Strain Fitness in Pantoea sp. MT58 around IAI47_13295

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,811,447	+		IAI47_13290	0.25	+1.2
2,811,447	+		IAI47_13290	0.25	-0.5
2,811,447	+		IAI47_13290	0.25	+0.2
2,811,447	+		IAI47_13290	0.25	+2.6
2,811,448	-		IAI47_13290	0.25	-1.7
2,811,448	-		IAI47_13290	0.25	-1.4
2,811,448	-		IAI47_13290	0.25	-0.0
2,811,479	+		IAI47_13290	0.28	+0.3
2,811,508	+		IAI47_13290	0.31	-1.6
2,811,557	+		IAI47_13290	0.36	-1.4
2,811,557	+		IAI47_13290	0.36	+1.5
2,811,557	+		IAI47_13290	0.36	-0.3
2,811,557	+		IAI47_13290	0.36	+0.5
2,811,557	+		IAI47_13290	0.36	+1.4
2,811,557	+		IAI47_13290	0.36	+1.4
2,811,558	-		IAI47_13290	0.36	-0.5
2,811,558	-		IAI47_13290	0.36	-1.7
2,811,558	-		IAI47_13290	0.36	-2.2
2,811,630	+		IAI47_13290	0.44	+0.7
2,811,630	+		IAI47_13290	0.44	+0.6
2,811,630	+		IAI47_13290	0.44	-0.4
2,811,630	+		IAI47_13290	0.44	-0.5
2,811,630	+		IAI47_13290	0.44	-0.4
2,811,630	+		IAI47_13290	0.44	+1.0
2,811,630	+		IAI47_13290	0.44	+0.3
2,811,631	-		IAI47_13290	0.44	-1.5
2,811,631	-		IAI47_13290	0.44	+0.1
2,811,631	-		IAI47_13290	0.44	+2.2
2,811,631	-		IAI47_13290	0.44	+0.7
2,811,631	-		IAI47_13290	0.44	+0.6
2,811,631	-		IAI47_13290	0.44	+1.3
2,811,631	-		IAI47_13290	0.44	-0.2
2,811,631	-		IAI47_13290	0.44	+0.4
2,811,706	-		IAI47_13290	0.51	-0.5
2,811,708	+		IAI47_13290	0.52	-1.2
2,811,708	+		IAI47_13290	0.52	-2.0
2,811,708	+		IAI47_13290	0.52	-0.3
2,811,709	-		IAI47_13290	0.52	-1.3
2,811,711	+		IAI47_13290	0.52	+0.9
2,811,711	+		IAI47_13290	0.52	-2.2
2,811,711	+		IAI47_13290	0.52	+2.3
2,811,711	+		IAI47_13290	0.52	-0.7
2,811,711	+		IAI47_13290	0.52	-0.1
2,811,712	-		IAI47_13290	0.52	+1.3
2,811,712	-		IAI47_13290	0.52	+1.1
2,811,712	-		IAI47_13290	0.52	-0.4
2,811,712	-		IAI47_13290	0.52	-2.6
2,811,772	+		IAI47_13290	0.58	+0.8
2,811,772	+		IAI47_13290	0.58	-1.2
2,811,772	+		IAI47_13290	0.58	-0.0
2,811,773	-		IAI47_13290	0.58	+1.0
2,811,773	-		IAI47_13290	0.58	+0.4
2,811,808	-		IAI47_13290	0.62	+0.2
2,811,808	-		IAI47_13290	0.62	+0.3
2,811,835	+		IAI47_13290	0.65	-0.2
2,811,835	+		IAI47_13290	0.65	-1.7
2,811,835	+		IAI47_13290	0.65	-0.8
2,811,835	+		IAI47_13290	0.65	+0.4
2,811,836	-		IAI47_13290	0.65	-0.8
2,811,836	-		IAI47_13290	0.65	-0.5
2,811,836	-		IAI47_13290	0.65	-1.4
2,811,836	-		IAI47_13290	0.65	-0.6
2,811,836	-		IAI47_13290	0.65	-1.7
2,811,836	-		IAI47_13290	0.65	+0.2
2,811,914	+		IAI47_13290	0.73	-0.6
2,811,915	-		IAI47_13290	0.73	+0.4
2,811,915	-		IAI47_13290	0.73	+0.3
2,811,915	-		IAI47_13290	0.73	+1.0
2,811,989	+		IAI47_13290	0.81	+2.5
2,811,989	+		IAI47_13290	0.81	+1.1
2,811,990	-		IAI47_13290	0.81	+0.6
2,811,990	-		IAI47_13290	0.81	-0.5
2,812,027	-		IAI47_13290	0.85	-0.2
2,812,027	-		IAI47_13290	0.85	-0.7
2,812,027	-		IAI47_13290	0.85	-1.3
2,812,027	-		IAI47_13290	0.85	-0.6
2,812,091	+				-0.4
2,812,091	+				-0.9
2,812,092	-				-0.3
2,812,092	-				+1.4
2,812,092	-				-2.1
2,812,155	+				+0.7
2,812,156	-				+1.3
2,812,156	-				-0.7
2,812,164	+				+0.8
2,812,191	+				-1.4
2,812,192	-				+0.7
2,812,318	-				-1.2
2,812,320	+				-0.5
2,812,360	+				+3.7
2,812,360	+				+1.9
2,812,360	+				-0.4
2,812,360	+				-0.6
2,812,361	-				+0.4
2,812,361	-				+1.4
2,812,364	+				+0.4
2,812,478	+		IAI47_13295	0.13	-1.2
2,812,479	-		IAI47_13295	0.13	-2.5
2,812,479	-		IAI47_13295	0.13	-0.7
2,812,479	-		IAI47_13295	0.13	+1.6
2,812,479	-		IAI47_13295	0.13	+2.3
2,812,503	+		IAI47_13295	0.14	+0.9
2,812,541	+		IAI47_13295	0.16	+0.2
2,812,541	+		IAI47_13295	0.16	+1.6
2,812,541	+		IAI47_13295	0.16	-1.4
2,812,541	+		IAI47_13295	0.16	-0.1
2,812,541	+		IAI47_13295	0.16	-0.2
2,812,542	-		IAI47_13295	0.16	+1.4
2,812,610	+		IAI47_13295	0.19	-0.5
2,812,611	-		IAI47_13295	0.19	+1.4
2,812,884	+		IAI47_13295	0.31	-1.4
2,812,884	+		IAI47_13295	0.31	+0.8
2,812,884	+		IAI47_13295	0.31	+1.7
2,812,884	+		IAI47_13295	0.31	-1.3
2,812,884	+		IAI47_13295	0.31	-1.3
2,812,884	+		IAI47_13295	0.31	-0.0
2,812,885	-		IAI47_13295	0.31	+1.4
2,812,885	-		IAI47_13295	0.31	+0.6
2,812,885	-		IAI47_13295	0.31	-1.8
2,812,885	-		IAI47_13295	0.31	-1.7
2,812,885	-		IAI47_13295	0.31	-0.7
2,812,885	-		IAI47_13295	0.31	+0.9
2,812,892	+		IAI47_13295	0.32	+0.1
2,812,893	-		IAI47_13295	0.32	+1.2
2,812,893	-		IAI47_13295	0.32	-0.4
2,813,384	+		IAI47_13295	0.54	+0.8
2,813,385	-		IAI47_13295	0.54	+1.4
2,813,534	+		IAI47_13295	0.61	+0.7
2,813,534	+		IAI47_13295	0.61	-1.0
2,813,605	-		IAI47_13295	0.65	-0.2
2,813,631	+		IAI47_13295	0.66	-1.6
2,813,631	+		IAI47_13295	0.66	+2.0
2,813,631	+		IAI47_13295	0.66	+1.1
2,813,632	-		IAI47_13295	0.66	+0.9
2,813,632	-		IAI47_13295	0.66	+1.3
2,813,632	-		IAI47_13295	0.66	-0.1
2,813,767	+		IAI47_13295	0.72	-0.5
2,813,767	+		IAI47_13295	0.72	-2.3
2,813,767	+		IAI47_13295	0.72	-3.5
2,813,875	+		IAI47_13295	0.77	+1.2
2,813,875	+		IAI47_13295	0.77	+0.3
2,813,876	-		IAI47_13295	0.77	+3.4
2,813,953	+		IAI47_13295	0.81	+2.3
2,813,953	+		IAI47_13295	0.81	+0.0
2,813,953	+		IAI47_13295	0.81	+0.1
2,813,954	-		IAI47_13295	0.81	-1.4
2,813,954	-		IAI47_13295	0.81	+1.3
2,813,954	-		IAI47_13295	0.81	+1.6
2,813,954	-		IAI47_13295	0.81	-1.1
2,813,954	-		IAI47_13295	0.81	+0.4
2,813,954	-		IAI47_13295	0.81	-0.7
2,814,019	+		IAI47_13295	0.84	+0.6
2,814,020	-		IAI47_13295	0.84	+1.2
2,814,020	-		IAI47_13295	0.84	+0.5
2,814,045	-		IAI47_13295	0.85	+0.9
2,814,181	+				+0.4
2,814,182	-				-2.9
2,814,182	-				-1.7
2,814,182	-				+2.0
2,814,182	-				-1.4
2,814,194	+				-3.1
2,814,194	+				+1.1
2,814,195	-				-1.6
2,814,326	+				-1.7
2,814,326	+				+1.6
2,814,326	+				+1.6
2,814,327	-				-1.6
2,814,327	-				+0.8
2,814,328	+				+2.7
2,814,328	+				+0.0
2,814,328	+				-0.0
2,814,328	+				+2.3
2,814,329	-				+1.6
2,814,329	-				+0.7
2,814,329	-				+1.2
2,814,329	-				-0.2
2,814,329	-				+1.0
2,814,340	-				-2.0
2,814,340	-				-0.4
2,814,404	+				+0.8
2,814,417	+				+2.5
2,814,496	+				+0.4
2,814,496	+				+0.5
2,814,497	-				+1.8
2,814,497	-				+0.6
2,814,497	-				-2.8
2,814,511	+				-1.9
2,814,511	+				+0.6
2,814,511	+				-0.5
2,814,512	-				-2.0
2,814,512	-				+0.5
2,814,512	-				+0.1
2,814,516	+				+0.8
2,814,516	+				+1.0
2,814,516	+				+0.1
2,814,517	-				+1.8
2,814,517	-				-0.2
2,814,517	-				+1.3
2,814,517	-				+0.9
2,814,517	-				-0.4
2,814,517	-				-0.9
2,814,576	+		IAI47_13300	0.16	-0.4
2,814,599	-		IAI47_13300	0.20	-1.2
2,814,629	+		IAI47_13300	0.26	-0.2
2,814,779	+		IAI47_13300	0.55	-1.6
2,814,780	-		IAI47_13300	0.55	+0.9
2,814,780	-		IAI47_13300	0.55	+0.3
2,814,828	+		IAI47_13300	0.64	-0.4
2,814,829	-		IAI47_13300	0.64	-1.8
2,814,829	-		IAI47_13300	0.64	+0.6
2,814,908	+		IAI47_13300	0.80	+0.7
2,814,908	+		IAI47_13300	0.80	-1.5
2,814,908	+		IAI47_13300	0.80	+1.5
2,814,909	-		IAI47_13300	0.80	-0.9
2,814,945	+		IAI47_13300	0.87	-1.3
2,814,946	-		IAI47_13300	0.87	+0.1
2,814,999	+				-0.7
2,814,999	+				+1.1
2,814,999	+				-1.2
2,814,999	+				+0.2
2,814,999	+				-2.1
2,815,000	-				+0.7
2,815,000	-				-1.0
2,815,003	+				+0.5
2,815,003	+				-0.2
2,815,003	+				+2.1
2,815,003	+				-1.8
2,815,003	+				+0.5
2,815,003	+				+0.5
2,815,004	-				+0.0
2,815,004	-				-1.3
2,815,004	-				-0.3
2,815,004	-				+1.7
2,815,031	+				+0.7
2,815,032	-				-2.2
2,815,032	-				-0.1
2,815,032	-				+0.2
2,815,032	-				-0.2
2,815,032	-				+1.0
2,815,032	-				-0.6
2,815,032	-				+1.3
2,815,035	+				+0.9
2,815,035	+				-0.8
2,815,095	-		IAI47_13305	0.15	-0.9
2,815,095	-		IAI47_13305	0.15	+1.2
2,815,168	+		IAI47_13305	0.28	+0.5
2,815,168	+		IAI47_13305	0.28	-0.5
2,815,168	+		IAI47_13305	0.28	-1.7
2,815,168	+		IAI47_13305	0.28	+1.2
2,815,169	-		IAI47_13305	0.28	+1.4
2,815,169	-		IAI47_13305	0.28	+1.0
2,815,169	-		IAI47_13305	0.28	+1.3
2,815,275	-		IAI47_13305	0.47	-0.4
2,815,275	-		IAI47_13305	0.47	-0.3
2,815,275	-		IAI47_13305	0.47	+1.0
2,815,275	-		IAI47_13305	0.47	-0.8
2,815,275	-		IAI47_13305	0.47	+1.4
2,815,276	+		IAI47_13305	0.47	+1.5
2,815,276	+		IAI47_13305	0.47	+0.2
2,815,276	+		IAI47_13305	0.47	-0.0
2,815,276	+		IAI47_13305	0.47	+0.4
2,815,276	+		IAI47_13305	0.47	-1.2
2,815,276	+		IAI47_13305	0.47	+0.3
2,815,276	+		IAI47_13305	0.47	-0.4
2,815,276	+		IAI47_13305	0.47	+0.8
2,815,277	-		IAI47_13305	0.47	+0.0
2,815,277	-		IAI47_13305	0.47	+0.6
2,815,277	-		IAI47_13305	0.47	-1.3
2,815,277	-		IAI47_13305	0.47	-0.3
2,815,277	-		IAI47_13305	0.47	-0.0
2,815,277	-		IAI47_13305	0.47	+0.3
2,815,277	-		IAI47_13305	0.47	+0.1
2,815,277	-		IAI47_13305	0.47	+0.3
2,815,277	-		IAI47_13305	0.47	+0.5
2,815,277	-		IAI47_13305	0.47	-0.5
2,815,277	-		IAI47_13305	0.47	-1.4
2,815,277	-		IAI47_13305	0.47	-0.1
2,815,277	-		IAI47_13305	0.47	-1.7
2,815,277	-		IAI47_13305	0.47	-0.5
2,815,288	+		IAI47_13305	0.49	-2.3
2,815,289	-		IAI47_13305	0.49	+0.1