Strain Fitness in Pantoea sp. MT58 around IAI47_14995

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,161,014	+		IAI47_14985	0.27	-1.1
3,161,015	-		IAI47_14985	0.27	-1.9
3,161,064	+		IAI47_14985	0.43	-1.2
3,161,064	+		IAI47_14985	0.43	+1.2
3,161,064	+		IAI47_14985	0.43	-0.2
3,161,064	+		IAI47_14985	0.43	+0.7
3,161,082	+		IAI47_14985	0.48	+2.3
3,161,082	+		IAI47_14985	0.48	+0.4
3,161,210	+		IAI47_14985	0.89	+2.1
3,161,210	+		IAI47_14985	0.89	+0.0
3,161,211	-		IAI47_14985	0.89	+0.8
3,161,211	-		IAI47_14985	0.89	-1.0
3,161,211	-		IAI47_14985	0.89	-0.2
3,161,211	-		IAI47_14985	0.89	+1.2
3,161,235	-				+0.3
3,161,306	+				-1.6
3,161,306	+				+1.7
3,161,322	+				-0.2
3,161,322	+				+0.2
3,161,322	+				-0.6
3,161,322	+				-1.2
3,161,322	+				+2.7
3,161,322	+				-0.1
3,161,322	+				-1.5
3,161,322	+				+2.2
3,161,323	-				+0.9
3,161,323	-				-0.3
3,161,323	-				+0.1
3,161,323	-				-0.8
3,161,323	-				+2.1
3,161,326	+				-0.0
3,161,326	+				-0.6
3,161,326	+				+0.3
3,161,326	+				+0.6
3,161,326	+				-0.2
3,161,326	+				-1.6
3,161,326	+				-0.9
3,161,326	+				+0.6
3,161,326	+				+0.4
3,161,326	+				-1.1
3,161,327	-				+0.1
3,161,327	-				-0.6
3,161,327	-				-0.8
3,161,327	-				-1.3
3,161,327	-				-1.1
3,161,327	-				+0.7
3,161,327	-				+0.2
3,161,327	-				-0.0
3,161,327	-				+2.4
3,161,327	-				-0.1
3,161,327	-				+1.0
3,161,327	-				+0.7
3,161,327	-				+0.2
3,161,327	-				+0.8
3,161,327	-				+0.8
3,161,327	-				-0.1
3,161,327	-				+0.8
3,161,327	-				+0.2
3,161,327	-				+0.7
3,161,327	-				+1.5
3,161,361	+				-0.6
3,161,362	-				-3.2
3,161,362	-				-1.2
3,161,362	-				-1.8
3,161,362	-				-0.4
3,161,378	-				+1.1
3,161,388	+				+2.6
3,161,389	-				-2.8
3,161,389	-				-1.9
3,161,389	-				+1.1
3,161,389	-				-0.1
3,161,389	-				+0.7
3,161,389	-				+0.4
3,161,414	+				+0.2
3,161,414	+				+0.3
3,161,415	-				+0.1
3,161,427	+				+0.9
3,161,439	+		IAI47_14990	0.12	+0.2
3,161,469	+		IAI47_14990	0.22	+0.6
3,161,469	+		IAI47_14990	0.22	+1.2
3,161,470	-		IAI47_14990	0.22	+1.8
3,161,493	+		IAI47_14990	0.30	-1.2
3,161,493	+		IAI47_14990	0.30	-1.2
3,161,493	+		IAI47_14990	0.30	+1.8
3,161,494	-		IAI47_14990	0.30	+1.3
3,161,494	-		IAI47_14990	0.30	+0.5
3,161,495	+		IAI47_14990	0.31	-0.9
3,161,496	-		IAI47_14990	0.31	-0.0
3,161,496	-		IAI47_14990	0.31	+2.2
3,161,496	-		IAI47_14990	0.31	-0.8
3,161,496	-		IAI47_14990	0.31	+0.1
3,161,560	-		IAI47_14990	0.53	-0.8
3,161,560	-		IAI47_14990	0.53	-1.1
3,161,560	-		IAI47_14990	0.53	-0.9
3,161,561	+		IAI47_14990	0.53	+0.6
3,161,561	+		IAI47_14990	0.53	+1.3
3,161,561	+		IAI47_14990	0.53	+1.3
3,161,561	+		IAI47_14990	0.53	-1.1
3,161,561	+		IAI47_14990	0.53	-1.3
3,161,561	+		IAI47_14990	0.53	+0.5
3,161,561	+		IAI47_14990	0.53	+1.2
3,161,561	+		IAI47_14990	0.53	+0.4
3,161,561	+		IAI47_14990	0.53	+1.5
3,161,562	-		IAI47_14990	0.53	-0.1
3,161,562	-		IAI47_14990	0.53	+1.9
3,161,562	-		IAI47_14990	0.53	+1.0
3,161,562	-		IAI47_14990	0.53	+2.6
3,161,562	-		IAI47_14990	0.53	+2.3
3,161,562	-		IAI47_14990	0.53	+0.5
3,161,562	-		IAI47_14990	0.53	-0.7
3,161,562	-		IAI47_14990	0.53	-0.5
3,161,671	+				+0.4
3,161,704	+				+1.2
3,161,704	+				-1.3
3,161,705	-				+0.3
3,161,705	-				-1.5
3,161,705	-				+1.4
3,161,705	-				-0.1
3,161,723	+				-0.7
3,161,724	-				+1.4
3,161,724	-				-2.7
3,161,724	-				+0.5
3,161,724	-				-1.1
3,161,724	-				-1.9
3,161,724	-				-1.2
3,161,724	-				+0.9
3,161,724	-				+0.8
3,161,724	-				-2.0
3,161,724	-				+0.3
3,161,742	-				-0.4
3,161,742	-				+1.9
3,161,771	+				-1.0
3,161,771	+				+1.0
3,161,771	+				+0.1
3,161,772	-				-0.2
3,161,772	-				+1.2
3,161,778	+				+0.2
3,161,778	+				+1.1
3,161,779	-				+0.3
3,161,798	+				-0.1
3,161,799	-				-0.2
3,161,872	-				-1.2
3,161,914	+				-0.5
3,161,915	-				+0.3
3,161,915	-				+0.2
3,161,927	+				-0.3
3,161,950	+				+0.8
3,161,950	+				-1.0
3,161,950	+				-0.1
3,161,950	+				-1.4
3,161,951	-				-1.2
3,161,979	+				-0.5
3,162,060	+				+0.1
3,162,060	+				-0.3
3,162,060	+				+0.8
3,162,060	+				-2.2
3,162,061	-				-1.8
3,162,061	-				-1.4
3,162,061	-				+0.5
3,162,092	+				+0.6
3,162,093	-				-0.8
3,162,093	-				+1.5
3,162,102	-				+2.4
3,162,102	-				+2.1
3,162,102	-				+0.8
3,162,265	-		IAI47_14995	0.11	-0.2
3,162,279	+		IAI47_14995	0.12	-0.9
3,162,327	-		IAI47_14995	0.13	-0.8
3,162,370	+		IAI47_14995	0.15	+1.5
3,162,370	+		IAI47_14995	0.15	+0.9
3,162,371	-		IAI47_14995	0.15	+1.8
3,162,479	+		IAI47_14995	0.19	-2.2
3,162,480	-		IAI47_14995	0.19	-0.4
3,162,481	+		IAI47_14995	0.19	+1.1
3,162,481	+		IAI47_14995	0.19	-0.0
3,162,481	+		IAI47_14995	0.19	+1.6
3,162,481	+		IAI47_14995	0.19	+0.7
3,162,481	+		IAI47_14995	0.19	-1.1
3,162,481	+		IAI47_14995	0.19	-0.2
3,162,481	+		IAI47_14995	0.19	+1.2
3,162,481	+		IAI47_14995	0.19	+0.1
3,162,481	+		IAI47_14995	0.19	+2.2
3,162,482	-		IAI47_14995	0.19	+1.2
3,162,482	-		IAI47_14995	0.19	-0.5
3,162,482	-		IAI47_14995	0.19	+0.4
3,162,482	-		IAI47_14995	0.19	-0.7
3,162,482	-		IAI47_14995	0.19	+0.7
3,162,495	+		IAI47_14995	0.20	+2.2
3,162,496	-		IAI47_14995	0.20	+1.3
3,162,496	-		IAI47_14995	0.20	+0.4
3,162,693	+		IAI47_14995	0.27	+0.6
3,162,693	+		IAI47_14995	0.27	-2.7
3,162,693	+		IAI47_14995	0.27	-0.2
3,162,694	-		IAI47_14995	0.27	+0.8
3,162,694	-		IAI47_14995	0.27	+0.3
3,162,754	+		IAI47_14995	0.30	+2.2
3,162,786	+		IAI47_14995	0.31	-2.1
3,162,786	+		IAI47_14995	0.31	-0.1
3,162,787	-		IAI47_14995	0.31	+0.3
3,162,787	-		IAI47_14995	0.31	-1.0
3,162,835	+		IAI47_14995	0.33	-0.5
3,162,835	+		IAI47_14995	0.33	+2.1
3,162,836	-		IAI47_14995	0.33	-0.5
3,162,836	-		IAI47_14995	0.33	+0.7
3,162,907	+		IAI47_14995	0.36	-0.2
3,162,907	+		IAI47_14995	0.36	+3.7
3,162,907	+		IAI47_14995	0.36	+1.7
3,162,907	+		IAI47_14995	0.36	-0.2
3,162,908	-		IAI47_14995	0.36	-2.0
3,162,908	-		IAI47_14995	0.36	-0.9
3,162,908	-		IAI47_14995	0.36	-1.0
3,162,908	-		IAI47_14995	0.36	+1.8
3,162,908	-		IAI47_14995	0.36	-1.0
3,162,908	-		IAI47_14995	0.36	-1.5
3,162,908	-		IAI47_14995	0.36	-2.0
3,162,912	+		IAI47_14995	0.36	+2.3
3,162,912	+		IAI47_14995	0.36	+0.3
3,162,913	-		IAI47_14995	0.36	-0.4
3,162,913	-		IAI47_14995	0.36	-0.6
3,163,004	+		IAI47_14995	0.39	-0.0
3,163,004	+		IAI47_14995	0.39	-0.5
3,163,005	-		IAI47_14995	0.39	-0.8
3,163,005	-		IAI47_14995	0.39	+1.0
3,163,005	-		IAI47_14995	0.39	+1.5
3,163,005	-		IAI47_14995	0.39	+1.6
3,163,005	-		IAI47_14995	0.39	+0.6
3,163,005	-		IAI47_14995	0.39	-0.0
3,163,007	+		IAI47_14995	0.40	+2.4
3,163,008	-		IAI47_14995	0.40	-0.1
3,163,008	-		IAI47_14995	0.40	+0.5
3,163,008	-		IAI47_14995	0.40	-2.3
3,163,009	-		IAI47_14995	0.40	+2.1
3,163,060	+		IAI47_14995	0.42	+1.0
3,163,060	+		IAI47_14995	0.42	-0.3
3,163,060	+		IAI47_14995	0.42	+0.3
3,163,061	-		IAI47_14995	0.42	+2.4
3,163,083	-		IAI47_14995	0.42	-0.4
3,163,083	-		IAI47_14995	0.42	+0.1
3,163,083	-		IAI47_14995	0.42	-1.6
3,163,083	-		IAI47_14995	0.42	+0.2
3,163,083	-		IAI47_14995	0.42	-1.2
3,163,129	+		IAI47_14995	0.44	+1.4
3,163,190	+		IAI47_14995	0.47	-0.2
3,163,202	+		IAI47_14995	0.47	-0.8
3,163,203	-		IAI47_14995	0.47	+1.0
3,163,203	-		IAI47_14995	0.47	+1.6
3,163,294	+		IAI47_14995	0.51	-0.2
3,163,295	-		IAI47_14995	0.51	-1.4
3,163,306	+		IAI47_14995	0.51	-0.1
3,163,307	-		IAI47_14995	0.51	+0.7
3,163,307	-		IAI47_14995	0.51	+0.9
3,163,318	+		IAI47_14995	0.51	-2.6
3,163,519	+		IAI47_14995	0.59	+1.6
3,163,519	+		IAI47_14995	0.59	-0.8
3,163,519	+		IAI47_14995	0.59	+0.7
3,163,520	-		IAI47_14995	0.59	+0.8
3,163,520	-		IAI47_14995	0.59	-0.9
3,163,520	-		IAI47_14995	0.59	-0.0
3,163,520	-		IAI47_14995	0.59	+1.6
3,163,520	-		IAI47_14995	0.59	-1.1
3,163,520	-		IAI47_14995	0.59	+0.5
3,163,540	+		IAI47_14995	0.60	+0.6
3,163,540	+		IAI47_14995	0.60	-1.5
3,163,541	-		IAI47_14995	0.60	-1.5
3,163,560	+		IAI47_14995	0.61	+1.2
3,163,560	+		IAI47_14995	0.61	-0.2
3,163,560	+		IAI47_14995	0.61	+0.1
3,163,560	+		IAI47_14995	0.61	-0.5
3,163,560	+		IAI47_14995	0.61	+1.9
3,163,560	+		IAI47_14995	0.61	-1.1
3,163,561	-		IAI47_14995	0.61	-2.1
3,163,561	-		IAI47_14995	0.61	+0.1
3,163,561	-		IAI47_14995	0.61	+0.1
3,163,561	-		IAI47_14995	0.61	+0.6
3,163,561	-		IAI47_14995	0.61	-1.4
3,163,561	-		IAI47_14995	0.61	-0.2
3,163,565	+		IAI47_14995	0.61	+0.5
3,163,673	-		IAI47_14995	0.65	+1.6
3,163,693	+		IAI47_14995	0.66	-0.1
3,163,693	+				-0.8
3,163,693	+		IAI47_14995	0.66	+0.8
3,163,693	+		IAI47_14995	0.66	-1.4
3,163,694	-		IAI47_14995	0.66	-0.9
3,163,694	-		IAI47_14995	0.66	+1.0
3,163,694	-		IAI47_14995	0.66	-0.3
3,163,733	-		IAI47_14995	0.67	+2.8
3,163,736	+		IAI47_14995	0.68	+0.6
3,163,736	+		IAI47_14995	0.68	-2.1
3,163,737	-		IAI47_14995	0.68	-0.1
3,163,737	-		IAI47_14995	0.68	+2.7
3,163,737	-		IAI47_14995	0.68	+0.7
3,163,850	+		IAI47_14995	0.72	+1.2
3,163,851	-		IAI47_14995	0.72	-3.1
3,163,851	-		IAI47_14995	0.72	-1.2
3,163,851	-		IAI47_14995	0.72	-0.8
3,163,851	-		IAI47_14995	0.72	-0.1
3,163,851	-		IAI47_14995	0.72	+3.7
3,163,851	-		IAI47_14995	0.72	+0.7
3,163,851	-		IAI47_14995	0.72	+1.6
3,163,910	+		IAI47_14995	0.74	-1.8
3,163,910	+		IAI47_14995	0.74	+1.3
3,163,911	-		IAI47_14995	0.74	+2.9
3,163,938	-		IAI47_14995	0.75	-0.7
3,163,952	-		IAI47_14995	0.76	-0.1
3,163,967	+		IAI47_14995	0.76	+1.6
3,163,967	+		IAI47_14995	0.76	+0.8
3,163,967	+		IAI47_14995	0.76	+0.7
3,163,967	+		IAI47_14995	0.76	+0.8
3,163,968	-		IAI47_14995	0.76	+0.5
3,164,026	+		IAI47_14995	0.79	-0.3
3,164,027	-		IAI47_14995	0.79	+0.3
3,164,092	+				+0.7
3,164,092	+		IAI47_14995	0.81	-0.2
3,164,093	-		IAI47_14995	0.81	+1.0
3,164,093	-		IAI47_14995	0.81	+1.7
3,164,113	+		IAI47_14995	0.82	+2.8
3,164,113	+		IAI47_14995	0.82	-0.7
3,164,156	-		IAI47_14995	0.84	-1.8
3,164,156	-		IAI47_14995	0.84	-0.9
3,164,174	-		IAI47_14995	0.84	+0.2
3,164,200	+		IAI47_14995	0.85	+1.4
3,164,226	+		IAI47_14995	0.86	+0.0
3,164,226	+		IAI47_14995	0.86	-2.1
3,164,226	+		IAI47_14995	0.86	+1.9
3,164,227	-		IAI47_14995	0.86	-0.7
3,164,227	-		IAI47_14995	0.86	+0.9
3,164,227	-		IAI47_14995	0.86	+1.8
3,164,232	+		IAI47_14995	0.87	-0.0
3,164,232	+		IAI47_14995	0.87	-1.3
3,164,232	+		IAI47_14995	0.87	-1.2
3,164,232	+		IAI47_14995	0.87	+0.5
3,164,232	+		IAI47_14995	0.87	+0.5
3,164,232	+		IAI47_14995	0.87	+1.1
3,164,233	-		IAI47_14995	0.87	-0.8
3,164,233	-		IAI47_14995	0.87	+2.7
3,164,233	-		IAI47_14995	0.87	-2.1
3,164,242	-		IAI47_14995	0.87	-1.1
3,164,242	-		IAI47_14995	0.87	-1.3
3,164,242	-		IAI47_14995	0.87	+0.2
3,164,242	-		IAI47_14995	0.87	+1.8
3,164,242	-		IAI47_14995	0.87	+2.9
3,164,261	-		IAI47_14995	0.88	-1.5
3,164,331	+				-0.5
3,164,331	+				-0.0
3,164,349	-				+1.5
3,164,411	+				+1.3
3,164,412	-				-1.4
3,164,572	+				-1.1
3,164,572	+				-1.9
3,164,572	+				+2.9
3,164,582	+				-1.3
3,164,582	+				+0.4
3,164,582	+				+0.4
3,164,595	+				-0.0
3,164,595	+				-0.5
3,164,595	+				+2.2
3,164,596	-				-0.5
3,164,629	+				-0.5
3,164,630	-				+0.8
3,164,630	-				-1.1
3,164,630	-				-3.3
3,164,630	-				-0.6
3,164,653	+				-0.6
3,164,653	+				-1.7
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