Strain Fitness in Pantoea sp. MT58 around IAI47_08310

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,757,420	+		IAI47_08300	0.84	+1.1
1,757,420	+		IAI47_08300	0.84	-0.8
1,757,440	+		IAI47_08300	0.85	+0.1
1,757,440	+		IAI47_08300	0.85	-0.4
1,757,440	+		IAI47_08300	0.85	-0.5
1,757,441	-		IAI47_08300	0.85	+1.4
1,757,441	-		IAI47_08300	0.85	-1.2
1,757,441	-		IAI47_08300	0.85	-1.3
1,757,441	-		IAI47_08300	0.85	-1.5
1,757,487	+		IAI47_08300	0.88	-0.1
1,757,487	+		IAI47_08300	0.88	+0.4
1,757,543	-				+0.2
1,757,543	-				-1.6
1,757,604	+				-0.6
1,757,604	+				-1.1
1,757,604	+				-1.0
1,757,605	-				-0.9
1,757,608	+				+1.0
1,757,661	-				-0.2
1,757,661	-				-1.1
1,757,698	-				+1.1
1,757,698	-				-1.6
1,757,739	-				+0.4
1,757,750	-				-2.5
1,757,753	+				+0.0
1,757,753	+				+0.7
1,757,753	+				-1.8
1,757,753	+				+0.3
1,757,754	-				-0.9
1,757,754	-				-1.3
1,757,754	-				+0.7
1,757,841	+		IAI47_08305	0.17	-1.5
1,757,841	+		IAI47_08305	0.17	-0.9
1,757,841	+		IAI47_08305	0.17	-1.3
1,757,851	-		IAI47_08305	0.19	-1.5
1,757,890	+		IAI47_08305	0.27	+0.3
1,757,890	+		IAI47_08305	0.27	+0.4
1,757,890	+		IAI47_08305	0.27	-0.3
1,757,891	-		IAI47_08305	0.27	-0.9
1,757,897	+		IAI47_08305	0.28	-0.1
1,757,897	+		IAI47_08305	0.28	-0.1
1,757,897	+		IAI47_08305	0.28	+0.2
1,757,897	+		IAI47_08305	0.28	-0.0
1,757,897	+		IAI47_08305	0.28	-0.8
1,757,898	-		IAI47_08305	0.28	+1.4
1,757,898	-		IAI47_08305	0.28	+0.4
1,757,898	-		IAI47_08305	0.28	+0.8
1,757,898	-		IAI47_08305	0.28	-1.3
1,757,898	-		IAI47_08305	0.28	-0.4
1,757,898	-		IAI47_08305	0.28	-1.4
1,757,898	-		IAI47_08305	0.28	-1.0
1,757,898	-		IAI47_08305	0.28	+0.7
1,757,934	-		IAI47_08305	0.36	-0.1
1,758,000	+		IAI47_08305	0.49	+0.4
1,758,000	+		IAI47_08305	0.49	-0.2
1,758,000	+		IAI47_08305	0.49	-0.2
1,758,001	-		IAI47_08305	0.49	-1.2
1,758,001	-		IAI47_08305	0.49	-0.9
1,758,053	+		IAI47_08305	0.59	+0.5
1,758,053	+		IAI47_08305	0.59	+0.5
1,758,054	-		IAI47_08305	0.60	-0.2
1,758,054	-		IAI47_08305	0.60	+1.3
1,758,144	+		IAI47_08305	0.78	+2.0
1,758,144	+		IAI47_08305	0.78	-0.7
1,758,236	+				-0.2
1,758,236	+				-0.1
1,758,236	+				+1.2
1,758,253	-				-0.4
1,758,329	-				-1.3
1,758,391	+				-0.9
1,758,391	+				+1.5
1,758,392	-				+0.4
1,758,411	-				+0.1
1,758,411	-				-2.1
1,758,455	+				+1.7
1,758,455	+				+1.7
1,758,455	+				+2.6
1,758,455	+				+1.3
1,758,455	+				+0.0
1,758,455	+				-1.3
1,758,455	+				-0.2
1,758,455	+				+0.3
1,758,456	-				+1.1
1,758,458	+				-2.1
1,758,458	+				+0.3
1,758,458	+				+3.3
1,758,459	-				+0.0
1,758,459	-				-2.5
1,758,459	-				-1.2
1,758,459	-				-0.3
1,758,503	-				+3.6
1,758,512	+				-0.7
1,758,512	+				+0.1
1,758,512	+				+1.6
1,758,513	-				+0.5
1,758,513	-				+2.7
1,758,513	-				+0.1
1,758,522	+				+1.3
1,758,562	-				-2.0
1,758,562	-				-0.7
1,758,562	-				+0.7
1,758,572	+				+0.9
1,758,572	+				+0.3
1,758,583	+		IAI47_08310	0.10	+0.3
1,758,583	+		IAI47_08310	0.10	-1.3
1,758,583	+		IAI47_08310	0.10	+2.2
1,758,583	+		IAI47_08310	0.10	+0.3
1,758,583	+		IAI47_08310	0.10	+0.5
1,758,583	+		IAI47_08310	0.10	-3.0
1,758,583	+		IAI47_08310	0.10	+1.1
1,758,583	+		IAI47_08310	0.10	-0.7
1,758,583	+		IAI47_08310	0.10	-1.2
1,758,583	+		IAI47_08310	0.10	+1.4
1,758,583	+		IAI47_08310	0.10	+0.1
1,758,583	+		IAI47_08310	0.10	+3.3
1,758,583	+		IAI47_08310	0.10	-1.5
1,758,583	+		IAI47_08310	0.10	-1.5
1,758,583	+		IAI47_08310	0.10	-0.7
1,758,583	+		IAI47_08310	0.10	+3.0
1,758,584	-		IAI47_08310	0.10	+0.9
1,758,584	-		IAI47_08310	0.10	-1.6
1,758,584	-		IAI47_08310	0.10	+1.7
1,758,584	-		IAI47_08310	0.10	+0.3
1,758,584	-		IAI47_08310	0.10	-1.8
1,758,584	-		IAI47_08310	0.10	+0.4
1,758,584	-		IAI47_08310	0.10	+1.0
1,758,584	-		IAI47_08310	0.10	-1.2
1,758,584	-		IAI47_08310	0.10	+1.5
1,758,584	-		IAI47_08310	0.10	-0.6
1,758,584	-		IAI47_08310	0.10	+0.7
1,758,584	-		IAI47_08310	0.10	-0.5
1,758,584	-		IAI47_08310	0.10	+0.4
1,758,584	-		IAI47_08310	0.10	+1.5
1,758,585	+		IAI47_08310	0.10	+0.8
1,758,585	+		IAI47_08310	0.10	-1.2
1,758,585	+		IAI47_08310	0.10	-2.2
1,758,585	+		IAI47_08310	0.10	-0.6
1,758,585	+		IAI47_08310	0.10	-0.3
1,758,585	+		IAI47_08310	0.10	-2.6
1,758,585	+		IAI47_08310	0.10	-1.5
1,758,586	-		IAI47_08310	0.10	+2.1
1,758,586	-		IAI47_08310	0.10	+0.3
1,758,586	-		IAI47_08310	0.10	+1.6
1,758,594	+		IAI47_08310	0.11	+0.8
1,758,608	+		IAI47_08310	0.12	+0.1
1,758,609	-		IAI47_08310	0.12	-0.3
1,758,609	-		IAI47_08310	0.12	+3.1
1,758,609	-		IAI47_08310	0.12	+0.4
1,758,609	-		IAI47_08310	0.12	-0.1
1,758,611	+		IAI47_08310	0.12	-2.5
1,758,612	-		IAI47_08310	0.12	+1.0
1,758,612	-		IAI47_08310	0.12	+0.2
1,758,612	-		IAI47_08310	0.12	-0.1
1,758,645	+		IAI47_08310	0.14	-1.1
1,758,646	-		IAI47_08310	0.14	+0.1
1,758,646	-		IAI47_08310	0.14	-0.2
1,758,684	+		IAI47_08310	0.16	+1.9
1,758,724	+		IAI47_08310	0.18	+1.1
1,758,724	+		IAI47_08310	0.18	+0.9
1,758,725	-		IAI47_08310	0.19	-2.0
1,758,725	-		IAI47_08310	0.19	+1.9
1,758,726	+		IAI47_08310	0.19	+1.4
1,758,726	+		IAI47_08310	0.19	-1.4
1,758,726	+		IAI47_08310	0.19	+1.5
1,758,727	-		IAI47_08310	0.19	+1.1
1,758,727	-		IAI47_08310	0.19	+0.1
1,758,727	-		IAI47_08310	0.19	+1.3
1,758,727	-		IAI47_08310	0.19	-0.3
1,758,727	-		IAI47_08310	0.19	+1.7
1,758,750	+		IAI47_08310	0.20	-0.6
1,758,750	+		IAI47_08310	0.20	+0.7
1,758,774	+		IAI47_08310	0.21	-2.2
1,758,775	-		IAI47_08310	0.22	+1.5
1,758,806	-		IAI47_08310	0.23	-0.2
1,758,852	+		IAI47_08310	0.26	-0.1
1,758,852	+		IAI47_08310	0.26	+1.3
1,758,853	-		IAI47_08310	0.26	+1.0
1,758,853	-		IAI47_08310	0.26	+0.2
1,758,853	-		IAI47_08310	0.26	+1.5
1,758,910	+		IAI47_08310	0.30	-1.1
1,758,910	+		IAI47_08310	0.30	-1.0
1,758,911	-		IAI47_08310	0.30	+0.6
1,758,911	-		IAI47_08310	0.30	+1.3
1,758,911	-		IAI47_08310	0.30	-0.7
1,758,945	+		IAI47_08310	0.32	+0.9
1,758,945	+		IAI47_08310	0.32	+0.9
1,758,946	-		IAI47_08310	0.32	+0.9
1,758,976	+		IAI47_08310	0.34	+2.1
1,758,976	+		IAI47_08310	0.34	+1.3
1,758,976	+		IAI47_08310	0.34	+0.9
1,758,976	+		IAI47_08310	0.34	+0.1
1,758,977	-		IAI47_08310	0.34	+1.3
1,758,977	-		IAI47_08310	0.34	-0.1
1,758,977	-		IAI47_08310	0.34	-2.7
1,758,978	+		IAI47_08310	0.34	+0.2
1,758,978	+		IAI47_08310	0.34	+1.7
1,758,978	+		IAI47_08310	0.34	+0.4
1,758,978	+		IAI47_08310	0.34	+0.5
1,758,979	-		IAI47_08310	0.34	-1.5
1,758,979	-		IAI47_08310	0.34	-1.2
1,758,979	-		IAI47_08310	0.34	-0.3
1,758,984	+		IAI47_08310	0.34	+0.7
1,758,984	+		IAI47_08310	0.34	+0.6
1,758,984	+		IAI47_08310	0.34	+1.9
1,758,984	+		IAI47_08310	0.34	+0.9
1,758,984	+		IAI47_08310	0.34	+1.4
1,758,984	+		IAI47_08310	0.34	+0.8
1,758,985	-		IAI47_08310	0.34	+1.7
1,758,985	-		IAI47_08310	0.34	-2.6
1,758,985	-		IAI47_08310	0.34	+0.6
1,758,985	-		IAI47_08310	0.34	+1.6
1,758,985	-		IAI47_08310	0.34	-1.4
1,758,985	-		IAI47_08310	0.34	+1.9
1,758,985	-		IAI47_08310	0.34	+0.8
1,758,985	-		IAI47_08310	0.34	+0.3
1,758,985	-		IAI47_08310	0.34	+1.7
1,758,985	-		IAI47_08310	0.34	-1.5
1,758,985	-		IAI47_08310	0.34	+0.1
1,758,985	-		IAI47_08310	0.34	+0.7
1,758,985	-		IAI47_08310	0.34	+0.8
1,758,985	-		IAI47_08310	0.34	+3.3
1,758,985	-		IAI47_08310	0.34	-0.7
1,759,002	+		IAI47_08310	0.35	+0.0
1,759,008	+		IAI47_08310	0.35	-0.6
1,759,009	-		IAI47_08310	0.35	-1.7
1,759,009	-		IAI47_08310	0.35	+0.6
1,759,009	-		IAI47_08310	0.35	-0.3
1,759,104	+		IAI47_08310	0.41	-0.1
1,759,105	-		IAI47_08310	0.41	-2.7
1,759,105	-		IAI47_08310	0.41	-0.1
1,759,105	-		IAI47_08310	0.41	-2.6
1,759,132	-		IAI47_08310	0.43	-0.9
1,759,132	-		IAI47_08310	0.43	+0.4
1,759,132	-		IAI47_08310	0.43	-1.5
1,759,185	+		IAI47_08310	0.46	+2.3
1,759,185	+		IAI47_08310	0.46	+1.1
1,759,186	-		IAI47_08310	0.46	-1.8
1,759,186	-		IAI47_08310	0.46	-3.4
1,759,220	+		IAI47_08310	0.48	+0.5
1,759,220	+		IAI47_08310	0.48	+1.3
1,759,220	+		IAI47_08310	0.48	-1.8
1,759,220	+		IAI47_08310	0.48	+2.3
1,759,220	+		IAI47_08310	0.48	+0.8
1,759,220	+		IAI47_08310	0.48	+0.2
1,759,220	+		IAI47_08310	0.48	+2.7
1,759,220	+		IAI47_08310	0.48	-1.6
1,759,220	+		IAI47_08310	0.48	-2.7
1,759,221	-		IAI47_08310	0.48	+0.4
1,759,221	-		IAI47_08310	0.48	+0.8
1,759,276	-		IAI47_08310	0.51	+0.7
1,759,358	+		IAI47_08310	0.56	+0.8
1,759,551	+		IAI47_08310	0.68	-1.0
1,759,552	-		IAI47_08310	0.68	-2.4
1,759,743	+		IAI47_08310	0.79	+0.5
1,759,962	+				-0.2
1,759,962	+				-0.1
1,759,963	-				-0.5
1,759,963	-				+1.0
1,760,142	+				-0.9
1,760,142	+				+1.7
1,760,176	+				+0.8
1,760,177	-				+0.6
1,760,220	-				-1.0
1,760,223	+				+0.1
1,760,223	+				+1.7
1,760,223	+				+0.0
1,760,224	-				+1.1
1,760,224	-				+0.6
1,760,244	-				+0.7
1,760,245	+				+2.0
1,760,245	+				+1.0
1,760,259	+				-0.9
1,760,260	-				+1.6
1,760,260	-				-2.0
1,760,314	-				-1.8
1,760,323	-				-1.7
1,760,349	+				+0.0
1,760,350	-				+1.4
1,760,350	-				+0.3
1,760,380	+				-2.3
1,760,380	+				-0.3
1,760,381	-				+0.3
1,760,384	-				+0.8
1,760,419	+				+0.4
1,760,420	-				-0.7
1,760,420	-				-1.0
1,760,420	-				+1.0
1,760,425	+				+0.8
1,760,426	-				-0.8
1,760,431	+				-1.5
1,760,431	+				-2.3
1,760,450	+		IAI47_08315	0.11	+2.0
1,760,450	+		IAI47_08315	0.11	-2.5
1,760,450	+		IAI47_08315	0.11	+0.2
1,760,451	-		IAI47_08315	0.11	-1.8
1,760,451	-		IAI47_08315	0.11	-1.5
1,760,451	-		IAI47_08315	0.11	+0.7
1,760,452	+		IAI47_08315	0.11	+1.1
1,760,452	+		IAI47_08315	0.11	+4.3
1,760,453	-		IAI47_08315	0.11	+2.1
1,760,453	-		IAI47_08315	0.11	-1.7
1,760,453	-		IAI47_08315	0.11	-3.4
1,760,461	-		IAI47_08315	0.11	+1.3
1,760,461	-		IAI47_08315	0.11	+1.6
1,760,473	+		IAI47_08315	0.12	-2.9
1,760,474	-		IAI47_08315	0.12	+0.3
1,760,551	+		IAI47_08315	0.17	+0.5
1,760,551	+		IAI47_08315	0.17	-0.1
1,760,552	-		IAI47_08315	0.17	+1.4
1,760,552	-		IAI47_08315	0.17	+0.5
1,760,552	-		IAI47_08315	0.17	+1.0
1,760,552	-		IAI47_08315	0.17	+1.6
1,760,552	-		IAI47_08315	0.17	+1.7
1,760,552	-		IAI47_08315	0.17	-0.1
1,760,574	+		IAI47_08315	0.19	+0.5
1,760,575	-		IAI47_08315	0.19	+1.5
1,760,603	+		IAI47_08315	0.21	-0.2
1,760,603	+		IAI47_08315	0.21	+0.6
1,760,604	-		IAI47_08315	0.21	-0.5
1,760,604	-		IAI47_08315	0.21	+1.0
1,760,606	+		IAI47_08315	0.21	-1.0
1,760,607	-		IAI47_08315	0.21	+0.7
1,760,607	-		IAI47_08315	0.21	-0.8
1,760,667	-		IAI47_08315	0.25	+0.6
1,760,667	-		IAI47_08315	0.25	-0.1
1,760,675	+		IAI47_08315	0.25	+0.5
1,760,676	-		IAI47_08315	0.25	+0.9
1,760,676	-		IAI47_08315	0.25	-2.2
1,760,700	+		IAI47_08315	0.27	+0.3
1,760,701	-		IAI47_08315	0.27	-1.2
1,760,780	+		IAI47_08315	0.32	+0.4
1,760,780	+		IAI47_08315	0.32	-0.6
1,760,780	+		IAI47_08315	0.32	-1.5
1,760,781	-		IAI47_08315	0.32	+1.8
1,760,781	-		IAI47_08315	0.32	-0.4
1,760,781	-		IAI47_08315	0.32	-1.4
1,760,785	+		IAI47_08315	0.32	-2.1
1,760,785	+		IAI47_08315	0.32	+3.1
1,760,785	+		IAI47_08315	0.32	-0.5
1,760,786	-		IAI47_08315	0.32	-2.5
1,760,786	-		IAI47_08315	0.32	+0.6
1,760,846	+		IAI47_08315	0.36	+0.7
1,760,846	+		IAI47_08315	0.36	+0.1
1,760,890	-		IAI47_08315	0.39	+3.8
1,760,902	+		IAI47_08315	0.40	+0.2
1,760,902	+		IAI47_08315	0.40	-2.1
1,760,903	-		IAI47_08315	0.40	+1.1
1,760,903	-		IAI47_08315	0.40	+0.5
1,760,903	-		IAI47_08315	0.40	-0.2
1,760,905	+		IAI47_08315	0.40	+0.2
1,760,905	+		IAI47_08315	0.40	+2.1
1,760,905	+		IAI47_08315	0.40	+1.3
1,760,905	+		IAI47_08315	0.40	+0.3
1,760,905	+		IAI47_08315	0.40	-0.9
1,760,906	-		IAI47_08315	0.40	-2.3
1,760,906	-		IAI47_08315	0.40	-1.1
1,761,001	+		IAI47_08315	0.46	-2.4
1,761,001	+		IAI47_08315	0.46	-1.9
1,761,001	+		IAI47_08315	0.46	-0.1
1,761,001	+		IAI47_08315	0.46	+2.8
1,761,002	-		IAI47_08315	0.46	+1.7
1,761,002	-		IAI47_08315	0.46	-0.2
1,761,002	-		IAI47_08315	0.46	-1.1
1,761,002	-		IAI47_08315	0.46	+0.5
1,761,085	+		IAI47_08315	0.51	+0.6
1,761,086	-		IAI47_08315	0.51	+1.2