Strain Fitness in Pantoea sp. MT58 around IAI47_17570

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,724,924	-		IAI47_17565	0.40	-1.0
3,725,044	-		IAI47_17565	0.54	+0.1
3,725,044	-		IAI47_17565	0.54	+0.4
3,725,044	-		IAI47_17565	0.54	-0.2
3,725,044	-		IAI47_17565	0.54	-0.8
3,725,044	-		IAI47_17565	0.54	-2.2
3,725,092	-		IAI47_17565	0.59	+1.7
3,725,092	-		IAI47_17565	0.59	+0.9
3,725,092	-		IAI47_17565	0.59	-1.1
3,725,344	-		IAI47_17565	0.88	+0.4
3,725,439	-				-3.5
3,725,439	-				+1.3
3,725,439	-				+0.5
3,725,439	-				-0.3
3,725,440	-				-3.2
3,725,470	-				-0.4
3,725,470	-				-0.2
3,725,470	-				-0.0
3,725,477	-				+1.5
3,725,477	-				-1.9
3,725,479	-				+1.1
3,725,479	-				-0.8
3,725,479	-				-0.8
3,725,479	-				-1.0
3,725,479	-				+1.1
3,725,485	-				-0.5
3,725,485	-				-1.0
3,725,531	-				+1.2
3,725,531	-				+1.8
3,725,534	+				-0.9
3,725,535	-				+1.8
3,725,638	-				+1.3
3,725,640	+				+0.0
3,725,657	+				-1.0
3,725,658	-				+0.9
3,725,719	+				-1.5
3,725,719	+				-0.6
3,725,719	+				-0.6
3,725,719	+				+0.4
3,725,720	-				-2.2
3,725,720	-				-1.8
3,725,730	+				+2.0
3,725,730	+				-2.0
3,725,730	+				-0.2
3,725,730	+				-1.3
3,725,730	+				+1.0
3,725,730	+				+1.2
3,725,731	-				-0.0
3,725,731	-				-0.1
3,725,731	-				+1.5
3,725,731	-				+0.5
3,725,738	-				-1.5
3,725,805	+				-3.4
3,725,813	+				-1.2
3,725,813	+				-1.8
3,725,813	+				+1.3
3,725,813	+				+1.6
3,725,813	+				-1.3
3,725,813	+				+1.9
3,725,814	-				-1.1
3,725,814	-				+0.4
3,725,814	-				-1.1
3,725,816	+				+1.5
3,725,816	+				-1.6
3,725,816	+				+0.8
3,725,816	+				+0.4
3,725,816	+				+1.0
3,725,816	+				+0.2
3,725,817	-				+2.5
3,725,817	-				-2.6
3,725,817	-				-0.8
3,725,842	+		IAI47_17570	0.10	+1.3
3,725,842	+		IAI47_17570	0.10	+0.6
3,725,843	-		IAI47_17570	0.10	+0.7
3,725,861	-		IAI47_17570	0.12	+0.6
3,725,999	-		IAI47_17570	0.24	+0.0
3,726,020	-		IAI47_17570	0.26	+0.9
3,726,101	+		IAI47_17570	0.33	+0.5
3,726,101	+		IAI47_17570	0.33	-2.0
3,726,102	-		IAI47_17570	0.33	-2.9
3,726,102	-		IAI47_17570	0.33	-0.3
3,726,113	+		IAI47_17570	0.34	+2.5
3,726,114	-		IAI47_17570	0.34	-0.5
3,726,184	+		IAI47_17570	0.40	-1.8
3,726,184	+		IAI47_17570	0.40	-0.2
3,726,184	+		IAI47_17570	0.40	-0.0
3,726,184	+		IAI47_17570	0.40	+2.9
3,726,184	+		IAI47_17570	0.40	+0.8
3,726,184	+		IAI47_17570	0.40	-0.1
3,726,184	+		IAI47_17570	0.40	-1.6
3,726,185	-		IAI47_17570	0.40	-1.8
3,726,185	-		IAI47_17570	0.40	-1.2
3,726,185	-		IAI47_17570	0.40	-0.8
3,726,185	-		IAI47_17570	0.40	-2.2
3,726,185	-		IAI47_17570	0.40	+0.4
3,726,185	-		IAI47_17570	0.40	+1.6
3,726,185	-		IAI47_17570	0.40	+0.1
3,726,194	+		IAI47_17570	0.41	+3.2
3,726,239	+		IAI47_17570	0.45	+0.2
3,726,239	+		IAI47_17570	0.45	-0.8
3,726,240	-		IAI47_17570	0.45	+0.4
3,726,240	-		IAI47_17570	0.45	-1.2
3,726,240	-		IAI47_17570	0.45	+1.2
3,726,251	+		IAI47_17570	0.46	+0.3
3,726,251	+		IAI47_17570	0.46	-0.3
3,726,251	+		IAI47_17570	0.46	+0.5
3,726,252	-		IAI47_17570	0.46	-0.2
3,726,253	+		IAI47_17570	0.46	-0.5
3,726,254	-		IAI47_17570	0.46	-0.2
3,726,287	+		IAI47_17570	0.49	-1.9
3,726,287	+		IAI47_17570	0.49	+1.2
3,726,287	+		IAI47_17570	0.49	+1.1
3,726,288	-		IAI47_17570	0.49	+1.2
3,726,288	-		IAI47_17570	0.49	+0.5
3,726,288	-		IAI47_17570	0.49	+1.0
3,726,300	+		IAI47_17570	0.50	+0.2
3,726,300	+		IAI47_17570	0.50	+0.1
3,726,301	-		IAI47_17570	0.50	-0.2
3,726,398	+		IAI47_17570	0.58	+0.6
3,726,398	+		IAI47_17570	0.58	-1.1
3,726,398	+		IAI47_17570	0.58	-0.3
3,726,457	+		IAI47_17570	0.63	-0.7
3,726,457	+		IAI47_17570	0.63	-2.0
3,726,457	+		IAI47_17570	0.63	-0.9
3,726,458	-		IAI47_17570	0.63	-0.4
3,726,467	+		IAI47_17570	0.64	+0.7
3,726,489	-		IAI47_17570	0.66	-1.4
3,726,602	+		IAI47_17570	0.76	+0.7
3,726,602	+		IAI47_17570	0.76	-0.2
3,726,602	+		IAI47_17570	0.76	+0.3
3,726,603	-		IAI47_17570	0.76	+0.4
3,726,603	-		IAI47_17570	0.76	-1.2
3,726,603	-		IAI47_17570	0.76	+0.0
3,726,603	-		IAI47_17570	0.76	+0.6
3,726,603	-		IAI47_17570	0.76	+0.9
3,726,603	-		IAI47_17570	0.76	+0.1
3,726,612	+		IAI47_17570	0.77	-1.1
3,726,612	+		IAI47_17570	0.77	+1.1
3,726,612	+		IAI47_17570	0.77	-0.3
3,726,613	-		IAI47_17570	0.77	+1.1
3,726,616	+		IAI47_17570	0.77	-0.1
3,726,616	+		IAI47_17570	0.77	-1.2
3,726,617	-		IAI47_17570	0.77	+0.9
3,726,617	-		IAI47_17570	0.77	+1.4
3,726,617	-		IAI47_17570	0.77	+0.8
3,726,617	-		IAI47_17570	0.77	-0.3
3,726,617	-		IAI47_17570	0.77	-0.8
3,726,617	-		IAI47_17570	0.77	-0.3
3,726,617	-		IAI47_17570	0.77	+1.4
3,726,653	+		IAI47_17570	0.80	+2.6
3,726,654	-		IAI47_17570	0.80	+0.2
3,726,668	+		IAI47_17570	0.82	-0.2
3,726,668	+		IAI47_17570	0.82	+1.1
3,726,668	+		IAI47_17570	0.82	-0.6
3,726,668	+		IAI47_17570	0.82	-1.3
3,726,668	+		IAI47_17570	0.82	+0.5
3,726,668	+		IAI47_17570	0.82	-1.0
3,726,669	-		IAI47_17570	0.82	-0.0
3,726,669	-		IAI47_17570	0.82	-0.3
3,726,669	-		IAI47_17570	0.82	+0.3
3,726,669	-		IAI47_17570	0.82	+0.5
3,726,669	-		IAI47_17570	0.82	-0.7
3,726,669	-		IAI47_17570	0.82	+2.8
3,726,669	-		IAI47_17570	0.82	+1.0
3,726,669	-		IAI47_17570	0.82	-0.0
3,726,669	-		IAI47_17570	0.82	+0.2
3,726,669	-		IAI47_17570	0.82	+0.7
3,726,680	+		IAI47_17570	0.83	+0.6
3,726,681	-		IAI47_17570	0.83	-1.8
3,726,681	-		IAI47_17570	0.83	-0.0
3,726,681	-		IAI47_17570	0.83	-1.1
3,726,716	-		IAI47_17570	0.86	-0.3
3,726,721	+		IAI47_17570	0.86	+1.8
3,726,721	+		IAI47_17570	0.86	+0.1
3,726,721	+		IAI47_17570	0.86	-0.9
3,726,722	-		IAI47_17570	0.86	-1.1
3,726,722	-		IAI47_17570	0.86	+0.6
3,726,722	-		IAI47_17570	0.86	+1.7
3,726,722	-		IAI47_17570	0.86	-1.5
3,726,722	-				-1.8
3,726,724	+		IAI47_17570	0.86	-0.0
3,726,724	+		IAI47_17570	0.86	+0.0
3,726,724	+		IAI47_17570	0.86	+0.5
3,726,725	-		IAI47_17570	0.87	-1.7
3,726,725	-		IAI47_17570	0.87	+1.6
3,726,725	-		IAI47_17570	0.87	-0.1
3,726,820	-				-0.1
3,726,826	+				+2.0
3,726,935	+				-1.9
3,726,935	+				-1.2
3,726,936	-				+1.1
3,726,944	+				+0.3
3,726,945	-				+0.9
3,726,945	-				+2.8
3,726,954	+				+1.0
3,726,954	+				-0.1
3,726,954	+				-0.3
3,726,973	+				-1.4
3,726,973	+				-0.9
3,726,974	-				+1.7
3,726,984	+				+1.9
3,726,985	-				-2.7
3,726,985	-				-0.4
3,726,996	+				+0.3
3,726,997	-				-1.6
3,726,997	-				+2.8
3,726,999	+				+0.8
3,727,000	-				+1.3
3,727,000	-				+0.4
3,727,000	-				+3.0
3,727,000	-				+0.6
3,727,082	+				-1.1
3,727,082	+				+0.4
3,727,082	+				+0.6
3,727,082	+				-1.3
3,727,082	+				+0.9
3,727,083	-				-0.4
3,727,090	+				+1.5
3,727,090	+				-0.7
3,727,090	+				-2.0
3,727,090	+				+1.5
3,727,090	+				-2.6
3,727,090	+				-0.7
3,727,090	+				-1.4
3,727,090	+				-1.3
3,727,090	+				-0.7
3,727,090	+				+0.8
3,727,090	+				-0.1
3,727,090	+				-1.0
3,727,090	+				+3.1
3,727,091	-				-0.4
3,727,091	-				+0.3
3,727,091	-				+1.5
3,727,091	-				+1.0
3,727,091	-				-1.4
3,727,091	-				+0.1
3,727,091	-				-3.3
3,727,091	-				+2.4
3,727,091	-				+3.4
3,727,092	+				-0.2
3,727,092	+				-0.2
3,727,092	+				+0.4
3,727,092	+				-0.4
3,727,092	+				-1.4
3,727,092	+				+1.8
3,727,092	+				-0.4
3,727,093	-				+1.6
3,727,093	-				+1.5
3,727,093	-				+0.7
3,727,107	-				+0.4
3,727,107	-				+0.2
3,727,107	-				+1.7
3,727,107	-				+1.3
3,727,213	+				+0.5
3,727,213	+				+1.0
3,727,269	+				+2.0
3,727,269	+				-1.3
3,727,269	+				-1.8
3,727,269	+				+3.6
3,727,269	+				+0.2
3,727,269	+				-1.9
3,727,269	+				+0.0
3,727,269	+				-0.5
3,727,269	+				+0.5
3,727,269	+				+2.3
3,727,269	+				+0.3
3,727,269	+				-0.5
3,727,269	+				-0.9
3,727,269	+				-0.7
3,727,269	+				+0.3
3,727,269	+				+0.5
3,727,269	+				-3.4
3,727,270	-				-1.4
3,727,270	-				+1.3
3,727,270	-				-1.6
3,727,270	-				-1.1
3,727,270	-				-0.9
3,727,299	-				-0.9
3,727,333	+				-0.3
3,727,341	+				-1.2
3,727,432	+				+0.1
3,727,433	-				-0.8
3,727,519	+		IAI47_17575	0.14	+1.4
3,727,519	+		IAI47_17575	0.14	+1.6
3,727,520	-		IAI47_17575	0.14	-1.0
3,727,520	-		IAI47_17575	0.14	+0.6
3,727,523	-		IAI47_17575	0.15	-1.5
3,727,523	-		IAI47_17575	0.15	-1.1
3,727,523	-		IAI47_17575	0.15	+0.5
3,727,523	-		IAI47_17575	0.15	+0.5
3,727,525	+		IAI47_17575	0.15	-0.1
3,727,525	+		IAI47_17575	0.15	+0.5
3,727,525	+		IAI47_17575	0.15	-1.3
3,727,525	+		IAI47_17575	0.15	-0.4
3,727,525	+		IAI47_17575	0.15	+0.5
3,727,525	+		IAI47_17575	0.15	+0.5
3,727,525	+		IAI47_17575	0.15	-0.9
3,727,525	+		IAI47_17575	0.15	+2.4
3,727,526	-		IAI47_17575	0.15	+0.6
3,727,526	-		IAI47_17575	0.15	-0.6
3,727,526	-		IAI47_17575	0.15	-1.4
3,727,526	-		IAI47_17575	0.15	-1.3
3,727,529	+		IAI47_17575	0.15	-1.5
3,727,530	-		IAI47_17575	0.15	+0.1
3,727,565	-		IAI47_17575	0.18	-0.3
3,727,606	+		IAI47_17575	0.21	-0.8
3,727,606	+		IAI47_17575	0.21	+1.5
3,727,606	+		IAI47_17575	0.21	-1.7
3,727,606	+		IAI47_17575	0.21	+0.8
3,727,606	+		IAI47_17575	0.21	-1.9
3,727,606	+		IAI47_17575	0.21	-0.5
3,727,606	+		IAI47_17575	0.21	-1.9
3,727,606	+		IAI47_17575	0.21	-0.5
3,727,606	+		IAI47_17575	0.21	-0.1
3,727,606	+		IAI47_17575	0.21	+0.3
3,727,607	-		IAI47_17575	0.21	-2.4
3,727,607	-		IAI47_17575	0.21	+0.6
3,727,607	-		IAI47_17575	0.21	+0.9
3,727,607	-		IAI47_17575	0.21	-1.3
3,727,607	-		IAI47_17575	0.21	+0.1
3,727,607	-		IAI47_17575	0.21	-0.3
3,727,615	+		IAI47_17575	0.22	-1.9
3,727,615	+		IAI47_17575	0.22	+1.9
3,727,615	+		IAI47_17575	0.22	+1.9
3,727,615	+		IAI47_17575	0.22	+0.3
3,727,615	+		IAI47_17575	0.22	-0.9
3,727,615	+		IAI47_17575	0.22	+0.0
3,727,615	+		IAI47_17575	0.22	+0.6
3,727,616	-		IAI47_17575	0.22	+0.6
3,727,616	-		IAI47_17575	0.22	-2.7
3,727,616	-		IAI47_17575	0.22	-0.7
3,727,679	+		IAI47_17575	0.27	+0.7
3,727,679	+		IAI47_17575	0.27	-0.6
3,727,680	-		IAI47_17575	0.27	-0.3
3,727,680	-		IAI47_17575	0.27	+2.6
3,727,706	+		IAI47_17575	0.29	-0.7
3,727,706	+		IAI47_17575	0.29	-2.1
3,727,706	+		IAI47_17575	0.29	-0.3
3,727,707	-		IAI47_17575	0.29	+0.7
3,727,720	+		IAI47_17575	0.30	+0.4
3,727,720	+		IAI47_17575	0.30	+0.2
3,727,720	+		IAI47_17575	0.30	-0.7
3,727,721	-		IAI47_17575	0.31	+0.9
3,727,721	-		IAI47_17575	0.31	-0.5
3,727,721	-		IAI47_17575	0.31	-0.6
3,727,721	-		IAI47_17575	0.31	+0.9
3,727,721	-		IAI47_17575	0.31	-0.5
3,727,721	-		IAI47_17575	0.31	+0.3
3,727,721	-		IAI47_17575	0.31	-2.0
3,727,721	-		IAI47_17575	0.31	-1.9
3,727,721	-		IAI47_17575	0.31	-0.9
3,727,748	-		IAI47_17575	0.33	-2.0
3,727,765	+		IAI47_17575	0.34	-0.2
3,727,765	+		IAI47_17575	0.34	+0.1
3,727,837	+		IAI47_17575	0.40	+3.4
3,727,837	+		IAI47_17575	0.40	-1.6
3,727,837	+		IAI47_17575	0.40	+0.3
3,727,837	+		IAI47_17575	0.40	-0.9
3,727,837	+		IAI47_17575	0.40	-2.0
3,727,837	+		IAI47_17575	0.40	+0.2
3,727,837	+		IAI47_17575	0.40	+2.2
3,727,838	-		IAI47_17575	0.40	-0.9
3,727,880	+		IAI47_17575	0.43	-1.0