Strain Fitness in Pantoea sp. MT58 around IAI47_00410

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
90,430	+				-1.2
90,430	+				-1.3
90,464	-				-0.5
90,512	+				-0.3
90,513	-				-0.2
90,513	-				+0.7
90,513	-				+1.0
90,525	+		IAI47_00405	0.11	+0.7
90,525	+		IAI47_00405	0.11	-1.2
90,526	-		IAI47_00405	0.11	-0.5
90,526	-		IAI47_00405	0.11	-1.2
90,526	-		IAI47_00405	0.11	+1.3
90,631	-		IAI47_00405	0.32	-0.5
90,641	+		IAI47_00405	0.34	+2.6
90,642	-		IAI47_00405	0.34	-0.4
90,645	+		IAI47_00405	0.34	-0.5
90,645	+		IAI47_00405	0.34	+1.0
90,659	+		IAI47_00405	0.37	+0.7
90,660	-		IAI47_00405	0.37	-1.3
90,660	-		IAI47_00405	0.37	+0.7
90,660	-		IAI47_00405	0.37	+1.4
90,676	-		IAI47_00405	0.40	-0.1
90,676	-		IAI47_00405	0.40	-1.8
90,676	-		IAI47_00405	0.40	-1.4
90,676	-		IAI47_00405	0.40	+0.2
90,676	-		IAI47_00405	0.40	-0.4
90,701	+		IAI47_00405	0.45	+0.7
90,701	+		IAI47_00405	0.45	-2.9
90,702	-		IAI47_00405	0.46	-1.4
90,715	+		IAI47_00405	0.48	+0.8
90,715	+		IAI47_00405	0.48	+1.6
90,715	+		IAI47_00405	0.48	-0.5
90,715	+		IAI47_00405	0.48	-0.3
90,715	+		IAI47_00405	0.48	-1.9
90,716	-		IAI47_00405	0.48	+2.3
90,716	-		IAI47_00405	0.48	-0.8
90,716	-		IAI47_00405	0.48	+1.0
90,716	-		IAI47_00405	0.48	+1.2
90,716	-		IAI47_00405	0.48	+1.0
90,716	-		IAI47_00405	0.48	+1.4
90,716	-		IAI47_00405	0.48	-0.3
90,716	-		IAI47_00405	0.48	-0.8
90,817	+		IAI47_00405	0.68	+2.2
90,817	+		IAI47_00405	0.68	-3.2
90,817	+		IAI47_00405	0.68	+0.7
90,817	+		IAI47_00405	0.68	-2.0
90,817	+		IAI47_00405	0.68	+4.0
90,817	+		IAI47_00405	0.68	-0.5
90,817	+		IAI47_00405	0.68	+0.5
90,817	+		IAI47_00405	0.68	+0.6
90,817	+		IAI47_00405	0.68	-0.8
90,817	+		IAI47_00405	0.68	-0.4
90,817	+		IAI47_00405	0.68	+1.6
90,817	+		IAI47_00405	0.68	+1.1
90,818	-		IAI47_00405	0.68	-1.3
90,818	-		IAI47_00405	0.68	+0.0
90,818	-		IAI47_00405	0.68	-0.7
90,818	-		IAI47_00405	0.68	-0.9
90,818	-		IAI47_00405	0.68	-0.6
90,818	-		IAI47_00405	0.68	+0.1
90,818	-		IAI47_00405	0.68	+0.1
90,818	-		IAI47_00405	0.68	-3.0
90,821	+		IAI47_00405	0.69	+1.4
90,821	+		IAI47_00405	0.69	-2.7
90,821	+		IAI47_00405	0.69	+0.3
90,821	+		IAI47_00405	0.69	-1.7
90,821	+		IAI47_00405	0.69	+0.3
90,821	+		IAI47_00405	0.69	+1.4
90,821	+		IAI47_00405	0.69	+2.8
90,821	+		IAI47_00405	0.69	+0.7
90,821	+		IAI47_00405	0.69	-2.7
90,822	-		IAI47_00405	0.69	-1.0
90,822	-		IAI47_00405	0.69	-0.2
90,822	-		IAI47_00405	0.69	-1.5
90,822	-		IAI47_00405	0.69	+2.2
90,822	-		IAI47_00405	0.69	-0.3
90,822	-		IAI47_00405	0.69	+1.5
90,822	-		IAI47_00405	0.69	+0.7
90,822	-		IAI47_00405	0.69	-0.5
90,822	-		IAI47_00405	0.69	+1.2
90,822	-		IAI47_00405	0.69	-0.8
90,822	-		IAI47_00405	0.69	+0.1
90,822	-		IAI47_00405	0.69	+0.6
90,827	+		IAI47_00405	0.70	-3.3
90,827	+		IAI47_00405	0.70	-0.0
90,828	-		IAI47_00405	0.70	+0.6
90,866	+		IAI47_00405	0.78	+0.8
90,866	+		IAI47_00405	0.78	+0.3
90,866	+		IAI47_00405	0.78	+0.9
90,866	+		IAI47_00405	0.78	-1.1
90,866	+		IAI47_00405	0.78	+0.7
90,866	+		IAI47_00405	0.78	+1.0
90,867	-		IAI47_00405	0.78	-2.4
90,867	-		IAI47_00405	0.78	+0.1
90,890	+		IAI47_00405	0.83	-1.9
90,890	+		IAI47_00405	0.83	-0.9
90,918	+		IAI47_00405	0.88	+0.8
90,918	+		IAI47_00405	0.88	-2.0
90,932	+				+0.6
90,933	-				+0.4
90,963	+				-0.1
90,963	+				-1.5
90,963	+				+1.4
90,963	+				+0.3
90,963	+				-1.3
90,963	+				+2.5
90,964	-				-1.0
90,964	-				-1.2
90,964	-				+2.2
90,970	-				-2.0
90,977	+				+0.4
90,977	+				+2.2
90,977	+				+3.5
90,977	+				+1.5
90,977	+				+2.5
90,977	+				+0.1
90,977	+				-0.9
90,977	+				+0.8
90,977	+				+1.1
90,977	+				+0.7
90,977	+				-2.5
90,977	+				+0.1
90,977	+				-0.3
90,977	+				+3.3
90,977	+				-0.5
90,977	+				+1.1
90,977	+				-2.0
90,978	-				-1.3
90,978	-				-1.2
90,978	-				+1.0
90,978	-				+2.1
90,978	-				+1.2
90,978	-				+1.0
90,978	-				+0.1
90,978	-				-0.6
90,978	-				-0.6
90,978	-				+0.8
90,978	-				+0.5
90,978	-				-1.2
90,978	-				+0.7
91,008	+				-0.2
91,008	+				-1.8
91,008	+				-2.0
91,008	+				-1.5
91,008	+				-2.1
91,009	-				+0.7
91,011	+				-1.6
91,011	+				+1.2
91,011	+				-1.0
91,012	-				-0.7
91,012	-				+0.6
91,012	-				-1.6
91,012	-				-0.3
91,012	-				-0.3
91,012	-				-0.5
91,012	-				-2.3
91,012	-				+0.8
91,012	-				+0.5
91,012	-				-2.2
91,012	-				-0.4
91,014	+				-1.2
91,015	-				+0.9
91,015	-				+0.3
91,015	-				-1.4
91,015	-				+0.9
91,015	-				+0.6
91,048	+		IAI47_00410	0.12	-1.7
91,048	+		IAI47_00410	0.12	-1.9
91,048	+		IAI47_00410	0.12	-1.8
91,049	-		IAI47_00410	0.12	-1.9
91,083	+		IAI47_00410	0.18	+0.5
91,083	+		IAI47_00410	0.18	-0.1
91,083	+		IAI47_00410	0.18	-3.0
91,083	+		IAI47_00410	0.18	+0.9
91,084	-		IAI47_00410	0.19	+0.3
91,084	-		IAI47_00410	0.19	-2.2
91,084	-		IAI47_00410	0.19	+0.5
91,084	-		IAI47_00410	0.19	-3.0
91,084	-		IAI47_00410	0.19	-1.8
91,084	-		IAI47_00410	0.19	+0.6
91,084	-		IAI47_00410	0.19	-2.4
91,084	-		IAI47_00410	0.19	-1.9
91,084	-		IAI47_00410	0.19	-1.5
91,084	-		IAI47_00410	0.19	-3.7
91,109	+		IAI47_00410	0.23	-1.7
91,109	+		IAI47_00410	0.23	+0.4
91,110	-		IAI47_00410	0.23	+1.1
91,110	-		IAI47_00410	0.23	-0.2
91,110	-		IAI47_00410	0.23	+0.6
91,110	-		IAI47_00410	0.23	-1.7
91,115	+		IAI47_00410	0.24	-0.8
91,115	+		IAI47_00410	0.24	-2.2
91,115	+		IAI47_00410	0.24	+0.1
91,115	+		IAI47_00410	0.24	-1.5
91,115	+		IAI47_00410	0.24	-0.8
91,116	-		IAI47_00410	0.24	-3.8
91,116	-		IAI47_00410	0.24	-1.9
91,116	-		IAI47_00410	0.24	-0.6
91,116	-		IAI47_00410	0.24	-0.6
91,131	+		IAI47_00410	0.27	+0.4
91,131	+		IAI47_00410	0.27	-1.9
91,131	+		IAI47_00410	0.27	-0.9
91,131	+		IAI47_00410	0.27	-1.2
91,132	-		IAI47_00410	0.27	+0.1
91,233	+		IAI47_00410	0.45	-0.5
91,234	-		IAI47_00410	0.45	+0.7
91,251	+		IAI47_00410	0.48	+0.0
91,251	+		IAI47_00410	0.48	+0.3
91,251	+		IAI47_00410	0.48	+1.4
91,252	-		IAI47_00410	0.48	-2.3
91,252	-		IAI47_00410	0.48	-0.1
91,252	-				+0.4
91,304	+		IAI47_00410	0.57	-1.5
91,304	+		IAI47_00410	0.57	-2.4
91,304	+		IAI47_00410	0.57	-1.8
91,304	+		IAI47_00410	0.57	-0.8
91,304	+		IAI47_00410	0.57	+0.1
91,304	+		IAI47_00410	0.57	-0.4
91,304	+		IAI47_00410	0.57	-0.6
91,304	+		IAI47_00410	0.57	-0.8
91,305	-		IAI47_00410	0.57	-2.6
91,305	-		IAI47_00410	0.57	+0.0
91,305	-		IAI47_00410	0.57	-2.7
91,305	-		IAI47_00410	0.57	+0.1
91,305	-		IAI47_00410	0.57	-2.0
91,305	-		IAI47_00410	0.57	-1.8
91,305	-		IAI47_00410	0.57	-1.8
91,305	-		IAI47_00410	0.57	-0.6
91,305	-		IAI47_00410	0.57	-1.9
91,309	-		IAI47_00410	0.58	-0.2
91,309	-		IAI47_00410	0.58	+1.1
91,329	-		IAI47_00410	0.62	-2.8
91,335	-		IAI47_00410	0.63	-1.1
91,356	+		IAI47_00410	0.66	-1.8
91,356	+		IAI47_00410	0.66	-0.6
91,356	+		IAI47_00410	0.66	-1.2
91,357	-		IAI47_00410	0.67	-1.0
91,357	-		IAI47_00410	0.67	-0.3
91,357	-		IAI47_00410	0.67	+0.2
91,366	+		IAI47_00410	0.68	-1.5
91,367	-		IAI47_00410	0.68	-2.2
91,374	-		IAI47_00410	0.70	+1.2
91,374	-		IAI47_00410	0.70	+0.1
91,374	-		IAI47_00410	0.70	-0.7
91,383	+		IAI47_00410	0.71	-1.6
91,383	+		IAI47_00410	0.71	-0.5
91,383	+		IAI47_00410	0.71	+0.8
91,384	-		IAI47_00410	0.71	-1.6
91,384	-		IAI47_00410	0.71	+0.1
91,398	+		IAI47_00410	0.74	-2.3
91,398	+		IAI47_00410	0.74	-1.3
91,398	+		IAI47_00410	0.74	+0.4
91,398	+		IAI47_00410	0.74	-1.2
91,399	-		IAI47_00410	0.74	+0.9
91,399	-		IAI47_00410	0.74	+1.8
91,399	-		IAI47_00410	0.74	-1.5
91,399	-		IAI47_00410	0.74	-0.5
91,399	-		IAI47_00410	0.74	-2.8
91,448	+		IAI47_00410	0.83	+0.6
91,449	-		IAI47_00410	0.83	+0.8
91,474	+		IAI47_00410	0.87	-0.8
91,474	+		IAI47_00410	0.87	-0.1
91,474	+		IAI47_00410	0.87	-1.2
91,475	-		IAI47_00410	0.87	-2.5
91,475	-		IAI47_00410	0.87	-1.5
91,475	-		IAI47_00410	0.87	+1.0
91,475	-		IAI47_00410	0.87	-0.0
91,534	+				-2.3
91,535	-				+1.4
91,537	+				-2.2
91,537	+				-1.0
91,537	+				-2.5
91,538	-				+1.1
91,538	-				+0.1
91,538	-				-0.3
91,538	-				+2.0
91,538	-				+0.6
91,538	-				-2.1
91,538	-				+0.5
91,560	+				+2.4
91,560	+				-1.2
91,561	-				-0.5
91,661	+		IAI47_00415	0.25	-0.2
91,661	+		IAI47_00415	0.25	-0.0
91,718	-		IAI47_00415	0.45	-0.1
91,727	-		IAI47_00415	0.49	-0.3
91,738	+		IAI47_00415	0.53	+0.2
91,738	+		IAI47_00415	0.53	+1.5
91,738	+		IAI47_00415	0.53	-2.5
91,738	+		IAI47_00415	0.53	+1.8
91,738	+		IAI47_00415	0.53	-0.1
91,738	+		IAI47_00415	0.53	-1.2
91,738	+		IAI47_00415	0.53	-2.8
91,738	-		IAI47_00415	0.53	-3.8
91,739	-		IAI47_00415	0.53	-0.5
91,741	+		IAI47_00415	0.54	-0.9
91,741	+		IAI47_00415	0.54	+0.4
91,741	+		IAI47_00415	0.54	-2.1
91,741	+		IAI47_00415	0.54	+0.4
91,741	+		IAI47_00415	0.54	+0.5
91,741	+		IAI47_00415	0.54	-1.7
91,742	-		IAI47_00415	0.54	-1.8
91,742	-		IAI47_00415	0.54	-1.8
91,742	-		IAI47_00415	0.54	+0.0
91,742	-		IAI47_00415	0.54	-2.0
91,746	+		IAI47_00415	0.55	+0.1
91,747	-		IAI47_00415	0.56	+0.4
91,747	-		IAI47_00415	0.56	-0.3
91,755	-		IAI47_00415	0.59	+1.3
91,796	+		IAI47_00415	0.74	-2.2
91,796	+		IAI47_00415	0.74	-0.3
91,806	+		IAI47_00415	0.77	+1.0
91,807	-		IAI47_00415	0.78	-0.2
91,807	-		IAI47_00415	0.78	+1.3
91,853	+				+0.5
91,853	+				+1.0
91,854	-				-0.5
91,854	-				-2.3
91,866	+				+1.3
91,866	+				+0.1
91,866	+				+0.8
91,866	+				+1.4
91,866	+				-0.3
91,866	+				+0.6
91,867	-				-1.3
91,867	-				+0.8
91,867	-				-0.3
91,867	-				-2.9
91,867	-				-0.6
91,867	-				-1.8
91,872	+				+0.3
91,872	+				+1.9
91,885	+				+2.2
91,885	+				-0.8
91,886	-				+0.8
91,886	-				+1.4
91,886	-				+1.2
91,886	-				+1.3
91,891	+				+0.4
91,892	-				+1.0
91,892	-				+1.8
91,892	-				-1.5
91,902	-				+2.1
91,907	+				+1.9
91,907	+				+1.5
91,907	+				-0.2
91,907	+				+1.0
91,907	+				-1.6
91,908	-				+0.8
91,908	-				-0.8
91,908	-				+1.0
91,908	-				-1.4
91,908	-				-0.0
91,931	+				+1.8
92,022	+		IAI47_00420	0.11	-1.2
92,023	-		IAI47_00420	0.11	+1.0
92,037	+		IAI47_00420	0.12	-0.1
92,037	+		IAI47_00420	0.12	+2.0
92,038	-		IAI47_00420	0.13	-0.6
92,038	-		IAI47_00420	0.13	-0.4
92,067	+		IAI47_00420	0.16	-0.1
92,067	+		IAI47_00420	0.16	+0.4
92,067	+		IAI47_00420	0.16	-1.7
92,067	+		IAI47_00420	0.16	+1.7
92,067	+		IAI47_00420	0.16	+0.3
92,068	-		IAI47_00420	0.16	-0.6
92,068	-		IAI47_00420	0.16	+0.1
92,068	-		IAI47_00420	0.16	+0.9
92,068	-		IAI47_00420	0.16	+0.5
92,068	-		IAI47_00420	0.16	+0.4
92,068	-		IAI47_00420	0.16	-0.2
92,068	-		IAI47_00420	0.16	-0.5
92,068	-		IAI47_00420	0.16	+0.0
92,068	-		IAI47_00420	0.16	-0.9
92,068	-		IAI47_00420	0.16	+0.7
92,068	-		IAI47_00420	0.16	+0.3
92,068	-		IAI47_00420	0.16	-1.1
92,071	+		IAI47_00420	0.16	+1.5
92,071	+		IAI47_00420	0.16	+2.9
92,071	+		IAI47_00420	0.16	+0.8
92,071	+		IAI47_00420	0.16	+0.4
92,072	-		IAI47_00420	0.16	-1.6
92,072	-		IAI47_00420	0.16	-0.9
92,130	+		IAI47_00420	0.22	+0.7
92,130	+		IAI47_00420	0.22	-1.0
92,130	+		IAI47_00420	0.22	-0.5
92,130	+		IAI47_00420	0.22	-1.2
92,130	+		IAI47_00420	0.22	-0.0
92,130	+		IAI47_00420	0.22	+0.9
92,130	+		IAI47_00420	0.22	-1.0
92,131	-		IAI47_00420	0.22	-1.3
92,131	-		IAI47_00420	0.22	+0.6
92,131	-		IAI47_00420	0.22	-2.6
92,253	+		IAI47_00420	0.34	+2.3
92,253	+		IAI47_00420	0.34	+1.3
92,253	+		IAI47_00420	0.34	-0.2
92,253	+		IAI47_00420	0.34	-0.5
92,253	+		IAI47_00420	0.34	+0.4
92,253	+		IAI47_00420	0.34	+1.4
92,253	+		IAI47_00420	0.34	-0.7
92,253	+		IAI47_00420	0.34	-0.0
92,254	-		IAI47_00420	0.34	-1.0
92,254	-		IAI47_00420	0.34	+0.5
92,254	-		IAI47_00420	0.34	-1.8
92,254	-		IAI47_00420	0.34	+1.1
92,255	+		IAI47_00420	0.35	+0.9
92,332	+		IAI47_00420	0.42	-0.3
92,333	-		IAI47_00420	0.42	-0.2
92,353	+		IAI47_00420	0.44	-0.2
92,353	+		IAI47_00420	0.44	-0.1
92,353	+		IAI47_00420	0.44	-0.1
92,354	-		IAI47_00420	0.45	+1.1
92,354	-		IAI47_00420	0.45	+1.2
92,354	-		IAI47_00420	0.45	+0.9
92,367	+		IAI47_00420	0.46	+1.3
92,367	+		IAI47_00420	0.46	-0.9
92,367	+		IAI47_00420	0.46	-2.3
92,367	+		IAI47_00420	0.46	+0.7
92,368	-		IAI47_00420	0.46	-1.6
92,368	-		IAI47_00420	0.46	+3.6
92,368	-		IAI47_00420	0.46	-0.2
92,368	-		IAI47_00420	0.46	-1.4
92,368	-		IAI47_00420	0.46	-2.4
92,370	-		IAI47_00420	0.46	+0.1
92,407	+		IAI47_00420	0.50	+1.5
92,407	+		IAI47_00420	0.50	-0.2
92,408	-		IAI47_00420	0.50	-0.3
92,408	-		IAI47_00420	0.50	+0.6
92,423	+		IAI47_00420	0.52	-0.4
92,423	+		IAI47_00420	0.52	+1.8
92,423	+		IAI47_00420	0.52	-2.2
92,424	-		IAI47_00420	0.52	-0.0
92,424	-		IAI47_00420	0.52	+0.8
92,424	-		IAI47_00420	0.52	+0.8
92,450	+		IAI47_00420	0.54	-1.8
92,450	+		IAI47_00420	0.54	-0.4
92,451	-		IAI47_00420	0.54	-3.7
92,451	-		IAI47_00420	0.54	+1.3
92,462	+		IAI47_00420	0.56	+0.6
92,462	+		IAI47_00420	0.56	+1.2
92,462	+		IAI47_00420	0.56	-1.8
92,462	+		IAI47_00420	0.56	-2.5
92,462	+		IAI47_00420	0.56	-1.5
92,463	-		IAI47_00420	0.56	+1.4
92,463	-		IAI47_00420	0.56	+0.5
92,463	-		IAI47_00420	0.56	-0.1
92,486	+		IAI47_00420	0.58	-0.6
92,486	+		IAI47_00420	0.58	+1.0
92,486	+		IAI47_00420	0.58	-0.3
92,487	-		IAI47_00420	0.58	+3.0
92,487	-		IAI47_00420	0.58	+0.1
92,487	-		IAI47_00420	0.58	-2.2
92,487	-		IAI47_00420	0.58	-1.3
92,500	+		IAI47_00420	0.59	-2.2
92,500	+		IAI47_00420	0.59	-0.3
92,506	+		IAI47_00420	0.60	+0.9
92,506	+		IAI47_00420	0.60	+0.1
92,506	+		IAI47_00420	0.60	+1.6
92,506	+		IAI47_00420	0.60	+0.0
92,506	+		IAI47_00420	0.60	+2.1
92,506	+		IAI47_00420	0.60	+0.5
92,506	+		IAI47_00420	0.60	-0.1
92,507	-		IAI47_00420	0.60	-3.2
92,507	-		IAI47_00420	0.60	-3.2
92,507	-		IAI47_00420	0.60	+0.2
92,507	-		IAI47_00420	0.60	-0.8
92,507	-		IAI47_00420	0.60	+1.2
92,507	-		IAI47_00420	0.60	+0.6
92,529	-		IAI47_00420	0.62	-0.2
92,531	+		IAI47_00420	0.63	+1.0
92,531	+		IAI47_00420	0.63	+1.3
92,532	-		IAI47_00420	0.63	-0.9
92,532	-		IAI47_00420	0.63	-1.4