Strain Fitness in Pantoea sp. MT58 around IAI47_15710

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,311,353	-		IAI47_15700	0.83	-0.9
3,311,354	+		IAI47_15700	0.83	-2.3
3,311,354	+		IAI47_15700	0.83	-1.5
3,311,354	+		IAI47_15700	0.83	-1.6
3,311,354	+		IAI47_15700	0.83	-3.2
3,311,354	+		IAI47_15700	0.83	-1.1
3,311,354	+		IAI47_15700	0.83	-3.3
3,311,354	+		IAI47_15700	0.83	-3.3
3,311,354	+		IAI47_15700	0.83	-2.4
3,311,354	+		IAI47_15700	0.83	-3.4
3,311,355	-		IAI47_15700	0.83	-2.9
3,311,355	-		IAI47_15700	0.83	-3.5
3,311,355	-		IAI47_15700	0.83	-1.3
3,311,355	-		IAI47_15700	0.83	-2.3
3,311,376	+		IAI47_15700	0.85	-1.4
3,311,418	+		IAI47_15700	0.87	-1.3
3,311,420	+		IAI47_15700	0.87	-2.2
3,311,420	+		IAI47_15700	0.87	-3.5
3,311,420	+		IAI47_15700	0.87	-3.8
3,311,420	+		IAI47_15700	0.87	-2.9
3,311,421	-		IAI47_15700	0.87	-3.5
3,311,421	-		IAI47_15700	0.87	-2.9
3,311,483	+				-2.6
3,311,483	+				-2.0
3,311,483	+				-2.7
3,311,483	+				-1.8
3,311,484	-				-1.4
3,311,484	-				-2.7
3,311,484	-				-1.6
3,311,484	-				-3.8
3,311,484	-				-3.2
3,311,661	-				-2.8
3,311,745	-				+1.8
3,311,745	-				-0.1
3,311,762	+				+0.8
3,311,762	+				+0.5
3,311,762	+				+1.3
3,311,762	+				+1.7
3,311,762	+				+0.1
3,311,763	-				+0.0
3,311,763	-				-0.1
3,311,763	-				-2.0
3,311,763	-				-0.7
3,311,763	-				+0.7
3,311,763	-				-1.6
3,311,771	+				+1.3
3,311,771	+				+0.6
3,311,772	-				+0.8
3,311,786	+				-1.0
3,311,786	+				+2.1
3,311,787	-				+1.8
3,311,787	-				+2.1
3,311,787	-				+1.3
3,311,806	+				-1.7
3,311,806	+				+1.7
3,311,806	+				+2.3
3,311,806	+				+1.7
3,311,807	-				+1.0
3,311,807	-				-0.1
3,311,807	-				-0.3
3,311,807	-				+2.1
3,311,807	-				+2.5
3,311,818	+				+1.1
3,311,818	+				+1.4
3,311,818	+				-2.5
3,311,819	-				+0.5
3,311,924	+		IAI47_15705	0.34	+0.8
3,312,015	+		IAI47_15705	0.60	+0.4
3,312,015	+		IAI47_15705	0.60	-0.4
3,312,019	+		IAI47_15705	0.61	-0.4
3,312,020	-		IAI47_15705	0.61	-0.3
3,312,023	+		IAI47_15705	0.62	+0.1
3,312,023	+		IAI47_15705	0.62	-0.9
3,312,023	+		IAI47_15705	0.62	-2.0
3,312,024	-		IAI47_15705	0.62	+0.2
3,312,024	-		IAI47_15705	0.62	-2.5
3,312,024	-		IAI47_15705	0.62	+1.3
3,312,032	+		IAI47_15705	0.65	+0.4
3,312,032	+		IAI47_15705	0.65	-1.4
3,312,032	+		IAI47_15705	0.65	+0.4
3,312,032	+		IAI47_15705	0.65	-0.6
3,312,032	+		IAI47_15705	0.65	-0.4
3,312,032	+		IAI47_15705	0.65	-0.2
3,312,032	+		IAI47_15705	0.65	+0.4
3,312,033	-		IAI47_15705	0.65	+0.1
3,312,033	-		IAI47_15705	0.65	-0.8
3,312,033	-		IAI47_15705	0.65	-1.2
3,312,033	-		IAI47_15705	0.65	-0.1
3,312,033	-		IAI47_15705	0.65	+0.3
3,312,033	-		IAI47_15705	0.65	-2.2
3,312,058	+		IAI47_15705	0.72	+0.0
3,312,058	+		IAI47_15705	0.72	-2.2
3,312,058	+		IAI47_15705	0.72	-1.4
3,312,058	+		IAI47_15705	0.72	-1.2
3,312,058	+		IAI47_15705	0.72	+0.3
3,312,058	+		IAI47_15705	0.72	-1.3
3,312,058	+		IAI47_15705	0.72	-2.3
3,312,059	-		IAI47_15705	0.72	+0.3
3,312,059	-		IAI47_15705	0.72	+1.1
3,312,059	-		IAI47_15705	0.72	+0.4
3,312,059	-		IAI47_15705	0.72	+0.7
3,312,059	-		IAI47_15705	0.72	+1.9
3,312,059	-		IAI47_15705	0.72	-0.0
3,312,059	-		IAI47_15705	0.72	-1.9
3,312,062	+		IAI47_15705	0.73	-0.6
3,312,062	+		IAI47_15705	0.73	+3.1
3,312,063	-		IAI47_15705	0.74	-0.6
3,312,097	+		IAI47_15705	0.83	-0.9
3,312,106	+		IAI47_15705	0.86	+0.2
3,312,107	-		IAI47_15705	0.86	-0.9
3,312,143	+				+0.8
3,312,143	+				-0.8
3,312,143	+				-0.7
3,312,152	+				+1.1
3,312,152	+				-0.5
3,312,152	+				-1.0
3,312,153	-				-0.5
3,312,153	-				+1.3
3,312,153	-				+1.2
3,312,205	+				-1.5
3,312,205	+				-1.2
3,312,205	+				-0.3
3,312,205	+				+1.6
3,312,205	+				+0.7
3,312,205	+				-1.4
3,312,205	+				-1.7
3,312,205	+				+0.7
3,312,206	-				+0.4
3,312,206	-				+1.3
3,312,206	-				+1.0
3,312,206	-				+0.4
3,312,206	-				+1.3
3,312,206	-				-0.7
3,312,206	-				-2.0
3,312,209	+				-0.5
3,312,209	+				+1.2
3,312,209	+				+1.4
3,312,209	+				+1.3
3,312,209	+				+0.3
3,312,209	+				+0.0
3,312,209	+				+0.0
3,312,209	+				+0.8
3,312,209	+				-0.3
3,312,209	+				+0.2
3,312,209	+				-0.6
3,312,209	+				+3.1
3,312,210	-				-1.1
3,312,210	-				+1.2
3,312,210	-				+1.9
3,312,210	-				+0.4
3,312,210	-				-0.1
3,312,210	-				+0.2
3,312,210	-				+1.3
3,312,210	-				-0.5
3,312,210	-				+0.2
3,312,210	-				+1.4
3,312,278	+				+1.1
3,312,278	+				+0.9
3,312,278	+				+0.5
3,312,279	-				+1.4
3,312,309	-				+0.1
3,312,309	-				+1.1
3,312,309	-				+0.7
3,312,309	-				+0.1
3,312,319	-				+1.1
3,312,333	-				-1.3
3,312,360	+		IAI47_15710	0.12	+1.1
3,312,361	-		IAI47_15710	0.12	+0.4
3,312,394	+		IAI47_15710	0.16	+2.4
3,312,394	+		IAI47_15710	0.16	-0.3
3,312,394	+		IAI47_15710	0.16	+0.5
3,312,394	+		IAI47_15710	0.16	+1.3
3,312,439	+		IAI47_15710	0.21	-2.5
3,312,439	+		IAI47_15710	0.21	+0.8
3,312,439	+		IAI47_15710	0.21	+2.4
3,312,440	-		IAI47_15710	0.21	+1.6
3,312,443	+		IAI47_15710	0.22	+1.0
3,312,443	+		IAI47_15710	0.22	+0.5
3,312,540	+		IAI47_15710	0.33	+0.5
3,312,540	+		IAI47_15710	0.33	-0.2
3,312,540	+		IAI47_15710	0.33	-1.0
3,312,540	+		IAI47_15710	0.33	+0.3
3,312,541	-		IAI47_15710	0.33	+1.7
3,312,568	+		IAI47_15710	0.36	-1.6
3,312,569	-		IAI47_15710	0.36	-2.0
3,312,571	+		IAI47_15710	0.36	+2.7
3,312,571	+		IAI47_15710	0.36	+1.6
3,312,571	+		IAI47_15710	0.36	-1.7
3,312,571	+		IAI47_15710	0.36	-0.9
3,312,571	+		IAI47_15710	0.36	-0.6
3,312,571	+		IAI47_15710	0.36	-0.3
3,312,571	+		IAI47_15710	0.36	-1.7
3,312,572	-		IAI47_15710	0.36	-1.9
3,312,572	-		IAI47_15710	0.36	+2.4
3,312,572	-		IAI47_15710	0.36	+1.4
3,312,572	-		IAI47_15710	0.36	-2.3
3,312,572	-		IAI47_15710	0.36	-1.2
3,312,572	-		IAI47_15710	0.36	+2.2
3,312,572	-		IAI47_15710	0.36	+0.3
3,312,597	+		IAI47_15710	0.39	-0.6
3,312,614	+		IAI47_15710	0.41	+2.5
3,312,614	+		IAI47_15710	0.41	-0.4
3,312,615	-		IAI47_15710	0.41	-0.6
3,312,615	-		IAI47_15710	0.41	-2.8
3,312,615	-		IAI47_15710	0.41	-0.4
3,312,641	+		IAI47_15710	0.44	-0.2
3,312,641	+		IAI47_15710	0.44	+2.0
3,312,642	-		IAI47_15710	0.45	+0.8
3,312,642	-		IAI47_15710	0.45	-1.9
3,312,642	-		IAI47_15710	0.45	-0.3
3,312,642	-		IAI47_15710	0.45	-0.2
3,312,659	-		IAI47_15710	0.47	+1.1
3,312,659	-		IAI47_15710	0.47	+0.8
3,312,683	-		IAI47_15710	0.49	+2.4
3,312,683	-		IAI47_15710	0.49	+2.0
3,312,733	+		IAI47_15710	0.55	-1.4
3,312,733	+		IAI47_15710	0.55	+0.0
3,312,733	+		IAI47_15710	0.55	-0.4
3,312,733	+		IAI47_15710	0.55	-0.6
3,312,766	+		IAI47_15710	0.59	-0.2
3,312,767	-		IAI47_15710	0.59	+1.8
3,312,767	-		IAI47_15710	0.59	-2.0
3,312,780	-		IAI47_15710	0.61	+0.2
3,312,890	+		IAI47_15710	0.73	-1.1
3,312,891	-		IAI47_15710	0.73	+2.0
3,312,933	-		IAI47_15710	0.78	-0.7
3,312,935	+		IAI47_15710	0.78	+0.9
3,312,935	+		IAI47_15710	0.78	+1.0
3,312,936	-		IAI47_15710	0.79	-0.2
3,312,943	+		IAI47_15710	0.79	-1.0
3,312,943	+		IAI47_15710	0.79	+0.8
3,312,944	-		IAI47_15710	0.80	-0.3
3,312,944	-		IAI47_15710	0.80	+1.6
3,312,946	+		IAI47_15710	0.80	-0.8
3,312,946	+		IAI47_15710	0.80	+1.5
3,312,947	-		IAI47_15710	0.80	+2.6
3,312,947	-		IAI47_15710	0.80	-2.6
3,312,947	-		IAI47_15710	0.80	-0.8
3,312,947	-		IAI47_15710	0.80	-2.5
3,312,970	+		IAI47_15710	0.83	+1.2
3,312,970	+		IAI47_15710	0.83	+1.1
3,313,043	+				+0.2
3,313,044	-				-0.4
3,313,046	+				+0.2
3,313,046	+				-1.3
3,313,046	+				+0.8
3,313,046	+				+3.4
3,313,047	-				-1.1
3,313,047	-				-1.7
3,313,047	-				-0.2
3,313,047	-				+0.6
3,313,088	+				-1.6
3,313,088	+				+1.5
3,313,088	+				+2.6
3,313,089	-				-0.6
3,313,089	-				+1.6
3,313,089	-				+0.4
3,313,089	-				+0.9
3,313,089	-				-1.1
3,313,132	+				-0.5
3,313,141	-				+0.6
3,313,164	+				+0.7
3,313,164	+				+2.2
3,313,164	+				+1.7
3,313,164	+				+2.5
3,313,164	+				+0.1
3,313,165	-				-0.1
3,313,178	-				-0.2
3,313,208	+				+0.5
3,313,208	+				+1.9
3,313,208	+				-2.0
3,313,208	+				-1.1
3,313,208	+				+1.9
3,313,209	-				+1.2
3,313,209	-				-2.0
3,313,209	-				+0.3
3,313,209	-				-1.5
3,313,209	-				-1.8
3,313,213	+				-0.3
3,313,250	+		IAI47_15715	0.13	+2.0
3,313,250	+		IAI47_15715	0.13	+1.3
3,313,250	+		IAI47_15715	0.13	+0.3
3,313,250	+		IAI47_15715	0.13	+1.4
3,313,250	+		IAI47_15715	0.13	+0.8
3,313,251	-		IAI47_15715	0.13	-1.0
3,313,251	-		IAI47_15715	0.13	+1.1
3,313,251	-		IAI47_15715	0.13	-0.4
3,313,251	-		IAI47_15715	0.13	-0.4
3,313,251	-		IAI47_15715	0.13	-1.6
3,313,260	-		IAI47_15715	0.14	+1.6
3,313,274	+		IAI47_15715	0.16	+0.6
3,313,274	+		IAI47_15715	0.16	+0.3
3,313,274	+		IAI47_15715	0.16	+0.2
3,313,274	+		IAI47_15715	0.16	+0.6
3,313,274	+		IAI47_15715	0.16	+1.2
3,313,274	+		IAI47_15715	0.16	+1.0
3,313,275	-		IAI47_15715	0.16	-1.5
3,313,275	-		IAI47_15715	0.16	+1.9
3,313,275	-		IAI47_15715	0.16	+0.9
3,313,275	-		IAI47_15715	0.16	-0.6
3,313,275	-		IAI47_15715	0.16	-0.5
3,313,275	-		IAI47_15715	0.16	-1.8
3,313,275	-		IAI47_15715	0.16	-2.8
3,313,275	-		IAI47_15715	0.16	-2.3
3,313,276	+		IAI47_15715	0.16	+0.5
3,313,276	+		IAI47_15715	0.16	+2.0
3,313,276	+		IAI47_15715	0.16	-0.7
3,313,276	+		IAI47_15715	0.16	-0.8
3,313,276	+		IAI47_15715	0.16	+1.1
3,313,276	+		IAI47_15715	0.16	-1.1
3,313,276	+		IAI47_15715	0.16	+2.2
3,313,277	-		IAI47_15715	0.16	+1.4
3,313,277	-		IAI47_15715	0.16	+0.6
3,313,277	-		IAI47_15715	0.16	+0.5
3,313,277	-		IAI47_15715	0.16	+1.6
3,313,277	-		IAI47_15715	0.16	+0.6
3,313,277	-		IAI47_15715	0.16	+2.6
3,313,277	-		IAI47_15715	0.16	+0.9
3,313,277	-		IAI47_15715	0.16	-1.3
3,313,322	-		IAI47_15715	0.21	-0.7
3,313,331	-		IAI47_15715	0.23	-2.0
3,313,358	+		IAI47_15715	0.26	+0.8
3,313,358	+		IAI47_15715	0.26	-0.7
3,313,359	-		IAI47_15715	0.26	+0.3
3,313,418	+		IAI47_15715	0.33	+0.8
3,313,420	+		IAI47_15715	0.34	-0.1
3,313,421	-		IAI47_15715	0.34	+0.4
3,313,421	-		IAI47_15715	0.34	-0.6
3,313,421	-		IAI47_15715	0.34	-3.4
3,313,421	-		IAI47_15715	0.34	+1.4
3,313,427	-		IAI47_15715	0.34	-2.2
3,313,427	-		IAI47_15715	0.34	-0.7
3,313,462	-		IAI47_15715	0.39	+0.0
3,313,486	+		IAI47_15715	0.42	+0.5
3,313,486	+		IAI47_15715	0.42	+0.5
3,313,486	+		IAI47_15715	0.42	-1.1
3,313,486	+		IAI47_15715	0.42	+0.5
3,313,486	+		IAI47_15715	0.42	+1.1
3,313,487	-		IAI47_15715	0.42	+0.4
3,313,487	-		IAI47_15715	0.42	+1.2
3,313,487	-		IAI47_15715	0.42	-0.5
3,313,487	-		IAI47_15715	0.42	+0.2
3,313,498	+		IAI47_15715	0.43	-1.7
3,313,498	+		IAI47_15715	0.43	-2.4
3,313,498	+		IAI47_15715	0.43	+1.6
3,313,498	+		IAI47_15715	0.43	+1.1
3,313,498	+		IAI47_15715	0.43	+1.2
3,313,498	+		IAI47_15715	0.43	+1.0
3,313,498	+		IAI47_15715	0.43	+0.1
3,313,498	+		IAI47_15715	0.43	+2.9
3,313,498	+		IAI47_15715	0.43	+1.2
3,313,498	+		IAI47_15715	0.43	+1.3
3,313,498	+		IAI47_15715	0.43	+0.9
3,313,498	+		IAI47_15715	0.43	-0.9
3,313,498	+		IAI47_15715	0.43	+0.1
3,313,498	+		IAI47_15715	0.43	-0.2
3,313,498	+		IAI47_15715	0.43	-0.8
3,313,498	+		IAI47_15715	0.43	+0.6
3,313,499	-		IAI47_15715	0.43	-0.1
3,313,499	-		IAI47_15715	0.43	-1.5
3,313,499	-		IAI47_15715	0.43	-0.4
3,313,499	-		IAI47_15715	0.43	+1.1
3,313,499	-		IAI47_15715	0.43	+0.3
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