Strain Fitness in Pantoea sp. MT58 around IAI47_06845

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,428,783	+		IAI47_06840	0.28	-0.1
1,428,783	+		IAI47_06840	0.28	+0.8
1,428,783	+		IAI47_06840	0.28	-0.8
1,428,784	-		IAI47_06840	0.28	+0.5
1,428,834	+		IAI47_06840	0.34	-1.1
1,428,834	+		IAI47_06840	0.34	-1.0
1,428,834	+		IAI47_06840	0.34	+3.0
1,428,834	+		IAI47_06840	0.34	-1.0
1,428,834	+		IAI47_06840	0.34	-2.4
1,428,834	+		IAI47_06840	0.34	-1.8
1,428,835	-		IAI47_06840	0.34	-0.5
1,428,835	-		IAI47_06840	0.34	+0.3
1,428,840	+		IAI47_06840	0.34	+1.5
1,428,840	+		IAI47_06840	0.34	+2.7
1,428,841	-		IAI47_06840	0.34	+0.6
1,428,841	-		IAI47_06840	0.34	-0.3
1,428,841	-		IAI47_06840	0.34	-0.6
1,428,841	-		IAI47_06840	0.34	+0.5
1,428,898	-		IAI47_06840	0.41	+2.4
1,428,912	+		IAI47_06840	0.42	+1.5
1,428,941	+		IAI47_06840	0.45	-0.0
1,428,942	-		IAI47_06840	0.46	-0.3
1,429,023	+		IAI47_06840	0.55	-1.2
1,429,023	+		IAI47_06840	0.55	+0.4
1,429,024	-		IAI47_06840	0.55	-0.0
1,429,031	+		IAI47_06840	0.55	+1.3
1,429,031	+		IAI47_06840	0.55	+0.6
1,429,032	-		IAI47_06840	0.56	+0.8
1,429,093	+		IAI47_06840	0.62	+1.3
1,429,094	-		IAI47_06840	0.62	+0.6
1,429,094	-		IAI47_06840	0.62	+2.7
1,429,246	+		IAI47_06840	0.79	+0.5
1,429,246	+		IAI47_06840	0.79	-2.1
1,429,246	+		IAI47_06840	0.79	+1.5
1,429,286	+		IAI47_06840	0.84	-0.6
1,429,286	+		IAI47_06840	0.84	+0.9
1,429,287	-		IAI47_06840	0.84	-0.8
1,429,287	-		IAI47_06840	0.84	-1.1
1,429,287	-		IAI47_06840	0.84	+0.9
1,429,287	-		IAI47_06840	0.84	-1.3
1,429,287	-		IAI47_06840	0.84	-0.4
1,429,287	-		IAI47_06840	0.84	+0.4
1,429,356	+				-1.9
1,429,356	+				-2.2
1,429,357	-				-0.5
1,429,409	-				-2.4
1,429,422	+				+0.5
1,429,422	+				+0.1
1,429,423	-				-1.0
1,429,426	-				+1.7
1,429,451	+				+0.4
1,429,451	+				-1.5
1,429,451	+				+0.2
1,429,451	+				-2.4
1,429,451	+				+0.5
1,429,451	+				-2.2
1,429,452	-				+0.6
1,429,458	+				-2.5
1,429,458	+				-2.4
1,429,458	+				+1.1
1,429,458	+				-0.0
1,429,458	+				+0.7
1,429,458	+				-0.4
1,429,459	-				-1.5
1,429,459	-				+1.3
1,429,459	-				+1.4
1,429,459	-				-1.6
1,429,459	-				+3.2
1,429,472	+				-2.3
1,429,472	+				-0.5
1,429,472	+				+0.4
1,429,473	-				-2.2
1,429,473	-				-0.8
1,429,474	+				-0.3
1,429,474	+				-0.7
1,429,474	+				-0.9
1,429,474	+				+0.7
1,429,475	-				+0.0
1,429,479	+				+0.2
1,429,479	+				-1.1
1,429,479	+				-1.4
1,429,479	+				+0.5
1,429,479	+				-1.1
1,429,479	+				-0.9
1,429,479	+				-1.2
1,429,479	+				+0.9
1,429,479	+				+0.1
1,429,480	-				+0.7
1,429,480	-				+0.5
1,429,480	-				-2.0
1,429,480	-				+0.4
1,429,480	-				+0.5
1,429,480	-				+0.9
1,429,480	-				+3.2
1,429,480	-				-0.3
1,429,480	-				+0.5
1,429,480	-				+2.9
1,429,480	-				-1.7
1,429,480	-				+0.1
1,429,480	-				-0.6
1,429,480	-				+0.4
1,429,480	-				+2.3
1,429,492	+				-3.3
1,429,547	+				-2.1
1,429,567	-				-2.9
1,429,567	-				-1.8
1,429,567	-				-2.3
1,429,585	+				+0.7
1,429,586	-				-0.1
1,429,592	+				-1.7
1,429,592	+				-1.4
1,429,592	+				-0.7
1,429,593	-				+0.7
1,429,593	-				-0.6
1,429,593	-				+0.5
1,429,593	-				-1.5
1,429,608	+				-0.3
1,429,608	+				-1.9
1,429,608	+				-0.7
1,429,608	+				-1.5
1,429,609	-				+1.0
1,429,609	-				-0.9
1,429,610	+				-2.5
1,429,610	+				+0.4
1,429,610	+				-2.7
1,429,610	+				-0.2
1,429,610	+				-0.7
1,429,610	+				+0.3
1,429,611	-				-0.4
1,429,611	-				-3.4
1,429,611	-				+1.2
1,429,611	-				-2.1
1,429,672	+				+0.8
1,429,673	-				+0.8
1,429,680	+				+0.2
1,429,680	+				+1.3
1,429,680	+				+0.9
1,429,680	+				-1.1
1,429,681	-				-1.0
1,429,681	-				-1.2
1,429,681	-				-3.3
1,429,681	-				-1.6
1,429,712	-				+2.7
1,429,887	+		IAI47_06845	0.17	+0.8
1,429,888	-		IAI47_06845	0.17	-1.2
1,429,888	-		IAI47_06845	0.17	-0.4
1,429,888	-		IAI47_06845	0.17	-0.6
1,429,939	-		IAI47_06845	0.21	-0.2
1,429,988	+		IAI47_06845	0.24	+0.8
1,429,997	+		IAI47_06845	0.25	+1.6
1,430,034	+		IAI47_06845	0.27	-0.8
1,430,034	+		IAI47_06845	0.27	-0.0
1,430,123	+		IAI47_06845	0.34	-0.5
1,430,124	-		IAI47_06845	0.34	+0.4
1,430,147	+		IAI47_06845	0.36	-0.9
1,430,147	+		IAI47_06845	0.36	-0.2
1,430,147	+		IAI47_06845	0.36	+1.5
1,430,147	+		IAI47_06845	0.36	-1.3
1,430,148	-		IAI47_06845	0.36	+0.1
1,430,150	+		IAI47_06845	0.36	+1.1
1,430,150	+		IAI47_06845	0.36	+1.3
1,430,150	+		IAI47_06845	0.36	+0.4
1,430,150	+		IAI47_06845	0.36	+3.0
1,430,150	+		IAI47_06845	0.36	-0.9
1,430,151	-		IAI47_06845	0.36	-0.1
1,430,151	-		IAI47_06845	0.36	+0.1
1,430,151	-		IAI47_06845	0.36	-0.2
1,430,151	-		IAI47_06845	0.36	+0.7
1,430,151	-		IAI47_06845	0.36	-0.9
1,430,153	+		IAI47_06845	0.36	+0.1
1,430,153	+		IAI47_06845	0.36	-0.9
1,430,153	+		IAI47_06845	0.36	+0.2
1,430,153	+		IAI47_06845	0.36	+0.7
1,430,154	-		IAI47_06845	0.36	+1.8
1,430,154	-		IAI47_06845	0.36	+1.8
1,430,154	-		IAI47_06845	0.36	-2.1
1,430,154	-		IAI47_06845	0.36	+1.8
1,430,250	+		IAI47_06845	0.43	+1.5
1,430,251	-		IAI47_06845	0.43	+0.9
1,430,251	-		IAI47_06845	0.43	-0.1
1,430,251	-		IAI47_06845	0.43	+0.7
1,430,252	+		IAI47_06845	0.43	+0.8
1,430,252	+		IAI47_06845	0.43	+0.1
1,430,252	+		IAI47_06845	0.43	+1.8
1,430,252	+		IAI47_06845	0.43	-0.6
1,430,252	+		IAI47_06845	0.43	-1.0
1,430,252	+		IAI47_06845	0.43	+0.6
1,430,252	+		IAI47_06845	0.43	+0.0
1,430,252	+		IAI47_06845	0.43	+0.7
1,430,252	+		IAI47_06845	0.43	-1.6
1,430,252	+		IAI47_06845	0.43	+0.5
1,430,252	+		IAI47_06845	0.43	+0.8
1,430,252	+		IAI47_06845	0.43	+0.6
1,430,252	+		IAI47_06845	0.43	+1.0
1,430,252	+		IAI47_06845	0.43	-2.1
1,430,253	-		IAI47_06845	0.43	-1.4
1,430,253	-		IAI47_06845	0.43	+0.6
1,430,253	-		IAI47_06845	0.43	+2.8
1,430,253	-		IAI47_06845	0.43	+2.2
1,430,253	-		IAI47_06845	0.43	-1.3
1,430,253	-		IAI47_06845	0.43	-0.9
1,430,253	-		IAI47_06845	0.43	+1.5
1,430,253	-		IAI47_06845	0.43	+1.1
1,430,253	-		IAI47_06845	0.43	+3.1
1,430,253	-		IAI47_06845	0.43	+1.5
1,430,253	-		IAI47_06845	0.43	-1.4
1,430,253	-		IAI47_06845	0.43	+1.9
1,430,253	-		IAI47_06845	0.43	+0.2
1,430,253	-		IAI47_06845	0.43	+0.2
1,430,331	+		IAI47_06845	0.49	-0.7
1,430,332	-		IAI47_06845	0.49	-0.7
1,430,397	+		IAI47_06845	0.54	-1.7
1,430,397	+		IAI47_06845	0.54	+1.1
1,430,398	-		IAI47_06845	0.54	-1.6
1,430,433	+		IAI47_06845	0.56	-2.1
1,430,433	+		IAI47_06845	0.56	+0.3
1,430,433	+		IAI47_06845	0.56	-2.7
1,430,434	-		IAI47_06845	0.56	-1.6
1,430,434	-		IAI47_06845	0.56	-0.6
1,430,434	-		IAI47_06845	0.56	+2.6
1,430,434	-		IAI47_06845	0.56	+0.5
1,430,434	-		IAI47_06845	0.56	+0.4
1,430,436	-		IAI47_06845	0.57	+1.6
1,430,490	+		IAI47_06845	0.60	+1.0
1,430,490	+		IAI47_06845	0.60	-0.4
1,430,490	+		IAI47_06845	0.60	+0.4
1,430,490	+		IAI47_06845	0.60	+2.5
1,430,491	-		IAI47_06845	0.61	-0.0
1,430,491	-		IAI47_06845	0.61	+1.7
1,430,491	-		IAI47_06845	0.61	+1.5
1,430,491	-		IAI47_06845	0.61	-0.5
1,430,491	-		IAI47_06845	0.61	+0.3
1,430,491	-		IAI47_06845	0.61	-0.4
1,430,491	-		IAI47_06845	0.61	+1.2
1,430,492	+		IAI47_06845	0.61	-3.4
1,430,492	+		IAI47_06845	0.61	+0.6
1,430,493	-		IAI47_06845	0.61	+1.7
1,430,493	-		IAI47_06845	0.61	+0.6
1,430,493	-		IAI47_06845	0.61	+0.8
1,430,493	-		IAI47_06845	0.61	-0.9
1,430,520	-		IAI47_06845	0.63	+1.3
1,430,520	-		IAI47_06845	0.63	-0.2
1,430,526	+		IAI47_06845	0.63	+0.3
1,430,526	+		IAI47_06845	0.63	+0.3
1,430,527	-		IAI47_06845	0.63	+0.6
1,430,594	+		IAI47_06845	0.68	-1.6
1,430,606	-		IAI47_06845	0.69	+1.0
1,430,606	-		IAI47_06845	0.69	+1.1
1,430,657	-		IAI47_06845	0.73	+0.9
1,430,736	+		IAI47_06845	0.78	+1.0
1,430,736	+		IAI47_06845	0.78	-1.4
1,430,736	+		IAI47_06845	0.78	+0.7
1,430,737	-		IAI47_06845	0.78	+1.3
1,430,737	-		IAI47_06845	0.78	+1.3
1,430,737	-		IAI47_06845	0.78	-2.0
1,430,737	-		IAI47_06845	0.78	+1.0
1,430,737	-		IAI47_06845	0.78	+1.0
1,430,802	+		IAI47_06845	0.83	-0.1
1,430,813	-		IAI47_06845	0.84	+0.3
1,430,813	-		IAI47_06845	0.84	-0.1
1,430,813	-		IAI47_06845	0.84	+1.1
1,430,850	-		IAI47_06845	0.86	-2.3
1,430,851	+		IAI47_06845	0.87	-2.5
1,430,934	+				-0.9
1,430,934	+				+1.3
1,430,935	-				+1.2
1,430,935	-				+0.1
1,430,936	+				-2.2
1,430,954	+				-2.4
1,430,955	-				+0.4
1,430,972	+				+0.3
1,430,984	+				+1.1
1,430,998	+				-1.4
1,431,059	+				-1.3
1,431,059	+				-0.0
1,431,059	+				+1.2
1,431,059	+				-1.7
1,431,059	+				+1.0
1,431,059	+				-0.8
1,431,059	+				+0.4
1,431,059	+				+0.3
1,431,059	+				+1.1
1,431,059	+				+0.4
1,431,060	-				-0.9
1,431,060	-				+0.2
1,431,060	-				+0.8
1,431,060	-				-1.3
1,431,060	-				+2.1
1,431,060	-				+1.1
1,431,060	-				-0.9
1,431,060	-				-0.4
1,431,060	-				-0.8
1,431,091	+				+2.2
1,431,117	+				+0.3
1,431,117	+				+0.9
1,431,159	-				-1.9
1,431,216	+				+2.0
1,431,217	-				+0.2
1,431,217	-				+1.3
1,431,217	-				-0.9
1,431,267	+		IAI47_06850	0.16	+1.4
1,431,267	+		IAI47_06850	0.16	+1.6
1,431,267	+		IAI47_06850	0.16	-1.3
1,431,311	+		IAI47_06850	0.22	-0.4
1,431,311	+		IAI47_06850	0.22	-0.1
1,431,311	+		IAI47_06850	0.22	+0.7
1,431,311	+		IAI47_06850	0.22	+0.1
1,431,311	+		IAI47_06850	0.22	+1.5
1,431,311	+		IAI47_06850	0.22	-0.9
1,431,312	-		IAI47_06850	0.22	+0.2
1,431,312	-		IAI47_06850	0.22	+0.3
1,431,312	-		IAI47_06850	0.22	-2.1
1,431,312	-		IAI47_06850	0.22	-1.4
1,431,397	+		IAI47_06850	0.34	-0.8
1,431,398	-		IAI47_06850	0.34	+1.3
1,431,554	+		IAI47_06850	0.56	-1.1
1,431,554	+		IAI47_06850	0.56	-0.4
1,431,554	+		IAI47_06850	0.56	+1.8
1,431,554	+		IAI47_06850	0.56	-0.7
1,431,554	+		IAI47_06850	0.56	+1.5
1,431,554	+		IAI47_06850	0.56	+3.4
1,431,554	+		IAI47_06850	0.56	+1.4
1,431,554	+		IAI47_06850	0.56	-0.4
1,431,554	+		IAI47_06850	0.56	-0.8
1,431,555	-		IAI47_06850	0.56	-1.7
1,431,555	-		IAI47_06850	0.56	-1.0
1,431,555	-		IAI47_06850	0.56	+2.1
1,431,555	-		IAI47_06850	0.56	+0.3
1,431,555	-		IAI47_06850	0.56	+1.2
1,431,574	+		IAI47_06850	0.59	-0.4
1,431,575	-		IAI47_06850	0.59	+0.3
1,431,575	-		IAI47_06850	0.59	+2.5
1,431,604	-		IAI47_06850	0.63	+1.7
1,431,618	+		IAI47_06850	0.65	+1.2
1,431,622	-		IAI47_06850	0.66	-0.5
1,431,689	-		IAI47_06850	0.75	-1.9
1,431,728	+		IAI47_06850	0.81	+0.6
1,431,728	+		IAI47_06850	0.81	+1.5
1,431,728	+		IAI47_06850	0.81	-1.8
1,431,728	+		IAI47_06850	0.81	+0.5
1,431,729	-		IAI47_06850	0.81	-0.0
1,431,729	-		IAI47_06850	0.81	-1.8
1,431,766	-		IAI47_06850	0.86	+0.3
1,431,770	+		IAI47_06850	0.87	-0.7
1,431,771	-		IAI47_06850	0.87	-1.1
1,431,771	-		IAI47_06850	0.87	+2.2
1,431,771	-		IAI47_06850	0.87	-1.1
1,431,771	-		IAI47_06850	0.87	+0.3
1,431,788	+		IAI47_06850	0.89	+3.1
1,431,788	+		IAI47_06850	0.89	+0.6
1,431,789	-		IAI47_06850	0.89	+0.6
1,431,864	+				-0.6
1,431,864	+				+1.3
1,431,864	+				+0.7
1,431,865	-				-0.6
1,431,865	-				-0.5
1,431,865	-				+1.4
1,431,865	-				+0.5
1,431,865	-				-0.9
1,431,865	-				-0.7
1,431,872	+				+2.4
1,431,872	+				+1.2
1,431,873	-				-1.1
1,431,887	+				-0.6
1,431,887	+				-0.1
1,431,887	+				+0.1
1,431,887	+				+0.1
1,431,887	+				-0.1
1,431,887	+				+0.0
1,431,888	-				+0.8
1,431,888	-				+1.9
1,431,888	-				-0.8
1,431,898	+				-1.5
1,431,920	-				+0.2