Strain Fitness in Pantoea sp. MT58 around IAI47_08125

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,712,276	+		IAI47_08115	0.51	+2.3
1,712,276	+		IAI47_08115	0.51	-1.3
1,712,276	+		IAI47_08115	0.51	+1.2
1,712,276	+		IAI47_08115	0.51	+0.6
1,712,276	+		IAI47_08115	0.51	-1.4
1,712,276	+		IAI47_08115	0.51	-1.2
1,712,277	-		IAI47_08115	0.52	+0.1
1,712,277	-		IAI47_08115	0.52	-2.3
1,712,277	-		IAI47_08115	0.52	+1.5
1,712,277	-		IAI47_08115	0.52	+0.5
1,712,277	-		IAI47_08115	0.52	-1.9
1,712,277	-		IAI47_08115	0.52	-0.9
1,712,277	-		IAI47_08115	0.52	+0.3
1,712,277	-		IAI47_08115	0.52	+3.3
1,712,280	+		IAI47_08115	0.52	-0.7
1,712,280	+		IAI47_08115	0.52	-1.4
1,712,280	+		IAI47_08115	0.52	-2.1
1,712,280	+		IAI47_08115	0.52	+1.4
1,712,280	+		IAI47_08115	0.52	-2.7
1,712,280	+		IAI47_08115	0.52	-1.7
1,712,280	+		IAI47_08115	0.52	-0.5
1,712,280	+		IAI47_08115	0.52	+1.4
1,712,281	-		IAI47_08115	0.53	+2.5
1,712,281	-		IAI47_08115	0.53	+1.4
1,712,281	-		IAI47_08115	0.53	+0.4
1,712,281	-		IAI47_08115	0.53	-1.4
1,712,281	-		IAI47_08115	0.53	-1.0
1,712,281	-		IAI47_08115	0.53	-0.1
1,712,347	+		IAI47_08115	0.73	+0.7
1,712,348	-		IAI47_08115	0.73	-0.7
1,712,411	+				-1.6
1,712,411	+				-1.6
1,712,411	+				-0.2
1,712,411	+				+0.1
1,712,411	+				+0.1
1,712,411	+				+0.4
1,712,411	+				+0.5
1,712,412	-				-0.7
1,712,412	-				-0.1
1,712,412	-				-0.7
1,712,414	+				-0.7
1,712,414	+				+0.4
1,712,414	+				-0.9
1,712,414	+				+1.4
1,712,414	+				-0.1
1,712,414	+				-0.9
1,712,414	+				-0.3
1,712,415	-				+0.8
1,712,415	-				+1.9
1,712,415	-				+0.7
1,712,415	-				-1.0
1,712,415	-				-0.1
1,712,415	-				-2.2
1,712,415	-				-0.9
1,712,434	-				+0.3
1,712,434	-				+0.1
1,712,439	+				-1.3
1,712,439	+				+0.3
1,712,439	+				+0.3
1,712,440	-				+0.4
1,712,440	-				-2.0
1,712,471	+				+1.5
1,712,471	+				+0.4
1,712,508	+				+0.8
1,712,509	-				+2.5
1,712,610	+				+0.3
1,712,610	+				+1.7
1,712,610	+				+2.7
1,712,610	+				-0.8
1,712,611	-				+2.9
1,712,622	-				+0.7
1,712,649	+				+1.1
1,712,675	+				+1.1
1,712,675	+				+0.1
1,713,136	+				-3.0
1,713,145	+				+1.9
1,713,158	+				-1.0
1,713,158	+				+1.4
1,713,172	+				-1.4
1,713,173	-				-1.6
1,713,193	+				-0.5
1,713,193	+				+0.4
1,713,193	+				+0.6
1,713,193	+				+2.7
1,713,193	+				+1.2
1,713,194	-				+0.8
1,713,194	-				+3.4
1,713,194	-				-2.7
1,713,261	+				-2.7
1,713,262	-				-0.5
1,713,262	-				+0.1
1,713,262	-				+0.9
1,713,266	+				-1.3
1,713,267	-				+2.6
1,713,267	-				-2.2
1,713,267	-				-1.1
1,713,267	-				+0.7
1,713,267	-				-0.7
1,713,267	-				+0.4
1,713,267	-				+2.5
1,713,365	+				+2.3
1,713,495	+		IAI47_08125	0.16	+0.6
1,713,495	+		IAI47_08125	0.16	+1.4
1,713,496	-		IAI47_08125	0.16	-1.6
1,713,496	-		IAI47_08125	0.16	+0.6
1,713,520	+		IAI47_08125	0.17	-1.6
1,713,520	+		IAI47_08125	0.17	+0.5
1,713,521	-		IAI47_08125	0.17	+1.5
1,713,533	+		IAI47_08125	0.18	-0.3
1,713,533	+		IAI47_08125	0.18	-1.7
1,713,534	-		IAI47_08125	0.18	-0.3
1,713,586	+		IAI47_08125	0.22	+0.3
1,713,587	-		IAI47_08125	0.22	-0.2
1,713,623	+		IAI47_08125	0.24	-0.5
1,713,624	-		IAI47_08125	0.24	+1.0
1,713,624	-		IAI47_08125	0.24	-0.3
1,713,692	+		IAI47_08125	0.29	-2.4
1,713,692	+		IAI47_08125	0.29	+0.6
1,713,693	-		IAI47_08125	0.29	+1.9
1,713,705	+		IAI47_08125	0.30	-2.5
1,713,705	+		IAI47_08125	0.30	-0.6
1,713,706	-		IAI47_08125	0.30	-0.6
1,713,807	+		IAI47_08125	0.37	-1.4
1,713,830	+		IAI47_08125	0.38	-0.7
1,713,830	+		IAI47_08125	0.38	+0.2
1,713,830	+		IAI47_08125	0.38	+1.5
1,713,830	+		IAI47_08125	0.38	-0.5
1,713,831	-		IAI47_08125	0.38	-1.7
1,713,867	+		IAI47_08125	0.41	-2.1
1,713,867	+		IAI47_08125	0.41	-2.3
1,713,868	-		IAI47_08125	0.41	+1.4
1,713,868	-		IAI47_08125	0.41	+1.0
1,713,868	-		IAI47_08125	0.41	+0.9
1,713,868	-		IAI47_08125	0.41	-1.0
1,713,917	+		IAI47_08125	0.44	-0.9
1,713,917	+		IAI47_08125	0.44	-1.1
1,713,917	+		IAI47_08125	0.44	-0.6
1,713,917	+		IAI47_08125	0.44	-1.0
1,713,917	+		IAI47_08125	0.44	-0.7
1,713,917	+		IAI47_08125	0.44	-0.8
1,713,917	+		IAI47_08125	0.44	-1.1
1,713,917	+		IAI47_08125	0.44	-0.3
1,713,917	+		IAI47_08125	0.44	+0.6
1,713,917	+		IAI47_08125	0.44	+0.7
1,713,917	+		IAI47_08125	0.44	-1.3
1,713,917	+		IAI47_08125	0.44	-1.6
1,713,918	-		IAI47_08125	0.44	+1.4
1,713,918	-		IAI47_08125	0.44	-2.9
1,713,918	-		IAI47_08125	0.44	-2.2
1,713,918	-		IAI47_08125	0.44	+1.3
1,713,918	-		IAI47_08125	0.44	-0.5
1,713,918	-		IAI47_08125	0.44	-1.9
1,713,918	-		IAI47_08125	0.44	-0.1
1,713,918	-		IAI47_08125	0.44	-0.3
1,713,918	-		IAI47_08125	0.44	+0.3
1,713,918	-		IAI47_08125	0.44	+0.6
1,713,918	-		IAI47_08125	0.44	-0.1
1,713,918	-		IAI47_08125	0.44	-1.1
1,713,950	+		IAI47_08125	0.46	-1.3
1,713,951	-		IAI47_08125	0.46	+0.1
1,713,951	-		IAI47_08125	0.46	+2.5
1,713,951	-		IAI47_08125	0.46	+1.9
1,713,963	+		IAI47_08125	0.47	-1.5
1,713,993	+		IAI47_08125	0.49	-0.6
1,713,993	+		IAI47_08125	0.49	+0.2
1,713,994	-		IAI47_08125	0.49	+0.9
1,713,994	-		IAI47_08125	0.49	-2.2
1,713,994	-		IAI47_08125	0.49	-1.1
1,714,013	+		IAI47_08125	0.50	+0.3
1,714,014	-		IAI47_08125	0.51	-1.5
1,714,014	-		IAI47_08125	0.51	+0.5
1,714,014	-		IAI47_08125	0.51	-0.3
1,714,029	+		IAI47_08125	0.52	-0.6
1,714,029	+		IAI47_08125	0.52	-0.7
1,714,030	-		IAI47_08125	0.52	-1.5
1,714,204	-		IAI47_08125	0.63	+2.0
1,714,204	-		IAI47_08125	0.63	-0.4
1,714,205	+		IAI47_08125	0.63	+0.9
1,714,205	+		IAI47_08125	0.63	+0.9
1,714,205	+		IAI47_08125	0.63	+3.9
1,714,205	+		IAI47_08125	0.63	+1.8
1,714,205	+		IAI47_08125	0.63	-0.0
1,714,205	+		IAI47_08125	0.63	-0.2
1,714,205	+		IAI47_08125	0.63	-0.5
1,714,205	+		IAI47_08125	0.63	+0.1
1,714,206	-		IAI47_08125	0.63	-0.1
1,714,206	-		IAI47_08125	0.63	+0.4
1,714,206	-		IAI47_08125	0.63	+1.2
1,714,206	-		IAI47_08125	0.63	-1.4
1,714,206	-		IAI47_08125	0.63	+0.9
1,714,221	+		IAI47_08125	0.65	-0.4
1,714,258	+		IAI47_08125	0.67	-1.3
1,714,258	+		IAI47_08125	0.67	-0.8
1,714,258	+		IAI47_08125	0.67	-1.9
1,714,258	+		IAI47_08125	0.67	-2.2
1,714,258	+		IAI47_08125	0.67	+0.3
1,714,266	+		IAI47_08125	0.68	-0.7
1,714,293	+		IAI47_08125	0.69	+1.3
1,714,293	+		IAI47_08125	0.69	-0.9
1,714,293	+		IAI47_08125	0.69	-0.0
1,714,294	-		IAI47_08125	0.69	+1.4
1,714,294	-		IAI47_08125	0.69	+3.4
1,714,299	-		IAI47_08125	0.70	-0.3
1,714,396	-		IAI47_08125	0.76	-1.3
1,714,456	+		IAI47_08125	0.80	-2.0
1,714,457	-		IAI47_08125	0.80	+0.2
1,714,498	+		IAI47_08125	0.83	-1.2
1,714,499	-		IAI47_08125	0.83	-1.7
1,714,499	-		IAI47_08125	0.83	-1.1
1,714,517	+		IAI47_08125	0.84	-0.9
1,714,517	+		IAI47_08125	0.84	-0.5
1,714,571	+		IAI47_08125	0.88	+1.5
1,714,613	+				-0.5
1,714,613	+				-1.5
1,714,614	-				+0.8
1,714,624	+				+0.6
1,714,635	+				+3.1
1,714,635	+				+3.3
1,714,635	+				-0.3
1,714,636	-				+0.7
1,714,636	-				-0.9
1,714,636	-				+0.9
1,714,709	+				-1.0
1,714,710	-				-0.8
1,714,710	-				-0.9
1,714,710	-				+1.4
1,714,726	+				-1.1
1,714,727	-				-0.4
1,714,729	+				-1.1
1,714,729	+				+0.4
1,714,729	+				+0.0
1,714,729	+				+1.3
1,714,730	-				-0.5
1,714,730	-				+1.8
1,714,748	+				+2.9
1,714,748	+				-0.3
1,714,748	+				-0.0
1,714,748	+				-0.5
1,714,748	+				+2.1
1,714,749	-				-0.7
1,714,749	-				+2.0
1,714,749	-				-1.5
1,714,749	-				+2.2
1,714,749	-				-0.4
1,714,749	-				-0.7
1,714,779	+				-1.3
1,714,780	-				-1.3
1,714,786	+				+0.7
1,714,878	+				+1.3
1,714,879	-				+0.7
1,714,879	-				+0.3
1,714,879	-				+1.3
1,714,879	-				+0.4
1,714,892	+		IAI47_08130	0.12	+1.7
1,714,892	+		IAI47_08130	0.12	+2.3
1,714,892	+		IAI47_08130	0.12	+0.6
1,714,893	-		IAI47_08130	0.12	-0.7
1,714,893	-		IAI47_08130	0.12	-1.0
1,714,897	+		IAI47_08130	0.13	+0.5
1,715,022	+		IAI47_08130	0.48	+0.4
1,715,022	+		IAI47_08130	0.48	+0.2
1,715,023	-		IAI47_08130	0.48	+0.9
1,715,073	+		IAI47_08130	0.61	-1.5
1,715,073	+		IAI47_08130	0.61	+0.8
1,715,074	-		IAI47_08130	0.62	-0.1
1,715,095	+		IAI47_08130	0.67	-0.1
1,715,095	+		IAI47_08130	0.67	-0.3
1,715,095	+		IAI47_08130	0.67	-0.9
1,715,095	+		IAI47_08130	0.67	+0.4
1,715,095	+		IAI47_08130	0.67	-1.5
1,715,095	+		IAI47_08130	0.67	-1.3
1,715,096	-		IAI47_08130	0.68	-0.4
1,715,096	-		IAI47_08130	0.68	-0.2
1,715,096	-		IAI47_08130	0.68	+0.1
1,715,096	-		IAI47_08130	0.68	+0.6
1,715,096	-		IAI47_08130	0.68	-0.5
1,715,096	-		IAI47_08130	0.68	-0.7
1,715,096	-		IAI47_08130	0.68	-1.6
1,715,096	-		IAI47_08130	0.68	+0.7
1,715,096	-		IAI47_08130	0.68	+0.0
1,715,172	+		IAI47_08130	0.89	-1.0
1,715,173	-		IAI47_08130	0.89	-0.4
1,715,173	-		IAI47_08130	0.89	-0.0
1,715,173	-		IAI47_08130	0.89	+3.5
1,715,173	-		IAI47_08130	0.89	-0.1
1,715,182	+				-1.3
1,715,215	-				-1.6
1,715,236	+				+1.5
1,715,237	-				+0.6
1,715,237	-				-1.3
1,715,269	+		IAI47_08135	0.14	+1.5
1,715,314	+		IAI47_08135	0.25	-1.3
1,715,314	+		IAI47_08135	0.25	-0.0
1,715,314	+		IAI47_08135	0.25	+0.5
1,715,314	+		IAI47_08135	0.25	+1.5
1,715,314	+		IAI47_08135	0.25	-0.5
1,715,314	+		IAI47_08135	0.25	+2.0
1,715,314	+		IAI47_08135	0.25	+2.8
1,715,314	+		IAI47_08135	0.25	+0.9
1,715,314	+		IAI47_08135	0.25	-1.2
1,715,315	-		IAI47_08135	0.25	+0.9
1,715,315	-		IAI47_08135	0.25	+0.5
1,715,315	-		IAI47_08135	0.25	+0.4
1,715,315	-		IAI47_08135	0.25	-2.1
1,715,315	-		IAI47_08135	0.25	-1.4
1,715,315	-		IAI47_08135	0.25	+3.7
1,715,315	-		IAI47_08135	0.25	+0.1
1,715,315	-		IAI47_08135	0.25	+1.2
1,715,315	-		IAI47_08135	0.25	+0.4
1,715,347	+		IAI47_08135	0.33	-0.3
1,715,347	+		IAI47_08135	0.33	+0.5
1,715,347	+		IAI47_08135	0.33	-1.7
1,715,347	+		IAI47_08135	0.33	+0.5
1,715,347	+		IAI47_08135	0.33	+1.3
1,715,347	+		IAI47_08135	0.33	+0.9
1,715,348	-		IAI47_08135	0.33	+0.7
1,715,348	-		IAI47_08135	0.33	+1.3
1,715,348	-		IAI47_08135	0.33	-2.1
1,715,348	-		IAI47_08135	0.33	+0.4
1,715,348	-		IAI47_08135	0.33	+0.5
1,715,348	-		IAI47_08135	0.33	+1.3
1,715,349	+		IAI47_08135	0.33	+0.1
1,715,349	+		IAI47_08135	0.33	-0.7
1,715,349	+		IAI47_08135	0.33	+2.3
1,715,349	+		IAI47_08135	0.33	+1.6
1,715,349	+		IAI47_08135	0.33	+1.2
1,715,349	+		IAI47_08135	0.33	+1.6
1,715,349	+		IAI47_08135	0.33	+1.2
1,715,349	+		IAI47_08135	0.33	-0.3
1,715,349	+		IAI47_08135	0.33	+0.7
1,715,349	+		IAI47_08135	0.33	+0.2
1,715,349	+		IAI47_08135	0.33	-0.2
1,715,349	-		IAI47_08135	0.33	+0.9
1,715,350	-		IAI47_08135	0.34	+1.3
1,715,350	-		IAI47_08135	0.34	+2.6
1,715,350	-		IAI47_08135	0.34	-1.5
1,715,350	-		IAI47_08135	0.34	+0.1
1,715,350	-		IAI47_08135	0.34	+0.2
1,715,350	-		IAI47_08135	0.34	-2.2
1,715,350	-		IAI47_08135	0.34	-1.8
1,715,350	-		IAI47_08135	0.34	+0.3
1,715,350	-		IAI47_08135	0.34	-1.6
1,715,350	-		IAI47_08135	0.34	-0.7
1,715,355	+		IAI47_08135	0.35	-1.4
1,715,431	+		IAI47_08135	0.53	+1.3
1,715,431	+		IAI47_08135	0.53	+0.0
1,715,431	+		IAI47_08135	0.53	+0.5
1,715,431	+		IAI47_08135	0.53	+0.9
1,715,432	-		IAI47_08135	0.54	+0.6
1,715,432	-		IAI47_08135	0.54	+0.2
1,715,432	-		IAI47_08135	0.54	+1.5
1,715,432	-		IAI47_08135	0.54	+0.4
1,715,470	+		IAI47_08135	0.63	+0.2
1,715,470	+		IAI47_08135	0.63	-0.1
1,715,470	+		IAI47_08135	0.63	+2.6
1,715,471	-		IAI47_08135	0.63	+1.1
1,715,471	-		IAI47_08135	0.63	-1.3
1,715,504	+		IAI47_08135	0.71	+1.1
1,715,504	+		IAI47_08135	0.71	-0.2
1,715,504	+		IAI47_08135	0.71	+1.7
1,715,504	+		IAI47_08135	0.71	+0.7
1,715,592	+				+0.2
1,715,593	-				+2.3
1,715,593	-				+2.4
1,715,616	+				+1.8
1,715,616	+				+0.3
1,715,616	+				-0.8
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1,715,616	+				-0.5
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1,715,616	+				+1.7
1,715,617	-				-0.3
1,715,617	-				+0.0
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1,715,617	-				+0.6
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1,715,675	+				-0.3
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1,715,675	+				+0.5
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1,715,676	-				+1.1
1,715,676	-				+1.3
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1,715,679	+				+0.3
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1,715,680	-				-0.5
1,715,680	-				-1.5
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1,715,680	-				-0.0
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1,715,680	-				-3.1
1,715,680	-				-0.0
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1,715,691	+				+0.7
1,715,692	-				+2.0
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1,715,734	-				-0.5
1,715,735	+				+0.3
1,715,736	-				+1.2
1,715,743	+				+0.3
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1,715,746	-				-1.4
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1,715,746	-				-1.2
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