Strain Fitness in Pantoea sp. MT58 around IAI47_12650

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,659,463	+		IAI47_12645	0.25	-1.8
2,659,557	+		IAI47_12645	0.33	-1.8
2,659,557	+		IAI47_12645	0.33	-2.3
2,659,557	+		IAI47_12645	0.33	-2.4
2,659,674	+		IAI47_12645	0.44	-2.8
2,659,674	+		IAI47_12645	0.44	-2.9
2,659,674	+		IAI47_12645	0.44	-2.4
2,659,710	+		IAI47_12645	0.48	-2.1
2,659,780	+		IAI47_12645	0.54	-2.6
2,659,913	+		IAI47_12645	0.67	-2.2
2,659,979	+		IAI47_12645	0.73	-1.6
2,660,034	+		IAI47_12645	0.78	-1.6
2,660,034	+		IAI47_12645	0.78	-0.8
2,660,034	+		IAI47_12645	0.78	-2.0
2,660,074	+		IAI47_12645	0.82	+3.8
2,660,105	+		IAI47_12645	0.85	-2.5
2,660,105	+		IAI47_12645	0.85	-1.6
2,660,231	+				-2.2
2,660,251	+				-1.5
2,660,251	+				-2.8
2,660,251	+				-1.2
2,660,268	+				-2.7
2,660,268	+				+1.6
2,660,268	+				-0.6
2,660,268	+				-2.2
2,660,268	+				-1.7
2,660,274	+				+0.7
2,660,274	+				-2.7
2,660,274	+				-2.0
2,660,275	-				-1.6
2,660,275	-				+0.5
2,660,283	+				+0.2
2,660,283	+				+1.9
2,660,320	+				-0.1
2,660,321	-				-0.8
2,660,321	-				+0.6
2,660,321	-				+1.1
2,660,321	-				-0.6
2,660,324	-				+0.4
2,660,365	-				-0.2
2,660,369	+				-1.5
2,660,392	-				+0.2
2,660,441	+		IAI47_12650	0.16	-0.2
2,660,441	+		IAI47_12650	0.16	-3.0
2,660,441	+		IAI47_12650	0.16	+0.8
2,660,441	+		IAI47_12650	0.16	+0.4
2,660,442	-		IAI47_12650	0.16	+0.7
2,660,452	-		IAI47_12650	0.18	-0.6
2,660,467	+		IAI47_12650	0.21	-1.3
2,660,468	-		IAI47_12650	0.21	+0.8
2,660,468	-		IAI47_12650	0.21	-0.8
2,660,468	-		IAI47_12650	0.21	-1.7
2,660,543	+		IAI47_12650	0.37	+0.0
2,660,543	+		IAI47_12650	0.37	-0.4
2,660,544	-		IAI47_12650	0.38	-1.3
2,660,544	-		IAI47_12650	0.38	+1.1
2,660,616	+		IAI47_12650	0.53	-2.1
2,660,617	-		IAI47_12650	0.53	+0.5
2,660,637	-		IAI47_12650	0.57	+0.5
2,660,652	+		IAI47_12650	0.61	-0.8
2,660,653	-		IAI47_12650	0.61	-2.0
2,660,734	+		IAI47_12650	0.78	-1.2
2,660,735	-		IAI47_12650	0.78	-0.8
2,660,735	-		IAI47_12650	0.78	-0.1
2,660,786	+		IAI47_12650	0.89	+0.5
2,660,786	+		IAI47_12650	0.89	-0.5
2,660,787	-		IAI47_12650	0.90	+0.4
2,660,828	+				-1.4
2,660,828	+				+0.4
2,660,828	+				+0.6
2,660,829	-				-2.9
2,660,829	-				+0.1
2,660,829	-				+1.1
2,660,857	+				-0.5
2,660,858	-				+1.0
2,660,858	-				+1.4
2,660,865	+				-2.2
2,660,865	+				-1.3
2,660,865	+				+0.6
2,660,871	+				-1.1
2,660,872	-				-1.6
2,660,948	+				+0.6
2,660,966	+				-0.2
2,660,966	+				-0.7
2,660,966	+				-2.0
2,660,967	-				+0.7
2,660,967	-				+0.5
2,660,969	-				-1.6
2,660,983	+				+0.8
2,660,984	-				-2.7
2,660,986	+				+2.3
2,660,987	-				+1.1
2,660,987	-				-1.0
2,661,002	+				-0.2
2,661,023	+				-1.7
2,661,023	+				-1.5
2,661,023	+				-2.9
2,661,023	+				+0.0
2,661,024	-				+3.1
2,661,037	+				+1.5
2,661,038	-				-1.2
2,661,057	+				+0.8
2,661,112	+		IAI47_12655	0.12	+0.4
2,661,112	+		IAI47_12655	0.12	-1.1
2,661,112	+		IAI47_12655	0.12	+0.0
2,661,145	+		IAI47_12655	0.14	-2.2
2,661,145	+		IAI47_12655	0.14	+0.0
2,661,146	-		IAI47_12655	0.14	+1.8
2,661,146	-		IAI47_12655	0.14	+0.2
2,661,172	+		IAI47_12655	0.15	+0.4
2,661,173	-		IAI47_12655	0.15	-0.6
2,661,239	+		IAI47_12655	0.19	-1.4
2,661,240	-		IAI47_12655	0.19	+0.6
2,661,252	-		IAI47_12655	0.19	-0.2
2,661,252	-		IAI47_12655	0.19	-2.8
2,661,261	+		IAI47_12655	0.20	+0.6
2,661,261	+		IAI47_12655	0.20	-0.7
2,661,261	+		IAI47_12655	0.20	-1.5
2,661,261	+		IAI47_12655	0.20	-1.2
2,661,261	+		IAI47_12655	0.20	-1.9
2,661,261	+		IAI47_12655	0.20	+0.0
2,661,262	-		IAI47_12655	0.20	+0.4
2,661,262	-		IAI47_12655	0.20	-0.1
2,661,262	-		IAI47_12655	0.20	-1.4
2,661,262	-		IAI47_12655	0.20	-1.9
2,661,273	+		IAI47_12655	0.21	+0.7
2,661,273	+		IAI47_12655	0.21	+1.0
2,661,273	+		IAI47_12655	0.21	-0.4
2,661,273	+		IAI47_12655	0.21	+0.7
2,661,278	+		IAI47_12655	0.21	-0.8
2,661,278	+		IAI47_12655	0.21	+1.0
2,661,278	+		IAI47_12655	0.21	-0.8
2,661,278	+		IAI47_12655	0.21	-1.2
2,661,278	+		IAI47_12655	0.21	+0.8
2,661,279	-		IAI47_12655	0.21	+1.8
2,661,290	+		IAI47_12655	0.21	-0.3
2,661,290	+		IAI47_12655	0.21	-1.2
2,661,291	-		IAI47_12655	0.21	-2.1
2,661,291	-		IAI47_12655	0.21	-0.6
2,661,347	+		IAI47_12655	0.24	-1.4
2,661,347	+		IAI47_12655	0.24	+0.6
2,661,402	+		IAI47_12655	0.27	+0.0
2,661,402	+		IAI47_12655	0.27	-2.5
2,661,403	-		IAI47_12655	0.27	-0.8
2,661,403	-		IAI47_12655	0.27	+2.2
2,661,403	-		IAI47_12655	0.27	+0.5
2,661,404	+		IAI47_12655	0.28	-0.6
2,661,405	-		IAI47_12655	0.28	+1.7
2,661,405	-		IAI47_12655	0.28	+0.5
2,661,405	-		IAI47_12655	0.28	-0.9
2,661,436	+		IAI47_12655	0.29	+1.1
2,661,436	+		IAI47_12655	0.29	+1.7
2,661,436	+		IAI47_12655	0.29	-2.3
2,661,437	-		IAI47_12655	0.29	-2.3
2,661,437	-		IAI47_12655	0.29	-1.1
2,661,521	+		IAI47_12655	0.34	-1.0
2,661,521	+		IAI47_12655	0.34	+2.4
2,661,534	+		IAI47_12655	0.34	+2.9
2,661,534	+		IAI47_12655	0.34	+1.6
2,661,534	+		IAI47_12655	0.34	+0.1
2,661,534	+		IAI47_12655	0.34	-1.6
2,661,535	-		IAI47_12655	0.35	-1.3
2,661,535	-		IAI47_12655	0.35	-0.2
2,661,535	-		IAI47_12655	0.35	+0.8
2,661,535	-		IAI47_12655	0.35	+0.4
2,661,582	-		IAI47_12655	0.37	-0.8
2,661,582	-		IAI47_12655	0.37	-1.5
2,661,684	+		IAI47_12655	0.42	-0.6
2,661,684	+		IAI47_12655	0.42	+3.2
2,661,684	+		IAI47_12655	0.42	-2.2
2,661,684	+		IAI47_12655	0.42	-0.6
2,661,684	+		IAI47_12655	0.42	+0.5
2,661,684	+		IAI47_12655	0.42	+1.4
2,661,684	+		IAI47_12655	0.42	-1.6
2,661,684	+		IAI47_12655	0.42	-1.1
2,661,684	+		IAI47_12655	0.42	+3.4
2,661,684	+		IAI47_12655	0.42	-2.8
2,661,684	+		IAI47_12655	0.42	-1.3
2,661,684	+		IAI47_12655	0.42	-2.4
2,661,684	+		IAI47_12655	0.42	-0.8
2,661,684	+		IAI47_12655	0.42	-1.7
2,661,684	+		IAI47_12655	0.42	-2.0
2,661,685	-		IAI47_12655	0.43	-1.0
2,661,685	-		IAI47_12655	0.43	-2.2
2,661,685	-		IAI47_12655	0.43	-3.1
2,661,685	-		IAI47_12655	0.43	-1.0
2,661,685	-		IAI47_12655	0.43	-0.4
2,661,685	-		IAI47_12655	0.43	-2.5
2,661,685	-		IAI47_12655	0.43	-1.8
2,661,686	+		IAI47_12655	0.43	-0.1
2,661,704	+		IAI47_12655	0.44	-0.4
2,661,704	+		IAI47_12655	0.44	-0.4
2,661,704	+		IAI47_12655	0.44	-1.1
2,661,705	-		IAI47_12655	0.44	+0.4
2,661,816	-		IAI47_12655	0.50	-0.8
2,661,816	-		IAI47_12655	0.50	+0.3
2,661,831	+		IAI47_12655	0.50	+0.9
2,661,833	+		IAI47_12655	0.50	-1.3
2,661,833	+		IAI47_12655	0.50	-1.6