Strain Fitness in Pantoea sp. MT58 around IAI47_12140

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,570,848	-		IAI47_12130	0.83	-2.0
2,570,851	-		IAI47_12130	0.84	+1.0
2,570,851	-		IAI47_12130	0.84	+1.5
2,570,851	-		IAI47_12130	0.84	-1.1
2,570,948	-				+3.2
2,570,948	-				+1.2
2,571,023	-				+2.2
2,571,044	+				-1.2
2,571,044	+				+0.0
2,571,044	+				+1.4
2,571,045	-				-0.6
2,571,045	-				+0.4
2,571,045	-				+0.5
2,571,045	-				+1.3
2,571,045	-				-1.5
2,571,105	+				+2.1
2,571,105	+				+1.6
2,571,105	+				+0.8
2,571,105	+				+1.2
2,571,105	+				+0.9
2,571,106	-				+1.6
2,571,106	-				+2.1
2,571,106	-				+2.1
2,571,106	-				-0.2
2,571,107	+				+1.4
2,571,107	+				+1.1
2,571,107	+				+2.2
2,571,107	+				+0.0
2,571,107	+				+1.0
2,571,107	+				+1.9
2,571,107	+				+1.5
2,571,108	-				+0.8
2,571,108	-				+0.7
2,571,108	-				+1.5
2,571,108	-				+0.7
2,571,108	-				+1.9
2,571,122	+		IAI47_12135	0.11	+1.7
2,571,122	+		IAI47_12135	0.11	+1.7
2,571,123	-		IAI47_12135	0.11	+1.4
2,571,123	-		IAI47_12135	0.11	+2.0
2,571,130	-		IAI47_12135	0.12	+1.4
2,571,130	-		IAI47_12135	0.12	+1.1
2,571,150	+		IAI47_12135	0.15	+1.5
2,571,150	+		IAI47_12135	0.15	+1.9
2,571,151	-		IAI47_12135	0.15	+1.0
2,571,151	-		IAI47_12135	0.15	+1.4
2,571,151	-		IAI47_12135	0.15	-0.5
2,571,151	-		IAI47_12135	0.15	+1.4
2,571,151	-		IAI47_12135	0.15	+1.0
2,571,154	+		IAI47_12135	0.16	+1.4
2,571,155	-		IAI47_12135	0.16	-0.6
2,571,166	-		IAI47_12135	0.17	+2.8
2,571,228	+		IAI47_12135	0.26	+1.8
2,571,259	+		IAI47_12135	0.30	+1.1
2,571,259	+		IAI47_12135	0.30	+1.1
2,571,259	+		IAI47_12135	0.30	+1.5
2,571,259	+		IAI47_12135	0.30	+2.6
2,571,259	+		IAI47_12135	0.30	+1.9
2,571,259	+		IAI47_12135	0.30	+1.4
2,571,259	+		IAI47_12135	0.30	+2.8
2,571,260	-		IAI47_12135	0.31	+1.3
2,571,260	-		IAI47_12135	0.31	+2.7
2,571,260	-		IAI47_12135	0.31	+0.5
2,571,260	-		IAI47_12135	0.31	+1.7
2,571,260	-		IAI47_12135	0.31	+1.3
2,571,260	-		IAI47_12135	0.31	+1.3
2,571,260	-		IAI47_12135	0.31	+2.8
2,571,277	+		IAI47_12135	0.33	+0.2
2,571,278	-		IAI47_12135	0.33	+0.9
2,571,278	-		IAI47_12135	0.33	-0.3
2,571,278	-		IAI47_12135	0.33	+2.6
2,571,278	-		IAI47_12135	0.33	-1.4
2,571,278	-		IAI47_12135	0.33	+2.6
2,571,298	-		IAI47_12135	0.36	+0.6
2,571,315	+		IAI47_12135	0.38	+1.9
2,571,315	+		IAI47_12135	0.38	+1.2
2,571,315	+		IAI47_12135	0.38	+2.8
2,571,316	-		IAI47_12135	0.38	+0.4
2,571,316	-		IAI47_12135	0.38	+2.2
2,571,316	-		IAI47_12135	0.38	+2.7
2,571,318	+		IAI47_12135	0.39	+2.2
2,571,318	+		IAI47_12135	0.39	+1.6
2,571,318	+		IAI47_12135	0.39	+1.7
2,571,319	-		IAI47_12135	0.39	-0.1
2,571,319	-		IAI47_12135	0.39	+1.2
2,571,339	+		IAI47_12135	0.42	+2.0
2,571,340	-		IAI47_12135	0.42	+2.2
2,571,431	-		IAI47_12135	0.55	+0.8
2,571,432	+		IAI47_12135	0.55	+1.2
2,571,432	+		IAI47_12135	0.55	+2.2
2,571,433	-		IAI47_12135	0.55	+1.4
2,571,507	+		IAI47_12135	0.65	+2.3
2,571,507	+		IAI47_12135	0.65	+0.5
2,571,507	+		IAI47_12135	0.65	+3.0
2,571,507	+		IAI47_12135	0.65	+3.0
2,571,508	-		IAI47_12135	0.65	+1.7
2,571,531	+		IAI47_12135	0.69	+1.0
2,571,569	+		IAI47_12135	0.74	+1.0
2,571,569	+		IAI47_12135	0.74	+1.0
2,571,569	+		IAI47_12135	0.74	+2.0
2,571,570	-		IAI47_12135	0.74	+1.8
2,571,570	-		IAI47_12135	0.74	+0.7
2,571,570	-		IAI47_12135	0.74	+2.4
2,571,570	-		IAI47_12135	0.74	+0.6
2,571,570	-		IAI47_12135	0.74	+2.3
2,571,573	+		IAI47_12135	0.75	+2.1
2,571,573	+		IAI47_12135	0.75	+0.9
2,571,574	-		IAI47_12135	0.75	+1.5
2,571,574	-		IAI47_12135	0.75	-1.5
2,571,574	-		IAI47_12135	0.75	+1.1
2,571,595	+		IAI47_12135	0.78	+2.6
2,571,630	+		IAI47_12135	0.83	+3.5
2,571,630	+		IAI47_12135	0.83	+0.4
2,571,631	-		IAI47_12135	0.83	+1.6
2,571,631	-		IAI47_12135	0.83	+1.9
2,571,631	-		IAI47_12135	0.83	+1.5
2,571,631	-		IAI47_12135	0.83	+0.9
2,571,631	-		IAI47_12135	0.83	+0.1
2,571,631	-		IAI47_12135	0.83	+2.4
2,571,691	-				+1.7
2,571,715	+				+0.2
2,571,767	+				+2.7
2,571,767	+				-3.0
2,571,767	+				-0.6
2,571,767	+				+0.8
2,571,767	+				+1.6
2,571,768	-				+2.7
2,571,768	-				+1.1
2,571,768	-				+0.9
2,571,768	-				+2.2
2,571,768	-				+2.0
2,571,768	-				+0.2
2,571,770	+				+2.1
2,571,770	+				+0.6
2,571,770	+				+2.2
2,571,770	+				+1.1
2,571,770	+				+0.3
2,571,770	+				+2.0
2,571,770	+				+2.6
2,571,771	-				+0.5
2,571,771	-				+1.0
2,571,771	-				+0.8
2,571,771	-				+1.5
2,571,826	+				+1.3
2,571,826	+				+0.7
2,571,920	-		IAI47_12140	0.14	+2.2
2,571,944	+		IAI47_12140	0.17	+0.8
2,571,954	-		IAI47_12140	0.18	-0.6
2,571,954	-		IAI47_12140	0.18	+2.0
2,572,062	+		IAI47_12140	0.32	+1.9
2,572,062	+		IAI47_12140	0.32	+1.5
2,572,062	+		IAI47_12140	0.32	+2.4
2,572,062	+		IAI47_12140	0.32	+0.6
2,572,078	+		IAI47_12140	0.34	+1.1
2,572,079	-		IAI47_12140	0.34	-2.0
2,572,149	+		IAI47_12140	0.43	+1.3
2,572,149	+		IAI47_12140	0.43	+2.3
2,572,149	+		IAI47_12140	0.43	+2.4
2,572,149	+		IAI47_12140	0.43	+2.4
2,572,255	-		IAI47_12140	0.56	+1.2
2,572,256	+		IAI47_12140	0.56	+1.7
2,572,256	+		IAI47_12140	0.56	+1.2
2,572,257	-		IAI47_12140	0.57	+1.2
2,572,257	-		IAI47_12140	0.57	+1.0
2,572,257	-		IAI47_12140	0.57	+1.0
2,572,257	-		IAI47_12140	0.57	+2.2
2,572,257	-		IAI47_12140	0.57	+0.2
2,572,257	-		IAI47_12140	0.57	+0.3
2,572,293	-		IAI47_12140	0.61	+1.1
2,572,314	+		IAI47_12140	0.64	+3.5
2,572,315	-		IAI47_12140	0.64	+0.5
2,572,315	-		IAI47_12140	0.64	+1.4
2,572,315	-		IAI47_12140	0.64	+2.4
2,572,353	+		IAI47_12140	0.69	+2.4
2,572,353	+		IAI47_12140	0.69	+1.8
2,572,354	-		IAI47_12140	0.69	+0.3
2,572,460	+		IAI47_12140	0.83	+0.6
2,572,461	-		IAI47_12140	0.83	+0.9
2,572,494	+		IAI47_12140	0.87	+0.8
2,572,572	+				+2.7
2,572,573	-				+2.8
2,572,573	-				+1.8
2,572,582	+				+1.4
2,572,582	+				+0.5
2,572,583	-				+0.4
2,572,603	-				+2.2
2,572,712	+		IAI47_12145	0.13	+2.1
2,572,713	-		IAI47_12145	0.13	+1.9
2,572,713	-		IAI47_12145	0.13	+2.1
2,572,755	+		IAI47_12145	0.19	+1.9
2,572,756	-		IAI47_12145	0.19	-1.0
2,572,756	-		IAI47_12145	0.19	-1.2
2,572,766	+		IAI47_12145	0.20	+1.8
2,572,766	+		IAI47_12145	0.20	+1.6
2,572,766	+		IAI47_12145	0.20	+0.4
2,572,792	-		IAI47_12145	0.24	-0.4
2,572,827	-		IAI47_12145	0.28	+1.6
2,573,057	+		IAI47_12145	0.59	+0.8
2,573,058	-		IAI47_12145	0.59	+0.2
2,573,074	+		IAI47_12145	0.61	+0.9
2,573,075	-		IAI47_12145	0.61	-0.9
2,573,075	-		IAI47_12145	0.61	+1.7
2,573,075	-		IAI47_12145	0.61	+1.5
2,573,152	+		IAI47_12145	0.71	+1.8
2,573,152	+		IAI47_12145	0.71	+3.7
2,573,152	+		IAI47_12145	0.71	-0.1
2,573,153	-		IAI47_12145	0.71	+0.6
2,573,189	+		IAI47_12145	0.76	+2.0
2,573,207	+		IAI47_12145	0.78	-0.5
2,573,208	-		IAI47_12145	0.79	-0.1
2,573,279	+		IAI47_12145	0.88	+2.1
2,573,280	-		IAI47_12145	0.88	+1.5
2,573,280	-		IAI47_12145	0.88	+1.6
2,573,351	+				+1.3
2,573,351	+				+2.1
2,573,351	+				+3.3
2,573,352	-				+2.3
2,573,352	-				+0.0
2,573,352	-				+0.3
2,573,352	-				-0.5
2,573,352	-				-0.1
2,573,353	+				+1.6
2,573,353	+				+3.1
2,573,353	+				+3.4
2,573,353	+				+1.4
2,573,353	+				-0.7
2,573,353	+				+0.1
2,573,354	-				+0.9
2,573,354	-				+1.6
2,573,354	-				+3.4
2,573,354	-				+1.5
2,573,354	-				+1.4
2,573,354	-				+1.3
2,573,355	+				+3.1
2,573,355	+				+1.6
2,573,355	+				-1.5
2,573,355	+				+0.8
2,573,355	+				+1.8
2,573,356	-				+1.2
2,573,356	-				+2.1
2,573,356	-				+0.6
2,573,356	-				-0.6
2,573,369	+				+1.6
2,573,383	+				+1.7
2,573,391	+				+1.6
2,573,392	-				+0.2
2,573,396	+				+1.7
2,573,396	+				+1.9
2,573,396	+				+1.9
2,573,396	+				+0.8
2,573,397	-				+3.3
2,573,397	-				+1.1
2,573,397	-				-0.0
2,573,397	-				+1.2
2,573,401	+				+1.5
2,573,457	+				+2.2
2,573,457	+				+2.0
2,573,458	-				+2.0
2,573,458	-				+1.2
2,573,458	-				+0.1
2,573,458	-				-0.8
2,573,461	+				+1.9
2,573,461	+				+1.6
2,573,461	+				+1.3
2,573,462	-				+2.1
2,573,462	-				+1.4
2,573,462	-				+2.5
2,573,462	-				+0.3
2,573,494	+				+1.5
2,573,494	+				+1.7
2,573,494	+				+2.5
2,573,495	-				+1.6
2,573,495	-				+2.8
2,573,495	-				+1.9
2,573,557	+		IAI47_12150	0.13	+0.7
2,573,557	+		IAI47_12150	0.13	+1.6