Strain Fitness in Pantoea sp. MT58 around IAI47_21865

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
123,023	+		IAI47_21860	0.32	-1.9
123,023	+		IAI47_21860	0.32	-1.5
123,023	+		IAI47_21860	0.32	+1.7
123,023	+		IAI47_21860	0.32	-1.6
123,023	+		IAI47_21860	0.32	+0.2
123,024	-		IAI47_21860	0.32	-0.8
123,024	-		IAI47_21860	0.32	+1.2
123,024	-		IAI47_21860	0.32	+1.2
123,024	-		IAI47_21860	0.32	+0.7
123,024	-				-0.0
123,024	-		IAI47_21860	0.32	+0.8
123,056	-		IAI47_21860	0.35	-0.8
123,056	-		IAI47_21860	0.35	+0.6
123,056	-		IAI47_21860	0.35	+1.0
123,069	+		IAI47_21860	0.35	+0.8
123,069	+		IAI47_21860	0.35	-0.7
123,069	+		IAI47_21860	0.35	-2.0
123,069	+		IAI47_21860	0.35	-0.7
123,069	+		IAI47_21860	0.35	-0.3
123,069	+		IAI47_21860	0.35	+2.8
123,070	-		IAI47_21860	0.36	-1.9
123,070	-		IAI47_21860	0.36	+0.8
123,140	+		IAI47_21860	0.41	-1.3
123,141	-		IAI47_21860	0.41	-1.1
123,141	-		IAI47_21860	0.41	-1.7
123,141	-		IAI47_21860	0.41	+3.8
123,158	+		IAI47_21860	0.42	+2.5
123,158	+		IAI47_21860	0.42	-1.1
123,159	-		IAI47_21860	0.42	-1.0
123,159	-		IAI47_21860	0.42	-0.2
123,165	+		IAI47_21860	0.42	+0.8
123,165	+		IAI47_21860	0.42	+0.3
123,165	+		IAI47_21860	0.42	-1.7
123,185	+		IAI47_21860	0.44	-0.7
123,185	+		IAI47_21860	0.44	+0.6
123,185	+		IAI47_21860	0.44	+0.3
123,186	-		IAI47_21860	0.44	+0.5
123,186	-		IAI47_21860	0.44	+0.1
123,186	-		IAI47_21860	0.44	-0.3
123,231	+		IAI47_21860	0.47	+0.3
123,234	+		IAI47_21860	0.47	-0.6
123,235	-		IAI47_21860	0.48	-1.9
123,243	+		IAI47_21860	0.48	+1.6
123,243	+		IAI47_21860	0.48	-1.9
123,243	+		IAI47_21860	0.48	+0.2
123,243	+		IAI47_21860	0.48	-0.2
123,243	+		IAI47_21860	0.48	+0.9
123,244	-		IAI47_21860	0.48	-0.7
123,244	-		IAI47_21860	0.48	-0.8
123,244	-		IAI47_21860	0.48	-0.6
123,244	-		IAI47_21860	0.48	+0.3
123,244	-		IAI47_21860	0.48	-0.3
123,244	-		IAI47_21860	0.48	+1.0
123,244	-		IAI47_21860	0.48	-1.0
123,244	-		IAI47_21860	0.48	-0.1
123,295	-		IAI47_21860	0.52	-0.8
123,295	-		IAI47_21860	0.52	-1.2
123,308	-		IAI47_21860	0.53	-0.5
123,479	+		IAI47_21860	0.65	+0.1
123,479	+		IAI47_21860	0.65	+0.3
123,480	-		IAI47_21860	0.65	-0.0
123,480	-		IAI47_21860	0.65	-1.7
123,480	-		IAI47_21860	0.65	+0.1
123,480	-		IAI47_21860	0.65	+1.2
123,482	+		IAI47_21860	0.66	+0.3
123,483	-		IAI47_21860	0.66	-1.2
123,483	-		IAI47_21860	0.66	+1.2
123,483	-		IAI47_21860	0.66	-0.1
123,503	+		IAI47_21860	0.67	+2.2
123,503	+		IAI47_21860	0.67	-0.4
123,503	+		IAI47_21860	0.67	+1.9
123,504	-		IAI47_21860	0.67	+1.2
123,504	-		IAI47_21860	0.67	+1.9
123,504	-		IAI47_21860	0.67	+1.3
123,504	-		IAI47_21860	0.67	-1.4
123,504	-		IAI47_21860	0.67	+0.2
123,504	-		IAI47_21860	0.67	-1.8
123,505	-		IAI47_21860	0.67	-1.1
123,517	+		IAI47_21860	0.68	-0.4
123,517	+		IAI47_21860	0.68	-2.3
123,517	+		IAI47_21860	0.68	-0.5
123,517	+		IAI47_21860	0.68	+0.2
123,517	+		IAI47_21860	0.68	-1.9
123,517	+		IAI47_21860	0.68	-2.2
123,517	+		IAI47_21860	0.68	-1.3
123,517	+		IAI47_21860	0.68	-1.4
123,518	-		IAI47_21860	0.68	+1.5
123,518	-		IAI47_21860	0.68	+1.6
123,518	-		IAI47_21860	0.68	-0.4
123,518	-		IAI47_21860	0.68	-0.5
123,518	-		IAI47_21860	0.68	+2.1
123,518	-		IAI47_21860	0.68	+0.7
123,518	-		IAI47_21860	0.68	+0.4
123,518	-		IAI47_21860	0.68	+0.8
123,547	+		IAI47_21860	0.70	-0.9
123,548	-		IAI47_21860	0.70	+0.6
123,656	+		IAI47_21860	0.78	-1.2
123,657	-		IAI47_21860	0.78	+3.2
123,657	-		IAI47_21860	0.78	+1.0
123,657	-		IAI47_21860	0.78	+1.8
123,657	-		IAI47_21860	0.78	+0.1
123,674	+		IAI47_21860	0.80	+0.5
123,674	+		IAI47_21860	0.80	+0.4
123,675	-		IAI47_21860	0.80	+0.2
123,704	+		IAI47_21860	0.82	-0.9
123,733	+		IAI47_21860	0.84	+0.1
123,734	-		IAI47_21860	0.84	+1.7
123,744	+		IAI47_21860	0.85	+1.4
123,744	+		IAI47_21860	0.85	+2.3
123,745	-		IAI47_21860	0.85	+1.1
123,745	-		IAI47_21860	0.85	-0.9
123,745	-		IAI47_21860	0.85	+0.7
123,745	-		IAI47_21860	0.85	+0.3
123,764	+		IAI47_21860	0.86	+0.5
123,765	-		IAI47_21860	0.86	+1.5
123,765	-		IAI47_21860	0.86	+0.3
123,785	+		IAI47_21860	0.88	-1.4
123,800	+		IAI47_21860	0.89	-0.1
123,828	-				-0.7
123,905	+				-2.2
123,905	+				+0.1
123,905	+				+1.5
123,906	-				-0.9
123,906	-				+0.9
123,925	-				+0.9
123,942	+				+1.4
123,943	-				+0.2
123,943	-				+0.1
123,943	-				+0.7
123,946	+				-0.9
123,946	+				+0.3
123,946	+				+1.0
123,946	+				+0.5
123,946	+				-0.1
123,946	+				-0.0
123,947	-				+0.0
123,947	-				+0.2
123,947	-				-0.2
123,947	-				-0.9
123,947	-				+2.5
123,953	+				+1.6
123,953	+				-0.4
123,953	+				-0.7
123,953	+				+0.9
123,954	-				+0.8
123,955	+				+1.3
123,955	+				+0.4
123,955	+				+1.1
123,955	+				-0.8
123,955	+				+1.0
123,955	+				+0.2
123,955	+				-2.4
123,955	+				-1.3
123,955	+				+0.9
123,955	+				-0.6
123,955	+				+0.1
123,955	+				+0.4
123,955	+				-0.2
123,956	-				+0.5
123,956	-				+0.2
123,956	-				+2.5
123,956	-				-0.0
123,956	-				-0.2
123,956	-				-0.8
123,956	-				-0.7
123,956	-				-0.2
123,956	-				-2.2
123,956	-				+1.2
123,956	-				-1.6
123,956	-				+2.3
123,956	-				-0.3
123,956	-				+1.5
123,956	-				+1.3
123,956	-				-1.5
123,956	-				+0.5
123,956	-				+0.1
123,980	-				-0.8
124,042	+				-0.1
124,042	+				-1.0
124,043	-				-1.5
124,043	-				+0.2
124,106	+				-0.4
124,106	+				+1.4
124,106	+				+0.6
124,106	+				-1.5
124,106	+				-1.2
124,106	+				-0.2
124,106	+				-0.6
124,106	+				-0.2
124,106	+				+1.7
124,106	+				-1.8
124,106	+				-0.7
124,107	-				-1.5
124,107	-				-0.4
124,107	-				+0.0
124,107	-				-2.5
124,107	-				-0.5
124,110	+				+0.8
124,110	+				+1.0
124,111	-				+1.0
124,111	-				-1.5
124,111	-				-2.2
124,111	-				-1.2
124,168	-				-1.5
124,171	+				+1.1
124,209	+		IAI47_21865	0.12	-1.5
124,209	+		IAI47_21865	0.12	-0.5
124,209	+		IAI47_21865	0.12	-0.5
124,209	+		IAI47_21865	0.12	-1.0
124,209	+		IAI47_21865	0.12	-0.7
124,209	+		IAI47_21865	0.12	-1.4
124,210	-		IAI47_21865	0.12	-1.3
124,210	-		IAI47_21865	0.12	-1.4
124,221	+		IAI47_21865	0.13	+1.5
124,221	+		IAI47_21865	0.13	+1.1
124,253	+		IAI47_21865	0.15	+3.2
124,253	+		IAI47_21865	0.15	-1.7
124,254	-		IAI47_21865	0.15	-1.4
124,277	+		IAI47_21865	0.17	-0.0
124,277	+		IAI47_21865	0.17	+1.2
124,277	+		IAI47_21865	0.17	+0.0
124,277	+		IAI47_21865	0.17	-1.2
124,277	+		IAI47_21865	0.17	+0.9
124,277	+		IAI47_21865	0.17	-1.1
124,277	+		IAI47_21865	0.17	-0.0
124,278	-		IAI47_21865	0.17	-1.2
124,278	-		IAI47_21865	0.17	+1.5
124,278	-		IAI47_21865	0.17	+1.4
124,278	-		IAI47_21865	0.17	-1.6
124,283	+		IAI47_21865	0.17	-0.7
124,283	+		IAI47_21865	0.17	-1.6
124,283	+		IAI47_21865	0.17	-0.2
124,284	-		IAI47_21865	0.17	-1.3
124,284	-		IAI47_21865	0.17	-0.5
124,284	-		IAI47_21865	0.17	+0.2
124,295	+		IAI47_21865	0.18	+1.0
124,295	+		IAI47_21865	0.18	+0.5
124,295	+		IAI47_21865	0.18	-0.2
124,296	-		IAI47_21865	0.18	+0.7
124,296	-		IAI47_21865	0.18	-1.0
124,341	+		IAI47_21865	0.21	+1.6
124,341	+		IAI47_21865	0.21	-0.5
124,341	+		IAI47_21865	0.21	+0.9
124,342	-		IAI47_21865	0.21	-1.1
124,358	+		IAI47_21865	0.22	+0.3
124,358	+		IAI47_21865	0.22	-2.5
124,358	+		IAI47_21865	0.22	+1.0
124,358	+		IAI47_21865	0.22	+2.5
124,358	+		IAI47_21865	0.22	+0.4
124,358	+		IAI47_21865	0.22	-1.6
124,358	+		IAI47_21865	0.22	-0.1
124,358	+		IAI47_21865	0.22	-1.0
124,359	-		IAI47_21865	0.22	-1.7
124,359	-		IAI47_21865	0.22	+0.1
124,359	-		IAI47_21865	0.22	-1.7
124,359	-		IAI47_21865	0.22	-0.2
124,359	-		IAI47_21865	0.22	-2.1
124,359	-		IAI47_21865	0.22	-2.0
124,376	+		IAI47_21865	0.23	-1.9
124,376	+		IAI47_21865	0.23	+1.6
124,377	-		IAI47_21865	0.23	+0.5
124,402	+		IAI47_21865	0.25	-0.2
124,403	-		IAI47_21865	0.25	+2.3
124,535	+		IAI47_21865	0.33	-1.6
124,535	+		IAI47_21865	0.33	+0.7
124,535	+		IAI47_21865	0.33	+0.1
124,536	-		IAI47_21865	0.34	-0.9
124,536	-		IAI47_21865	0.34	-0.5
124,574	+		IAI47_21865	0.36	+2.9
124,574	+		IAI47_21865	0.36	-0.2
124,575	-		IAI47_21865	0.36	-2.8
124,575	-		IAI47_21865	0.36	-2.6
124,609	+		IAI47_21865	0.38	-0.0
124,609	+		IAI47_21865	0.38	-0.1
124,609	+		IAI47_21865	0.38	+1.2
124,609	+		IAI47_21865	0.38	-0.9
124,609	+		IAI47_21865	0.38	+0.7
124,609	+		IAI47_21865	0.38	+1.3
124,609	+		IAI47_21865	0.38	+0.2
124,610	-		IAI47_21865	0.38	-1.2
124,610	-		IAI47_21865	0.38	-0.2
124,610	-		IAI47_21865	0.38	+0.7
124,610	-		IAI47_21865	0.38	-0.3
124,671	+		IAI47_21865	0.42	+0.2
124,672	-		IAI47_21865	0.42	-1.4
124,686	+		IAI47_21865	0.43	+0.9
124,687	-		IAI47_21865	0.43	-2.3
124,722	+		IAI47_21865	0.46	+0.1
124,739	+		IAI47_21865	0.47	-1.1
124,739	+		IAI47_21865	0.47	-0.5
124,739	+		IAI47_21865	0.47	+1.1
124,740	-		IAI47_21865	0.47	-1.1
124,740	-		IAI47_21865	0.47	-0.8
124,740	-		IAI47_21865	0.47	+0.8
124,740	-		IAI47_21865	0.47	+1.4
124,752	+		IAI47_21865	0.48	-0.2
124,782	+		IAI47_21865	0.50	-0.9
124,790	+		IAI47_21865	0.50	+1.4
124,791	-		IAI47_21865	0.50	+0.1
124,807	-		IAI47_21865	0.51	-1.5
124,807	-		IAI47_21865	0.51	+0.2
124,835	+		IAI47_21865	0.53	+1.1
124,835	+		IAI47_21865	0.53	+1.5
124,836	-		IAI47_21865	0.53	-0.7
124,836	-		IAI47_21865	0.53	-1.6
124,852	-		IAI47_21865	0.54	+0.3
124,899	+		IAI47_21865	0.57	-0.4
124,900	-		IAI47_21865	0.57	-2.1
124,900	-		IAI47_21865	0.57	-0.7
124,900	-		IAI47_21865	0.57	-2.5
124,932	+		IAI47_21865	0.59	+1.1
124,932	+		IAI47_21865	0.59	+0.2
124,932	+		IAI47_21865	0.59	-0.4
124,933	-		IAI47_21865	0.59	-0.9
124,938	+		IAI47_21865	0.60	+1.3
124,938	+		IAI47_21865	0.60	-0.5
124,939	-		IAI47_21865	0.60	-0.4
124,939	-		IAI47_21865	0.60	-1.4
124,939	-		IAI47_21865	0.60	+0.1
124,939	-		IAI47_21865	0.60	-0.4
125,029	-		IAI47_21865	0.66	-1.5
125,030	+		IAI47_21865	0.66	-0.2
125,030	+		IAI47_21865	0.66	-2.1
125,030	+		IAI47_21865	0.66	+1.2
125,030	+		IAI47_21865	0.66	-1.2
125,030	+		IAI47_21865	0.66	-1.0
125,030	+		IAI47_21865	0.66	+0.4
125,030	+		IAI47_21865	0.66	+0.4
125,030	+		IAI47_21865	0.66	+0.1
125,031	-		IAI47_21865	0.66	-0.4
125,031	-		IAI47_21865	0.66	+0.5
125,031	-		IAI47_21865	0.66	-1.7
125,031	-		IAI47_21865	0.66	+0.7
125,031	-		IAI47_21865	0.66	+1.0
125,031	-		IAI47_21865	0.66	+0.7
125,031	-		IAI47_21865	0.66	-2.5
125,031	-		IAI47_21865	0.66	+0.5
125,073	+		IAI47_21865	0.68	+0.4
125,073	+		IAI47_21865	0.68	+0.5
125,073	+		IAI47_21865	0.68	-1.7
125,074	-		IAI47_21865	0.69	+0.4
125,074	-		IAI47_21865	0.69	+0.8
125,074	-		IAI47_21865	0.69	-1.0
125,074	-		IAI47_21865	0.69	+0.2
125,074	-		IAI47_21865	0.69	-2.1
125,082	+		IAI47_21865	0.69	+1.4
125,082	+		IAI47_21865	0.69	-0.0
125,083	-		IAI47_21865	0.69	-0.1
125,097	+		IAI47_21865	0.70	+0.5
125,097	+		IAI47_21865	0.70	-1.9
125,097	+		IAI47_21865	0.70	-1.6
125,097	+		IAI47_21865	0.70	-0.1
125,097	+		IAI47_21865	0.70	+1.4
125,120	+		IAI47_21865	0.72	-1.0
125,120	+		IAI47_21865	0.72	-0.3
125,120	+		IAI47_21865	0.72	-0.7
125,120	+		IAI47_21865	0.72	-0.9
125,120	+		IAI47_21865	0.72	-0.4
125,120	+		IAI47_21865	0.72	+0.9
125,120	+		IAI47_21865	0.72	-0.7
125,120	+		IAI47_21865	0.72	-0.8
125,120	+		IAI47_21865	0.72	+2.5
125,120	+		IAI47_21865	0.72	+1.6
125,120	+		IAI47_21865	0.72	+0.7
125,120	+		IAI47_21865	0.72	+0.2
125,120	+		IAI47_21865	0.72	+0.0
125,120	+		IAI47_21865	0.72	+0.2
125,120	+		IAI47_21865	0.72	-1.1
125,120	+		IAI47_21865	0.72	-0.5
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