Strain Fitness in Pantoea sp. MT58 around IAI47_06130

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,245,850	+		IAI47_06125	0.31	+0.8
1,245,971	+		IAI47_06125	0.41	+0.4
1,246,015	+		IAI47_06125	0.44	+2.6
1,246,165	+		IAI47_06125	0.55	+0.3
1,246,165	+		IAI47_06125	0.55	-2.7
1,246,165	+		IAI47_06125	0.55	+1.2
1,246,165	+		IAI47_06125	0.55	+0.7
1,246,166	-		IAI47_06125	0.55	+0.1
1,246,174	+		IAI47_06125	0.56	-0.6
1,246,174	+		IAI47_06125	0.56	+1.4
1,246,175	-		IAI47_06125	0.56	-0.2
1,246,175	-		IAI47_06125	0.56	+1.5
1,246,197	-		IAI47_06125	0.58	-0.4
1,246,234	+		IAI47_06125	0.61	+0.0
1,246,234	+		IAI47_06125	0.61	+4.3
1,246,234	+		IAI47_06125	0.61	+1.8
1,246,235	-		IAI47_06125	0.61	+3.1
1,246,235	-		IAI47_06125	0.61	-0.3
1,246,240	+		IAI47_06125	0.61	-0.6
1,246,240	+		IAI47_06125	0.61	+1.2
1,246,240	+		IAI47_06125	0.61	+1.4
1,246,240	+		IAI47_06125	0.61	+1.6
1,246,241	-		IAI47_06125	0.61	+2.2
1,246,255	+		IAI47_06125	0.62	-1.3
1,246,256	-		IAI47_06125	0.62	-1.8
1,246,256	-		IAI47_06125	0.62	-1.1
1,246,337	+		IAI47_06125	0.68	+0.2
1,246,337	+		IAI47_06125	0.68	-0.5
1,246,349	+		IAI47_06125	0.69	-1.6
1,246,382	-		IAI47_06125	0.72	+0.6
1,246,463	-		IAI47_06125	0.78	-1.3
1,246,463	-		IAI47_06125	0.78	+0.2
1,246,463	-		IAI47_06125	0.78	+1.1
1,246,537	-		IAI47_06125	0.84	+2.1
1,246,537	-		IAI47_06125	0.84	-0.8
1,246,537	-		IAI47_06125	0.84	-1.9
1,246,582	+		IAI47_06125	0.87	-1.3
1,246,607	+		IAI47_06125	0.89	-1.0
1,246,607	+		IAI47_06125	0.89	-0.1
1,246,607	+		IAI47_06125	0.89	+1.0
1,246,608	-		IAI47_06125	0.89	+1.0
1,246,608	-		IAI47_06125	0.89	-0.8
1,246,608	-		IAI47_06125	0.89	-1.6
1,246,665	+				+2.4
1,246,666	-				+0.6
1,246,748	+				+0.6
1,246,845	+				+0.2
1,246,873	-				+0.8
1,246,873	-				-1.8
1,246,935	+				-0.0
1,247,124	+		IAI47_06130	0.18	+0.5
1,247,124	+		IAI47_06130	0.18	+0.2
1,247,124	+		IAI47_06130	0.18	-1.9
1,247,124	+		IAI47_06130	0.18	+0.0
1,247,124	+		IAI47_06130	0.18	-0.4
1,247,124	+		IAI47_06130	0.18	-1.8
1,247,125	-		IAI47_06130	0.18	-1.4
1,247,125	-		IAI47_06130	0.18	+0.3
1,247,125	-		IAI47_06130	0.18	+1.6
1,247,125	-		IAI47_06130	0.18	-2.2
1,247,125	-		IAI47_06130	0.18	+1.8
1,247,142	+		IAI47_06130	0.19	+0.9
1,247,142	+		IAI47_06130	0.19	+2.4
1,247,143	-		IAI47_06130	0.19	-1.7
1,247,160	-		IAI47_06130	0.20	-1.1
1,247,168	+		IAI47_06130	0.20	+1.5
1,247,219	+		IAI47_06130	0.22	-0.7
1,247,219	+		IAI47_06130	0.22	-0.6
1,247,220	-		IAI47_06130	0.22	+0.4
1,247,220	-		IAI47_06130	0.22	+2.0
1,247,286	+		IAI47_06130	0.26	+0.3
1,247,286	+		IAI47_06130	0.26	-1.1
1,247,286	+		IAI47_06130	0.26	+0.4
1,247,286	+		IAI47_06130	0.26	+0.2
1,247,286	+		IAI47_06130	0.26	+1.0
1,247,286	+		IAI47_06130	0.26	+1.4
1,247,287	-		IAI47_06130	0.26	-1.8
1,247,287	-		IAI47_06130	0.26	+2.0
1,247,287	-		IAI47_06130	0.26	+0.8
1,247,287	-		IAI47_06130	0.26	-2.5
1,247,287	-		IAI47_06130	0.26	-1.1
1,247,461	-		IAI47_06130	0.34	-0.8
1,247,461	-		IAI47_06130	0.34	+0.8
1,247,496	+		IAI47_06130	0.36	+0.6
1,247,496	+		IAI47_06130	0.36	-1.4
1,247,682	+		IAI47_06130	0.44	-0.1
1,247,683	-		IAI47_06130	0.44	+0.2
1,247,780	+		IAI47_06130	0.49	-2.0
1,247,818	-		IAI47_06130	0.51	-1.6
1,247,875	-		IAI47_06130	0.54	+0.4
1,247,893	+		IAI47_06130	0.55	+0.4
1,247,893	+		IAI47_06130	0.55	+0.5
1,247,894	-		IAI47_06130	0.55	+1.7
1,247,894	-		IAI47_06130	0.55	+0.4
1,247,894	-		IAI47_06130	0.55	-2.5
1,247,934	-		IAI47_06130	0.56	-1.6
1,247,945	+		IAI47_06130	0.57	+0.2
1,247,946	-		IAI47_06130	0.57	-1.8
1,247,952	+		IAI47_06130	0.57	+0.3
1,247,952	+		IAI47_06130	0.57	-0.7
1,247,952	+		IAI47_06130	0.57	-0.3
1,247,953	-		IAI47_06130	0.57	-2.0
1,248,085	+		IAI47_06130	0.64	-1.4
1,248,085	+		IAI47_06130	0.64	+1.7
1,248,086	-		IAI47_06130	0.64	-0.6
1,248,086	-		IAI47_06130	0.64	+0.1
1,248,226	+		IAI47_06130	0.70	-0.1
1,248,226	+		IAI47_06130	0.70	+0.5
1,248,226	+		IAI47_06130	0.70	-1.2
1,248,227	-		IAI47_06130	0.70	-0.7
1,248,227	-		IAI47_06130	0.70	-0.8
1,248,227	-		IAI47_06130	0.70	-2.7
1,248,227	-		IAI47_06130	0.70	-1.6
1,248,227	-		IAI47_06130	0.70	+1.1
1,248,250	+		IAI47_06130	0.72	+0.7
1,248,250	+		IAI47_06130	0.72	+1.4
1,248,250	+		IAI47_06130	0.72	-0.6
1,248,250	+		IAI47_06130	0.72	-0.3
1,248,250	+		IAI47_06130	0.72	+1.0
1,248,250	+		IAI47_06130	0.72	-0.1
1,248,250	+		IAI47_06130	0.72	-1.5
1,248,250	+		IAI47_06130	0.72	-1.1
1,248,250	+		IAI47_06130	0.72	-0.5
1,248,250	+		IAI47_06130	0.72	-0.2
1,248,251	-		IAI47_06130	0.72	+2.4
1,248,251	-		IAI47_06130	0.72	+1.0
1,248,251	-		IAI47_06130	0.72	+0.5
1,248,251	-		IAI47_06130	0.72	+0.6
1,248,251	-		IAI47_06130	0.72	+0.4
1,248,251	-		IAI47_06130	0.72	+1.1
1,248,251	-		IAI47_06130	0.72	-0.2
1,248,251	-		IAI47_06130	0.72	+1.4
1,248,251	-		IAI47_06130	0.72	+1.4
1,248,252	+		IAI47_06130	0.72	-2.7
1,248,252	+		IAI47_06130	0.72	+1.6
1,248,252	+		IAI47_06130	0.72	-1.3
1,248,252	+		IAI47_06130	0.72	+0.2
1,248,252	+		IAI47_06130	0.72	-2.5
1,248,252	+		IAI47_06130	0.72	+1.3
1,248,252	+		IAI47_06130	0.72	+0.4
1,248,253	-		IAI47_06130	0.72	-1.8
1,248,253	-		IAI47_06130	0.72	+1.4
1,248,253	-		IAI47_06130	0.72	+2.3
1,248,253	-		IAI47_06130	0.72	+0.9
1,248,253	-		IAI47_06130	0.72	+0.2
1,248,254	+		IAI47_06130	0.72	-0.0
1,248,254	+		IAI47_06130	0.72	-0.3
1,248,254	+		IAI47_06130	0.72	+1.5
1,248,254	+		IAI47_06130	0.72	+0.9
1,248,254	+		IAI47_06130	0.72	+1.0
1,248,254	+		IAI47_06130	0.72	+0.4
1,248,254	+		IAI47_06130	0.72	-0.3
1,248,254	+		IAI47_06130	0.72	+0.5
1,248,254	+		IAI47_06130	0.72	-0.6
1,248,254	+		IAI47_06130	0.72	-0.8
1,248,254	+		IAI47_06130	0.72	-0.5
1,248,254	+		IAI47_06130	0.72	-0.6
1,248,255	-		IAI47_06130	0.72	-1.0
1,248,255	-		IAI47_06130	0.72	+0.5
1,248,255	-		IAI47_06130	0.72	-0.3
1,248,255	-		IAI47_06130	0.72	+0.1
1,248,255	-		IAI47_06130	0.72	-2.0
1,248,255	-		IAI47_06130	0.72	+2.9
1,248,255	-		IAI47_06130	0.72	-0.8
1,248,255	-		IAI47_06130	0.72	+0.7
1,248,255	-		IAI47_06130	0.72	+0.8
1,248,300	+		IAI47_06130	0.74	+2.1
1,248,300	+		IAI47_06130	0.74	-0.9
1,248,301	-		IAI47_06130	0.74	+3.4
1,248,301	-		IAI47_06130	0.74	+0.1
1,248,301	-		IAI47_06130	0.74	+0.5
1,248,381	+		IAI47_06130	0.78	-2.3
1,248,382	-		IAI47_06130	0.78	+1.5
1,248,409	+		IAI47_06130	0.79	+0.2
1,248,410	-		IAI47_06130	0.79	-0.0
1,248,410	-		IAI47_06130	0.79	+1.8
1,248,410	-		IAI47_06130	0.79	-0.9
1,248,410	-		IAI47_06130	0.79	+0.5
1,248,493	+		IAI47_06130	0.83	-2.2
1,248,493	+		IAI47_06130	0.83	-1.2
1,248,494	-		IAI47_06130	0.83	+1.7
1,248,494	-		IAI47_06130	0.83	-2.3
1,248,499	+		IAI47_06130	0.83	-1.2
1,248,499	+		IAI47_06130	0.83	+0.4
1,248,500	-		IAI47_06130	0.83	+0.7
1,248,544	+		IAI47_06130	0.86	-0.5
1,248,545	-		IAI47_06130	0.86	-2.1
1,248,545	-		IAI47_06130	0.86	+0.7
1,248,546	+		IAI47_06130	0.86	-1.4
1,248,546	+		IAI47_06130	0.86	+0.6
1,248,547	-		IAI47_06130	0.86	-1.2
1,248,547	-		IAI47_06130	0.86	-0.9
1,248,547	-		IAI47_06130	0.86	+2.2
1,248,547	-		IAI47_06130	0.86	-0.9
1,248,547	-		IAI47_06130	0.86	+1.2
1,248,733	+				-0.5
1,248,733	+				-1.5
1,248,733	+				+1.0
1,248,733	+				-1.7
1,248,733	+				+0.5
1,248,733	+				-2.0
1,248,733	+				+0.4
1,248,734	-				+1.5
1,248,734	-				-0.6
1,248,734	-				+0.6
1,248,734	-				-1.9
1,248,734	-				+0.3
1,248,734	-				+1.8
1,248,774	-				-0.0
1,248,774	-				-0.3
1,248,783	+				-2.3
1,248,807	+				+2.2
1,248,807	+				+3.5
1,248,807	+				+1.0
1,248,807	+				+0.8
1,248,808	-				-1.1
1,248,808	-				-1.6
1,248,900	+				+1.0
1,248,901	-				+0.6
1,248,901	-				-2.0
1,248,950	+				+0.6
1,248,950	+				-1.1
1,248,951	-				+0.8
1,248,951	-				+1.8
1,248,951	-				-1.7
1,248,973	+				+1.0
1,248,973	+				+0.6
1,248,973	+				-1.1
1,248,973	+				-0.8
1,248,973	+				+0.0
1,248,973	+				+1.7
1,248,974	-				-1.1
1,248,974	-				-1.1
1,248,974	-				+0.8
1,248,974	-				-0.4
1,248,974	-				-0.5
1,248,975	+				-0.5
1,248,975	+				-0.0
1,248,975	+				-1.2
1,248,975	+				+0.9
1,248,975	+				+2.0
1,248,975	+				+0.6
1,248,987	+				+1.3
1,248,992	+				-0.8
1,248,992	+				+1.4
1,248,992	+				-0.9
1,248,992	+				+6.2
1,249,144	+		IAI47_06135	0.15	-0.6
1,249,144	+		IAI47_06135	0.15	+1.4
1,249,144	+		IAI47_06135	0.15	+0.2
1,249,145	-		IAI47_06135	0.15	-1.9
1,249,145	-		IAI47_06135	0.15	+0.1
1,249,213	+		IAI47_06135	0.29	-2.6
1,249,213	+		IAI47_06135	0.29	+1.9
1,249,228	-		IAI47_06135	0.33	-2.9
1,249,333	+		IAI47_06135	0.54	-1.9
1,249,341	+		IAI47_06135	0.56	-2.4
1,249,341	+		IAI47_06135	0.56	-1.9
1,249,414	+		IAI47_06135	0.71	+0.3
1,249,414	+		IAI47_06135	0.71	-1.4
1,249,414	+		IAI47_06135	0.71	+0.8
1,249,505	+				+0.7
1,249,584	+				-0.8
1,249,584	+				+0.1
1,249,584	+				+2.7
1,249,584	+				-1.1
1,249,726	+		IAI47_06140	0.26	+1.5
1,249,726	+		IAI47_06140	0.26	+0.5
1,249,726	+		IAI47_06140	0.26	-0.0
1,249,727	-		IAI47_06140	0.26	-0.4
1,249,727	-		IAI47_06140	0.26	+2.8
1,249,811	-		IAI47_06140	0.42	-0.8
1,249,811	-		IAI47_06140	0.42	+0.9
1,249,811	-		IAI47_06140	0.42	+1.7
1,249,811	-		IAI47_06140	0.42	-0.4