Strain Fitness in Pantoea sp. MT58 around IAI47_12670

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,663,332	+				-0.2
2,663,332	+				-1.1
2,663,390	+				+2.5
2,663,390	+				+1.7
2,663,390	+				+0.8
2,663,390	+				-0.3
2,663,391	-				+0.3
2,663,392	+				-1.0
2,663,392	+				+1.1
2,663,392	+				-1.2
2,663,392	+				-2.5
2,663,392	+				+1.3
2,663,393	-				-1.4
2,663,393	-				-0.2
2,663,418	-				+0.0
2,663,425	+				+1.3
2,663,425	+				+1.4
2,663,426	-				+1.2
2,663,475	+		IAI47_12665	0.35	-0.1
2,663,475	+		IAI47_12665	0.35	+0.8
2,663,475	+		IAI47_12665	0.35	-0.7
2,663,476	-		IAI47_12665	0.36	+1.0
2,663,476	-		IAI47_12665	0.36	+0.4
2,663,492	+		IAI47_12665	0.45	+0.9
2,663,492	+		IAI47_12665	0.45	-0.5
2,663,521	-		IAI47_12665	0.62	+2.0
2,663,521	-		IAI47_12665	0.62	-0.8
2,663,535	-		IAI47_12665	0.71	+2.5
2,663,583	+				-2.4
2,663,583	+				-0.6
2,663,583	+				-1.1
2,663,584	-				+0.8
2,663,601	+				+1.6
2,663,601	+				+0.5
2,663,601	+				-1.3
2,663,601	+				+1.8
2,663,601	+				-1.3
2,663,601	+				-1.3
2,663,602	-				+2.8
2,663,602	-				-0.2
2,663,602	-				+2.0
2,663,602	-				+1.0
2,663,602	-				-0.2
2,663,640	+				+2.1
2,663,640	+				-0.2
2,663,640	+				+0.9
2,663,657	+				-0.2
2,663,657	+				+0.6
2,663,657	+				+0.6
2,663,657	+				+0.8
2,663,658	-				+2.6
2,663,658	-				-0.2
2,663,658	-				-0.2
2,663,658	-				+0.3
2,663,665	-				-0.1
2,663,713	+				-0.0
2,663,726	-				-2.0
2,663,782	-				-2.1
2,663,845	+				-0.2
2,663,846	-				-0.5
2,663,846	-				-1.6
2,663,846	-				-0.9
2,663,846	-				+0.4
2,663,849	+				+1.7
2,663,850	-				+0.8
2,663,850	-				-1.7
2,663,858	+				-0.3
2,663,859	-				+0.9
2,663,864	+				-2.2
2,663,929	-		IAI47_12670	0.12	-0.0
2,663,929	-		IAI47_12670	0.12	-1.1
2,663,937	+		IAI47_12670	0.13	-2.0
2,663,937	+		IAI47_12670	0.13	-1.6
2,663,937	+		IAI47_12670	0.13	-0.3
2,663,938	-		IAI47_12670	0.13	-1.3
2,663,938	-		IAI47_12670	0.13	+0.1
2,663,938	-		IAI47_12670	0.13	-1.3
2,663,938	-		IAI47_12670	0.13	-1.2
2,663,938	-		IAI47_12670	0.13	+1.1
2,663,945	+		IAI47_12670	0.14	-1.2
2,663,945	+		IAI47_12670	0.14	+2.3
2,663,945	+		IAI47_12670	0.14	-0.4
2,663,945	+		IAI47_12670	0.14	-0.6
2,663,946	-		IAI47_12670	0.15	-2.0
2,663,946	-		IAI47_12670	0.15	-0.8
2,663,946	-		IAI47_12670	0.15	-1.0
2,663,946	-		IAI47_12670	0.15	-0.4
2,663,976	+		IAI47_12670	0.20	+0.6
2,663,976	+		IAI47_12670	0.20	+0.4
2,663,989	-		IAI47_12670	0.22	-0.2
2,663,989	-		IAI47_12670	0.22	+0.4
2,664,047	+		IAI47_12670	0.32	+0.6
2,664,047	+		IAI47_12670	0.32	-1.5
2,664,047	+		IAI47_12670	0.32	+0.9
2,664,047	+		IAI47_12670	0.32	-0.8
2,664,047	+		IAI47_12670	0.32	-0.7
2,664,078	+		IAI47_12670	0.38	-2.0
2,664,079	-		IAI47_12670	0.38	-0.7
2,664,084	+		IAI47_12670	0.39	+0.4
2,664,084	+		IAI47_12670	0.39	+0.0
2,664,085	-		IAI47_12670	0.39	+0.9
2,664,085	-		IAI47_12670	0.39	-2.8
2,664,085	-		IAI47_12670	0.39	-1.0
2,664,148	-		IAI47_12670	0.50	-0.3
2,664,198	+		IAI47_12670	0.59	-0.8
2,664,199	-		IAI47_12670	0.59	-0.4
2,664,199	-		IAI47_12670	0.59	-0.1
2,664,215	+		IAI47_12670	0.62	+0.5
2,664,215	+		IAI47_12670	0.62	+0.4
2,664,215	+		IAI47_12670	0.62	+2.2
2,664,215	+		IAI47_12670	0.62	-1.1
2,664,215	+		IAI47_12670	0.62	-1.2
2,664,215	+		IAI47_12670	0.62	+1.2
2,664,216	-		IAI47_12670	0.62	+1.2
2,664,216	-		IAI47_12670	0.62	+0.5
2,664,216	-		IAI47_12670	0.62	-0.2
2,664,216	-		IAI47_12670	0.62	+1.2
2,664,216	-		IAI47_12670	0.62	-1.8
2,664,216	-		IAI47_12670	0.62	+0.9
2,664,216	-		IAI47_12670	0.62	-1.4
2,664,216	-		IAI47_12670	0.62	+2.9
2,664,216	-		IAI47_12670	0.62	-0.8
2,664,216	-		IAI47_12670	0.62	+1.6
2,664,216	-		IAI47_12670	0.62	-1.4
2,664,216	-		IAI47_12670	0.62	+1.6
2,664,216	-		IAI47_12670	0.62	-1.1
2,664,236	+		IAI47_12670	0.65	+0.4
2,664,237	-		IAI47_12670	0.66	+2.1
2,664,261	-		IAI47_12670	0.70	+0.2
2,664,261	-		IAI47_12670	0.70	+0.9
2,664,359	+		IAI47_12670	0.87	-0.9
2,664,366	+		IAI47_12670	0.88	-0.1
2,664,367	-		IAI47_12670	0.88	-1.7
2,664,367	-		IAI47_12670	0.88	-0.4
2,664,381	+				-1.4
2,664,381	+				-1.7
2,664,381	+				+0.7
2,664,382	-				-2.8
2,664,394	+				+0.6
2,664,395	-				-0.8
2,664,395	-				-1.4
2,664,395	-				+1.0
2,664,415	+				-0.2
2,664,415	+				-0.0
2,664,415	+				-0.6
2,664,416	-				-0.2
2,664,416	-				-0.4
2,664,416	-				-0.6
2,664,480	+				+1.5
2,664,480	+				-0.9
2,664,481	-				-1.0
2,664,481	-				-0.6
2,664,497	+				+2.2
2,664,497	+				-0.2
2,664,497	+				+0.1
2,664,497	+				+1.1
2,664,498	-				-0.8
2,664,498	-				-0.8
2,664,498	-				-0.4
2,664,498	-				+1.7
2,664,498	-				+1.5
2,664,498	-				+0.7
2,664,498	-				-0.4
2,664,538	-				+1.5
2,664,538	-				-1.5
2,664,538	-				+0.1
2,664,558	-				+1.8
2,664,565	-				+1.6
2,664,577	+				+1.0
2,664,578	-				-2.2
2,664,578	-				-0.6
2,664,743	+		IAI47_12675	0.19	-1.3
2,664,743	+		IAI47_12675	0.19	-1.1
2,664,743	+		IAI47_12675	0.19	+1.5
2,664,744	-		IAI47_12675	0.19	-0.4
2,664,744	-		IAI47_12675	0.19	+0.0
2,664,744	-		IAI47_12675	0.19	-0.2
2,664,884	+		IAI47_12675	0.28	-0.0
2,664,884	+		IAI47_12675	0.28	-2.3
2,664,885	-		IAI47_12675	0.28	-0.1
2,664,886	+		IAI47_12675	0.28	+3.1
2,664,886	+		IAI47_12675	0.28	+0.7
2,664,886	+		IAI47_12675	0.28	-0.6
2,664,886	+		IAI47_12675	0.28	-2.6
2,664,886	+		IAI47_12675	0.28	+0.6
2,664,886	+		IAI47_12675	0.28	-2.3
2,664,887	-		IAI47_12675	0.28	-0.2
2,664,887	-		IAI47_12675	0.28	-1.9
2,664,887	-		IAI47_12675	0.28	+1.8
2,664,887	-		IAI47_12675	0.28	+0.3
2,664,905	-		IAI47_12675	0.29	+1.0
2,664,905	-		IAI47_12675	0.29	+0.0
2,664,905	-		IAI47_12675	0.29	-0.1
2,664,905	-		IAI47_12675	0.29	+1.2
2,664,905	-		IAI47_12675	0.29	+0.7
2,664,905	-		IAI47_12675	0.29	-2.9
2,664,905	-		IAI47_12675	0.29	-0.9
2,664,922	+		IAI47_12675	0.30	-1.5
2,664,922	+		IAI47_12675	0.30	-0.5
2,664,922	+		IAI47_12675	0.30	-0.3
2,664,922	+		IAI47_12675	0.30	-0.4
2,664,922	+		IAI47_12675	0.30	-2.1
2,664,922	+		IAI47_12675	0.30	+1.4
2,664,923	-		IAI47_12675	0.30	-1.2
2,664,923	-		IAI47_12675	0.30	+0.0
2,664,923	-		IAI47_12675	0.30	+0.9
2,664,923	-		IAI47_12675	0.30	+0.2
2,664,923	-		IAI47_12675	0.30	-1.4
2,664,923	-		IAI47_12675	0.30	+0.9
2,664,980	+		IAI47_12675	0.34	-1.7
2,664,981	-		IAI47_12675	0.34	-1.3
2,664,981	-		IAI47_12675	0.34	-1.1
2,665,065	+		IAI47_12675	0.39	+0.2
2,665,072	+		IAI47_12675	0.39	+1.0
2,665,079	+		IAI47_12675	0.40	+0.3
2,665,079	+				+0.0
2,665,079	+		IAI47_12675	0.40	+1.4
2,665,079	+		IAI47_12675	0.40	-0.8
2,665,080	-		IAI47_12675	0.40	+0.6
2,665,143	-		IAI47_12675	0.43	-0.8
2,665,143	-		IAI47_12675	0.43	-2.1
2,665,207	+		IAI47_12675	0.47	+1.2
2,665,207	+		IAI47_12675	0.47	-1.5
2,665,208	-		IAI47_12675	0.47	-0.7
2,665,208	-		IAI47_12675	0.47	+0.9
2,665,208	-		IAI47_12675	0.47	-2.7
2,665,214	+		IAI47_12675	0.48	+0.9
2,665,214	+		IAI47_12675	0.48	-1.3
2,665,214	+		IAI47_12675	0.48	-1.0
2,665,214	+		IAI47_12675	0.48	-1.3
2,665,214	+		IAI47_12675	0.48	-1.7
2,665,215	-		IAI47_12675	0.48	-1.2
2,665,215	-		IAI47_12675	0.48	-1.8
2,665,215	-		IAI47_12675	0.48	+0.8
2,665,215	-		IAI47_12675	0.48	+1.5
2,665,215	-		IAI47_12675	0.48	-2.0
2,665,215	-		IAI47_12675	0.48	+2.0
2,665,223	+		IAI47_12675	0.48	+1.1
2,665,223	+		IAI47_12675	0.48	-0.7
2,665,224	-		IAI47_12675	0.48	-0.4
2,665,224	-		IAI47_12675	0.48	-1.7
2,665,225	+		IAI47_12675	0.48	-3.1
2,665,225	+		IAI47_12675	0.48	+0.5
2,665,225	+		IAI47_12675	0.48	-1.1
2,665,225	+		IAI47_12675	0.48	+1.5
2,665,226	-		IAI47_12675	0.48	+1.6
2,665,226	-		IAI47_12675	0.48	-2.4
2,665,226	-		IAI47_12675	0.48	-0.1
2,665,226	-		IAI47_12675	0.48	+1.5
2,665,226	-		IAI47_12675	0.48	+1.2
2,665,226	-		IAI47_12675	0.48	+1.0
2,665,241	+		IAI47_12675	0.49	-0.2
2,665,242	-		IAI47_12675	0.49	+1.6
2,665,268	+		IAI47_12675	0.51	-0.1
2,665,268	-		IAI47_12675	0.51	-0.5
2,665,389	-		IAI47_12675	0.58	-0.2
2,665,389	-		IAI47_12675	0.58	+2.1
2,665,389	-		IAI47_12675	0.58	-0.4
2,665,389	-		IAI47_12675	0.58	-1.2
2,665,389	-		IAI47_12675	0.58	-2.3
2,665,391	-		IAI47_12675	0.59	-2.0