Strain Fitness in Pantoea sp. MT58 around IAI47_08480

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,794,618	+				-0.1
1,794,618	+				+0.7
1,794,684	+				+0.3
1,794,684	+				-1.7
1,794,685	-				+0.4
1,794,690	+				-2.3
1,794,690	+				-0.0
1,794,690	+				-0.1
1,794,690	+				-3.6
1,794,690	+				+0.9
1,794,690	+				-0.5
1,794,690	+				-0.7
1,794,690	+				+1.3
1,794,691	-				+1.7
1,794,691	-				+0.7
1,794,747	+				-0.1
1,794,747	+				+0.1
1,794,747	+				-0.3
1,794,747	+				-0.5
1,794,747	+				-0.7
1,794,747	+				+0.9
1,794,747	+				-1.9
1,794,748	-				+1.6
1,794,748	-				+1.0
1,794,748	-				-0.2
1,794,749	+				-2.7
1,794,749	+				+0.1
1,794,750	-				+2.5
1,794,775	+				-1.3
1,794,776	-				+0.3
1,794,776	-				-1.4
1,794,787	+				+0.4
1,794,788	-				-1.2
1,794,788	-				+1.2
1,794,797	-				-1.1
1,794,826	+				+2.3
1,794,833	-				+0.6
1,794,867	+				-0.5
1,794,910	+		IAI47_08480	0.13	-1.4
1,794,910	+		IAI47_08480	0.13	+0.9
1,794,910	+		IAI47_08480	0.13	-1.8
1,794,911	-		IAI47_08480	0.13	+0.2
1,794,920	-		IAI47_08480	0.14	-0.6
1,794,940	+		IAI47_08480	0.16	-1.5
1,794,941	-		IAI47_08480	0.16	-1.6
1,794,946	+		IAI47_08480	0.16	+0.9
1,794,946	+		IAI47_08480	0.16	+1.1
1,794,947	-		IAI47_08480	0.16	+1.1
1,794,947	-		IAI47_08480	0.16	-2.4
1,794,955	+		IAI47_08480	0.17	+1.9
1,794,956	-		IAI47_08480	0.17	-0.9
1,794,963	+		IAI47_08480	0.18	-1.9
1,794,979	-		IAI47_08480	0.19	-1.0
1,794,992	+		IAI47_08480	0.20	+0.6
1,794,993	-		IAI47_08480	0.20	-1.5
1,794,993	-		IAI47_08480	0.20	-0.6
1,794,993	-		IAI47_08480	0.20	-1.7
1,794,993	-		IAI47_08480	0.20	-0.1
1,795,014	+		IAI47_08480	0.22	-2.9
1,795,044	+		IAI47_08480	0.24	+0.7
1,795,044	+		IAI47_08480	0.24	-0.1
1,795,044	+		IAI47_08480	0.24	-0.9
1,795,045	-		IAI47_08480	0.24	-1.8
1,795,045	-		IAI47_08480	0.24	+0.9
1,795,045	-		IAI47_08480	0.24	+1.2
1,795,048	+		IAI47_08480	0.24	+0.3
1,795,048	+		IAI47_08480	0.24	+0.4
1,795,048	+		IAI47_08480	0.24	-1.7
1,795,048	+		IAI47_08480	0.24	+2.5
1,795,048	+		IAI47_08480	0.24	-0.8
1,795,048	+		IAI47_08480	0.24	-1.0
1,795,048	+		IAI47_08480	0.24	-2.3
1,795,048	+		IAI47_08480	0.24	-1.1
1,795,049	-		IAI47_08480	0.25	-0.1
1,795,049	-		IAI47_08480	0.25	+0.5
1,795,049	-		IAI47_08480	0.25	+2.3
1,795,049	-		IAI47_08480	0.25	+0.4
1,795,049	-		IAI47_08480	0.25	+0.7
1,795,049	-		IAI47_08480	0.25	-0.9
1,795,049	-		IAI47_08480	0.25	-1.3
1,795,049	-		IAI47_08480	0.25	+0.9
1,795,049	-		IAI47_08480	0.25	-1.4
1,795,049	-		IAI47_08480	0.25	-0.5
1,795,153	+		IAI47_08480	0.33	+2.9
1,795,154	-		IAI47_08480	0.33	+0.9
1,795,154	-		IAI47_08480	0.33	-0.9
1,795,154	-		IAI47_08480	0.33	+0.6
1,795,212	+		IAI47_08480	0.38	+0.6
1,795,213	-		IAI47_08480	0.38	-1.0
1,795,213	-		IAI47_08480	0.38	+2.2
1,795,213	-		IAI47_08480	0.38	+0.4
1,795,285	+		IAI47_08480	0.44	-0.3
1,795,285	+		IAI47_08480	0.44	-1.0
1,795,347	+		IAI47_08480	0.49	+1.3
1,795,347	+		IAI47_08480	0.49	+0.8
1,795,348	-		IAI47_08480	0.49	-0.3
1,795,348	-		IAI47_08480	0.49	-0.7
1,795,348	-		IAI47_08480	0.49	+2.2
1,795,376	-		IAI47_08480	0.51	+0.4
1,795,376	-		IAI47_08480	0.51	+1.0
1,795,535	+		IAI47_08480	0.64	-0.7
1,795,536	-		IAI47_08480	0.64	-0.2
1,795,536	-		IAI47_08480	0.64	+1.1
1,795,536	-		IAI47_08480	0.64	-0.1
1,795,602	+		IAI47_08480	0.69	-1.8
1,795,602	+		IAI47_08480	0.69	+0.7
1,795,784	+		IAI47_08480	0.84	+0.7
1,795,784	+		IAI47_08480	0.84	+1.4
1,795,784	+		IAI47_08480	0.84	-1.3
1,795,784	+		IAI47_08480	0.84	+0.4
1,795,785	-		IAI47_08480	0.84	+0.3
1,795,785	-		IAI47_08480	0.84	+0.9
1,795,785	-		IAI47_08480	0.84	-2.0
1,795,785	-		IAI47_08480	0.84	-0.3
1,795,785	-		IAI47_08480	0.84	+0.1
1,795,816	+		IAI47_08480	0.87	+0.1
1,795,816	+		IAI47_08480	0.87	-1.9
1,795,816	+		IAI47_08480	0.87	-0.5
1,795,817	-		IAI47_08480	0.87	-0.6
1,795,864	+				+2.3
1,795,864	+				-0.8
1,795,891	+				+1.4
1,795,891	+				+1.2
1,795,891	+				+1.3
1,795,891	+				-1.3
1,795,891	+				-1.3
1,795,891	+				+0.0
1,795,891	+				+0.9
1,795,891	+				-0.3
1,795,891	+				+2.5
1,795,892	-				+0.1
1,795,893	+				-2.2
1,795,893	+				-0.5
1,795,893	+				+1.1
1,795,893	+				+2.1
1,795,893	+				+2.0
1,795,893	+				-0.5
1,795,893	+				+2.9
1,795,893	+				+1.7
1,795,893	+				+0.9
1,795,893	+				-1.5
1,795,893	+				+1.1
1,795,893	+				+1.3
1,795,893	+				-1.1
1,795,893	+				-1.2
1,795,893	+				-1.5
1,795,894	-				-0.5
1,795,894	-				+0.5
1,795,894	-				-2.6
1,795,894	-				+0.3
1,795,894	-				+1.0
1,795,894	-				-1.3
1,795,894	-				-0.7
1,795,894	-				-0.2
1,795,894	-				-0.8
1,795,894	-				-0.3
1,795,894	-				+0.5
1,795,894	-				+1.5
1,795,897	+				+0.3
1,795,898	-				-0.6
1,795,898	-				+1.7
1,795,911	-				-2.2
1,795,948	+				-0.2
1,795,949	-				+0.4
1,795,961	-				+1.3
1,795,961	-				+0.3
1,795,961	-				-0.8
1,795,961	-				-1.1
1,795,961	-				+1.0
1,795,961	-				+1.0
1,796,035	+				-0.1
1,796,035	+				-1.5
1,796,036	-				-0.9
1,796,036	-				-0.3
1,796,064	+				+1.2
1,796,064	+				-1.5
1,796,164	+				-1.5
1,796,164	+				-1.7
1,796,165	-				-0.4
1,796,247	+		IAI47_08485	0.13	-1.7
1,796,248	-		IAI47_08485	0.13	-1.3
1,796,257	+		IAI47_08485	0.13	-1.1
1,796,314	+		IAI47_08485	0.17	-1.6
1,796,315	-		IAI47_08485	0.17	+0.0
1,796,336	-		IAI47_08485	0.19	+0.1
1,796,394	+		IAI47_08485	0.23	-1.6
1,796,394	+		IAI47_08485	0.23	+0.6
1,796,394	+		IAI47_08485	0.23	+0.7
1,796,394	+		IAI47_08485	0.23	+1.0
1,796,394	+		IAI47_08485	0.23	-2.0
1,796,394	+		IAI47_08485	0.23	-2.1
1,796,395	-		IAI47_08485	0.23	-0.3
1,796,395	-		IAI47_08485	0.23	-1.3
1,796,395	-		IAI47_08485	0.23	-0.5
1,796,395	-		IAI47_08485	0.23	-0.4
1,796,398	+		IAI47_08485	0.23	-0.3
1,796,398	+		IAI47_08485	0.23	-1.2
1,796,398	+		IAI47_08485	0.23	-0.4
1,796,398	+		IAI47_08485	0.23	-0.9
1,796,398	+		IAI47_08485	0.23	+0.7
1,796,398	+		IAI47_08485	0.23	-0.4
1,796,398	+		IAI47_08485	0.23	-1.5
1,796,398	+		IAI47_08485	0.23	-0.2
1,796,399	-		IAI47_08485	0.23	-0.1
1,796,399	-		IAI47_08485	0.23	-0.3
1,796,399	-		IAI47_08485	0.23	-2.3
1,796,399	-		IAI47_08485	0.23	+1.8
1,796,399	-		IAI47_08485	0.23	+1.3
1,796,399	-		IAI47_08485	0.23	-0.7
1,796,399	-		IAI47_08485	0.23	+0.1
1,796,399	-		IAI47_08485	0.23	-0.0
1,796,399	-		IAI47_08485	0.23	+1.0
1,796,399	-		IAI47_08485	0.23	+1.0
1,796,399	-		IAI47_08485	0.23	+0.9
1,796,399	-		IAI47_08485	0.23	-2.1
1,796,399	-		IAI47_08485	0.23	+1.4
1,796,399	-		IAI47_08485	0.23	-0.2
1,796,399	-		IAI47_08485	0.23	+1.0
1,796,407	+		IAI47_08485	0.24	+0.5
1,796,407	+		IAI47_08485	0.24	-0.7
1,796,407	+		IAI47_08485	0.24	-2.2
1,796,602	+		IAI47_08485	0.37	-1.2
1,796,603	-		IAI47_08485	0.37	+0.1
1,796,603	-		IAI47_08485	0.37	-1.4
1,796,629	+		IAI47_08485	0.39	-2.1
1,796,663	-		IAI47_08485	0.42	-0.9
1,796,668	+		IAI47_08485	0.42	-1.4
1,796,668	+		IAI47_08485	0.42	+0.1
1,796,668	+		IAI47_08485	0.42	-1.5
1,796,668	+		IAI47_08485	0.42	-1.8
1,796,668	+		IAI47_08485	0.42	-0.7
1,796,668	+		IAI47_08485	0.42	+0.5
1,796,669	-		IAI47_08485	0.42	+1.5
1,796,669	-		IAI47_08485	0.42	-2.3
1,796,669	-		IAI47_08485	0.42	+0.7
1,796,669	-		IAI47_08485	0.42	-1.9
1,796,669	-		IAI47_08485	0.42	+0.2
1,796,896	+		IAI47_08485	0.58	-1.2
1,796,896	+		IAI47_08485	0.58	+0.0
1,796,897	-		IAI47_08485	0.58	+1.5
1,796,897	-		IAI47_08485	0.58	-0.3
1,796,897	-		IAI47_08485	0.58	-1.4
1,796,931	+		IAI47_08485	0.60	-1.5
1,796,931	+		IAI47_08485	0.60	+2.1
1,796,932	-		IAI47_08485	0.60	+0.1
1,796,947	+		IAI47_08485	0.61	+3.0
1,796,948	-		IAI47_08485	0.61	-1.5
1,796,971	+		IAI47_08485	0.63	+1.1
1,796,972	-		IAI47_08485	0.63	-0.9