0.13	+0.2
2,629,946	-		IAI47_12480	0.22	-2.7
2,629,946	-		IAI47_12480	0.22	-1.5
2,629,960	+		IAI47_12480	0.24	-0.4
2,629,960	+		IAI47_12480	0.24	-1.9
2,629,960	+		IAI47_12480	0.24	-2.6
2,629,960	+		IAI47_12480	0.24	-1.0
2,629,960	+		IAI47_12480	0.24	-2.7
2,629,960	+		IAI47_12480	0.24	-1.5
2,629,960	+		IAI47_12480	0.24	-2.0
2,629,961	-		IAI47_12480	0.24	-2.7
2,629,961	-		IAI47_12480	0.24	-1.2
2,629,961	-		IAI47_12480	0.24	+0.4
2,629,961	-		IAI47_12480	0.24	+0.8
2,629,973	-		IAI47_12480	0.26	-1.4
2,629,983	+		IAI47_12480	0.28	-1.0
2,629,983	+		IAI47_12480	0.28	+0.4
2,629,983	+		IAI47_12480	0.28	-2.4
2,629,984	-		IAI47_12480	0.28	-1.6
2,629,984	-		IAI47_12480	0.28	-0.5
2,629,984	-		IAI47_12480	0.28	+1.1
2,629,984	-		IAI47_12480	0.28	-0.1
2,629,984	-		IAI47_12480	0.28	-1.4
2,629,984	-		IAI47_12480	0.28	-0.5
2,629,984	-		IAI47_12480	0.28	-0.7
2,630,035	+		IAI47_12480	0.36	-1.4
2,630,035	+		IAI47_12480	0.36	-1.1
2,630,035	+		IAI47_12480	0.36	-0.9
2,630,035	+		IAI47_12480	0.36	-2.2
2,630,035	+		IAI47_12480	0.36	-0.7
2,630,035	+		IAI47_12480	0.36	-1.4
2,630,035	+		IAI47_12480	0.36	-1.4
2,630,035	+		IAI47_12480	0.36	-0.9
2,630,036	-		IAI47_12480	0.36	-1.6
2,630,036	-		IAI47_12480	0.36	-0.9
2,630,036	-		IAI47_12480	0.36	-1.6
2,630,036	-		IAI47_12480	0.36	-2.2
2,630,036	-		IAI47_12480	0.36	-1.7
2,630,036	-		IAI47_12480	0.36	-2.1
2,630,036	-		IAI47_12480	0.36	-1.5
2,630,036	-		IAI47_12480	0.36	-0.3
2,630,043	+		IAI47_12480	0.37	-0.9
2,630,043	+		IAI47_12480	0.37	-0.7
2,630,043	+		IAI47_12480	0.37	-1.3
2,630,043	+		IAI47_12480	0.37	-1.7
2,630,043	+		IAI47_12480	0.37	-1.6
2,630,043	+		IAI47_12480	0.37	-1.7
2,630,043	+		IAI47_12480	0.37	-2.6
2,630,044	-		IAI47_12480	0.38	-2.4
2,630,044	-		IAI47_12480	0.38	-2.6
2,630,044	-		IAI47_12480	0.38	-1.5
2,630,044	-		IAI47_12480	0.38	-2.7
2,630,044	-		IAI47_12480	0.38	-0.2
2,630,044	-		IAI47_12480	0.38	-2.9
2,630,044	-		IAI47_12480	0.38	-1.6
2,630,044	-		IAI47_12480	0.38	-1.7
2,630,280	+		IAI47_12480	0.76	+0.3
2,630,280	+		IAI47_12480	0.76	-4.4
2,630,281	-		IAI47_12480	0.76	-2.5
2,630,289	+		IAI47_12480	0.78	-1.5
2,630,290	-		IAI47_12480	0.78	-1.4
2,630,290	-		IAI47_12480	0.78	-1.4
2,630,290	-		IAI47_12480	0.78	+0.3
2,630,290	-		IAI47_12480	0.78	-0.7
2,630,290	-		IAI47_12480	0.78	+0.3
2,630,290	-		IAI47_12480	0.78	-2.7
2,630,355	+		IAI47_12480	0.88	+0.1
2,630,356	-		IAI47_12480	0.89	-1.6
2,630,361	+		IAI47_12480	0.89	+1.5
2,630,362	-		IAI47_12480	0.90	-0.2
2,630,395	+				-1.7
2,630,395	+				-3.1
2,630,395	+				-1.7
2,630,396	+				-1.3
2,630,396	-				-1.6
2,630,396	-				-1.9
2,630,396	-				-0.4
2,630,402	+				-1.4
2,630,402	+				-2.1
2,630,403	-				-2.5
2,630,403	-				-0.6
2,630,403	-				-3.0
2,630,403	-				-1.2
2,630,418	-				-2.7
2,630,418	-				-0.2
2,630,451	+				-1.8
2,630,496	+				-1.9
2,630,511	+				-1.7
2,630,512	-				+0.9
2,630,512	-				+0.8
2,630,512	-				+0.6
2,630,512	-				-0.4
2,630,532	-				-0.5
2,630,543	+				-2.3
2,630,543	+				+1.4
2,630,573	+				+1.1
2,630,573	+				+1.6
2,630,574	-				-0.5
2,630,574	-				-0.7
2,630,643	+		IAI47_12485	0.13	-0.2
2,630,643	+		IAI47_12485	0.13	-1.4
2,630,644	-		IAI47_12485	0.13	-2.9
2,630,644	-		IAI47_12485	0.13	-0.4
2,630,644	-		IAI47_12485	0.13	-1.7
2,630,644	-		IAI47_12485	0.13	+1.2
2,630,659	+		IAI47_12485	0.15	-1.4
2,630,664	+		IAI47_12485	0.16	-0.5
2,630,664	+		IAI47_12485	0.16	-1.8
2,630,665	-		IAI47_12485	0.16	-0.9
2,630,665	-		IAI47_12485	0.16	-0.5
2,630,730	+		IAI47_12485	0.25	-1.3
2,630,731	-		IAI47_12485	0.25	-2.7
2,630,766	+		IAI47_12485	0.30	+0.1
2,630,782	-		IAI47_12485	0.32	-1.9
2,630,791	+		IAI47_12485	0.34	+0.1
2,630,791	+		IAI47_12485	0.34	-1.1
2,630,792	-		IAI47_12485	0.34	-0.0
2,630,792	-		IAI47_12485	0.34	+1.2
2,630,792	-		IAI47_12485	0.34	+0.6
2,630,815	+		IAI47_12485	0.37	-1.4
2,630,816	-		IAI47_12485	0.37	+2.0
2,630,868	+		IAI47_12485	0.44	-0.9
2,630,868	+		IAI47_12485	0.44	-1.9
2,630,868	+		IAI47_12485	0.44	+0.5
2,630,868	+		IAI47_12485	0.44	-2.1
2,630,868	+		IAI47_12485	0.44	-0.5
2,630,868	+		IAI47_12485	0.44	-0.7
2,630,868	+		IAI47_12485	0.44	-0.4
2,630,868	+		IAI47_12485	0.44	-0.2
2,630,868	+		IAI47_12485	0.44	-0.9
2,630,868	+		IAI47_12485	0.44	-1.4
2,630,868	+		IAI47_12485	0.44	-0.7
2,630,868	+		IAI47_12485	0.44	-0.8
2,630,868	+		IAI47_12485	0.44	-0.2
2,630,868	+		IAI47_12485	0.44	-0.2
2,630,868	+		IAI47_12485	0.44	-1.9
2,630,869	-		IAI47_12485	0.44	-0.7
2,630,869	-		IAI47_12485	0.44	-0.2
2,630,869	-		IAI47_12485	0.44	-1.2
2,630,869	-		IAI47_12485	0.44	+1.6
2,630,869	-		IAI47_12485	0.44	-0.6
2,630,869	-		IAI47_12485	0.44	+0.1
2,630,869	-		IAI47_12485	0.44	-0.6
2,630,869	-		IAI47_12485	0.44	-1.2
2,630,869	-		IAI47_12485	0.44	-0.8
2,630,869	-		IAI47_12485	0.44	-0.4
2,630,872	+		IAI47_12485	0.45	-1.7
2,630,872	+		IAI47_12485	0.45	-2.3
2,630,872	+		IAI47_12485	0.45	-1.2
2,630,872	+		IAI47_12485	0.45	-0.2
2,630,872	+		IAI47_12485	0.45	-2.3
2,630,872	+		IAI47_12485	0.45	-1.5
2,630,872	+		IAI47_12485	0.45	-1.5
2,630,872	+		IAI47_12485	0.45	-0.5
2,630,872	+		IAI47_12485	0.45	-1.6
2,630,872	+		IAI47_12485	0.45	-3.4
2,630,872	+		IAI47_12485	0.45	-1.2
2,630,872	+		IAI47_12485	0.45	-1.5
2,630,872	+		IAI47_12485	0.45	-1.5
2,630,872	+		IAI47_12485	0.45	-0.8
2,630,873	-		IAI47_12485	0.45	+0.5
2,630,873	-		IAI47_12485	0.45	-2.3
2,630,873	-		IAI47_12485	0.45	-3.3
2,630,873	-		IAI47_12485	0.45	-0.9
2,630,873	-		IAI47_12485	0.45	-1.6
2,630,873	-		IAI47_12485	0.45	-1.3
2,630,873	-		IAI47_12485	0.45	-1.6
2,630,873	-		IAI47_12485	0.45	-1.1
2,630,873	-		IAI47_12485	0.45	+0.4
2,630,873	-		IAI47_12485	0.45	-0.1
2,630,873	-		IAI47_12485	0.45	-2.6
2,630,875	+		IAI47_12485	0.45	-2.2
2,630,875	+		IAI47_12485	0.45	-0.4
2,630,875	+		IAI47_12485	0.45	-1.7
2,630,875	+		IAI47_12485	0.45	-0.3
2,630,875	+		IAI47_12485	0.45	-2.1
2,630,876	-		IAI47_12485	0.45	+2.0
2,630,876	-		IAI47_12485	0.45	+1.6
2,630,877	+		IAI47_12485	0.46	-0.7
2,630,877	+		IAI47_12485	0.46	+0.6
2,630,877	+		IAI47_12485	0.46	-2.6
2,630,878	-		IAI47_12485	0.46	+1.8
2,630,878	-		IAI47_12485	0.46	+0.1
2,630,878	-		IAI47_12485	0.46	+0.8
2,630,878	-		IAI47_12485	0.46	+1.0
2,630,878	-		IAI47_12485	0.46	-1.3
2,630,878	-		IAI47_12485	0.46	+1.6
2,630,933	+		IAI47_12485	0.53	+0.8
2,630,933	+		IAI47_12485	0.53	+0.6
2,630,933	+		IAI47_12485	0.53	-1.3
2,630,933	+		IAI47_12485	0.53	-0.9
2,630,934	-		IAI47_12485	0.53	+0.9
2,630,934	-		IAI47_12485	0.53	-0.6
2,630,934	-		IAI47_12485	0.53	-2.1
2,631,073	+		IAI47_12485	0.73	+1.1
2,631,090	+		IAI47_12485	0.75	+0.3
2,631,090	+		IAI47_12485	0.75	-1.0
2,631,090	+		IAI47_12485	0.75	-0.7
2,631,091	-		IAI47_12485	0.75	+1.4
2,631,150	-		IAI47_12485	0.83	+1.8
2,631,160	+		IAI47_12485	0.85	-1.2
2,631,161	-		IAI47_12485	0.85	-2.2
2,631,161	-		IAI47_12485	0.85	-0.7
2,631,184	+		IAI47_12485	0.88	-1.5
2,631,184	+		IAI47_12485	0.88	-0.9
2,631,184	+		IAI47_12485	0.88	-1.6
2,631,211	+				+1.4
2,631,212	-				-2.5
2,631,270	+				-1.2
2,631,271	-				-0.7
2,631,309	-				+2.1
2,631,334	+				-1.8
2,631,335	-				+1.1
2,631,344	+				+1.2
2,631,442	+				-0.7
2,631,442	+				-0.9
2,631,443	-				+0.6
2,631,486	-				-0.0
2,631,486	-				+0.6
2,631,533	-				-0.1
2,631,569	-				-1.7
2,631,612	-				+2.6
2,631,624	+				+0.7
2,631,624	+				+3.4
2,631,683	+				+0.9
2,631,684	-				-1.1
2,631,687	+				-1.2
2,631,687	+				-0.9
2,631,687	+				-1.3
2,631,698	+				-1.7
2,631,722	+				+1.9
2,631,722	+				-1.2
2,631,722	+				-0.5
2,631,722	+				-0.5
2,631,722	+				-1.2
2,631,722	+				+0.9
2,631,722	+				-2.2
2,631,722	+				+0.4
2,631,722	+				-0.2
2,631,722	+				-1.6
2,631,722	+				+0.6
2,631,722	+				+1.4
2,631,722	+				-0.5
2,631,723	-				+0.4
2,631,723	-				+0.8
2,631,723	-				+0.3
2,631,736	-				-1.2
2,631,772	+				-1.7
2,631,773	-				+2.2
2,631,773	-				+0.6
2,631,773	-				+0.5
2,631,798	+				+0.8
2,631,798	+				+1.3
2,631,798	+				+1.1
2,631,798	+				+1.9
2,631,798	+				-0.2
2,631,798	+				-1.4
2,631,798	+				+0.3
2,631,798	+				+3.1
2,631,798	+				-0.9
2,631,798	+				-1.2
2,631,798	+				-0.9
2,631,799	-				-0.4
2,631,799	-				+1.5
2,631,799	-				-1.4
2,631,799	-				-1.3
2,631,799	-				-0.7
2,631,799	-				+0.6
2,631,799	-				+1.9
2,631,799	-				+2.0
2,631,845	-				+0.6
2,631,845	-				+2.8
2,631,847	+				+0.6
2,631,847	+				-0.8
2,631,847	+				+2.9
2,631,847	+				+0.9
2,631,847	+				+0.8
2,631,847	+				+0.9
2,631,848	-				+2.6
2,631,848	-				-3.1
2,631,879	+				-0.5
2,631,879	+				+0.2
2,631,920	+				-0.7
2,631,933	+				-0.6
2,631,933	+				+0.7
2,631,979	+				-0.2
2,631,980	-				+1.2
2,631,980	-				+1.1
2,631,985	+				+1.6
2,631,986	-				+0.7
2,631,986	-				+1.6
2,631,988	-				-0.6
2,632,000	+				+0.8
2,632,004	+				+0.6
2,632,004	+				+0.7
2,632,004	+				+1.1
2,632,005	-				-1.4
2,632,005	-				+0.3
2,632,005	-				-0.8
2,632,005	-				+2.1
2,632,005	-				-0.4
2,632,006	+				-0.8
2,632,006	+				+1.4
2,632,006	+				+1.6
2,632,007	-				+0.3
2,632,007	-				-1.7
2,632,007	-				+0.9
2,632,015	+				-0.8
2,632,015	+				+0.2
2,632,015	+				-0.7
2,632,016	-				-0.2
2,632,016	-				+1.5
2,632,016	-				+0.6
2,632,016	-				+1.6
2,632,016	-				+0.3
2,632,083	+				+2.2
2,632,089	-				+0.3
2,632,095	-				+1.1
2,632,122	-				+1.0
2,632,134	+				+0.7
2,632,135	-				-0.1
2,632,137	+				-0.7
2,632,137	+				-0.4
2,632,138	-				-1.8
2,632,140	+				+1.0
2,632,141	-				-1.1
2,632,153	-				+0.7
2,632,159	-				-0.5
2,632,159	-				+1.6
2,632,182	+				+0.1
2,632,182	+				-0.5
2,632,183	-				+0.1
2,632,197	+				-1.7
2,632,198	-				-0.4
2,632,232	+				-1.4
2,632,233	-				-2.1
2,632,233	-				+0.4
2,632,247	-				+6.4
2,632,261	+				+0.2
2,632,261	+				-1.0
2,632,262	-				-1.8