Strain Fitness in Pantoea sp. MT58 around IAI47_17215

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,642,197	+		IAI47_17210	0.87	+0.4
3,642,198	-		IAI47_17210	0.87	-0.8
3,642,198	-		IAI47_17210	0.87	+0.5
3,642,202	+		IAI47_17210	0.87	-0.5
3,642,203	-		IAI47_17210	0.88	-0.8
3,642,227	+				+0.7
3,642,227	+				+0.5
3,642,227	+				-0.6
3,642,228	-				-1.4
3,642,228	-				+0.5
3,642,228	-				-0.2
3,642,228	-				-1.4
3,642,233	+				-0.2
3,642,233	+				+0.2
3,642,233	+				+0.7
3,642,233	+				+0.6
3,642,234	-				-0.6
3,642,234	-				-3.2
3,642,234	-				+2.3
3,642,259	+				-1.6
3,642,260	-				+0.4
3,642,260	-				+0.7
3,642,260	-				+0.1
3,642,260	-				+0.8
3,642,280	+				+0.6
3,642,280	+				+1.1
3,642,280	+				-1.5
3,642,280	+				+0.7
3,642,281	-				-2.4
3,642,281	-				-0.6
3,642,281	-				+0.2
3,642,281	-				+1.8
3,642,281	-				-0.5
3,642,281	-				+0.3
3,642,337	+				-0.5
3,642,337	+				-1.2
3,642,337	+				+2.7
3,642,338	-				-0.2
3,642,338	-				+0.3
3,642,338	-				+0.2
3,642,350	+				+0.2
3,642,365	-				+0.4
3,642,405	-				+1.1
3,642,445	+				-1.0
3,642,487	+				-0.4
3,642,488	-				-1.7
3,642,497	+				+0.2
3,642,512	+				-0.7
3,642,513	-				+0.6
3,642,513	-				+0.5
3,642,520	+				+0.1
3,642,521	-				+0.2
3,642,521	-				-0.9
3,642,524	-				+0.5
3,642,530	+				+1.8
3,642,533	+				-0.8
3,642,534	-				-0.6
3,642,557	+				-0.0
3,642,558	-				+0.9
3,642,563	+				+1.6
3,642,564	-				+0.3
3,642,596	+				-0.1
3,642,596	+				+3.5
3,642,604	-				-0.6
3,642,620	-				+2.3
3,642,621	+				-0.6
3,642,621	+				-1.8
3,642,622	-				-1.2
3,642,622	-				+2.5
3,642,632	+				+0.6
3,642,632	+				-0.0
3,642,632	+				+4.8
3,642,633	-				+0.2
3,642,633	-				-0.1
3,642,643	+				+0.2
3,642,644	-				-1.3
3,642,644	-				+1.3
3,642,665	+				+1.8
3,642,665	+				-0.6
3,642,666	-				-1.1
3,642,686	+				+1.2
3,642,687	-				+1.5
3,642,687	-				-0.7
3,642,792	+				-0.3
3,642,843	+				-0.2
3,642,881	+				+0.7
3,642,881	+				-0.1
3,642,881	+				-0.8
3,642,881	+				+1.4
3,642,882	-				-1.0
3,642,882	-				-0.7
3,642,888	-				-1.9
3,642,905	+				+1.3
3,642,906	-				+1.9
3,642,925	+				-0.0
3,642,926	-				+1.4
3,642,926	-				-1.5
3,642,935	-				+1.0
3,642,947	+				+1.8
3,642,947	+				-1.0
3,642,948	-				-0.2
3,642,948	-				+0.6
3,642,948	-				-0.9
3,642,969	-				+2.2
3,642,980	+				-1.6
3,642,998	+				+0.8
3,643,010	+				+0.4
3,643,044	+				-1.1
3,643,045	-				+0.1
3,643,052	+				-0.6
3,643,052	+				-0.6
3,643,062	-				+1.4
3,643,069	-				+0.9
3,643,084	+				-0.2
3,643,084	+				-0.2
3,643,084	+				-0.5
3,643,084	+				-0.0
3,643,085	-				+0.4
3,643,085	-				+1.1
3,643,085	-				-0.2
3,643,085	-				+0.6
3,643,088	+				-0.4
3,643,089	-				+2.1
3,643,089	-				+0.3
3,643,089	-				+0.5
3,643,089	-				-0.4
3,643,089	-				+0.5
3,643,091	-				-0.7
3,643,094	+				+0.1
3,643,094	+				-0.7
3,643,094	+				+0.1
3,643,094	+				+0.6
3,643,094	+				+0.1
3,643,095	-				-0.2
3,643,095	-				-0.8
3,643,095	-				-1.2
3,643,095	-				+0.1
3,643,095	-				+1.3
3,643,095	-				+0.8
3,643,095	-				+0.1
3,643,095	-				-0.0
3,643,095	-				+0.3
3,643,095	-				+0.7
3,643,095	-				+0.4
3,643,095	-				+0.4
3,643,099	+				-0.4
3,643,099	+				+0.3
3,643,135	-				-1.6
3,643,179	-				+0.6
3,643,590	-		IAI47_17215	0.18	-0.0
3,645,148	-		IAI47_17215	0.84	-2.0
3,645,303	-				-0.4
3,645,319	-				+0.0
3,645,319	-				-1.9
3,645,319	-				-1.0
3,645,473	-				+1.3
3,645,483	-				-0.9
3,645,483	-				-2.4
3,645,483	-				-1.0
3,645,483	-				-2.0
3,645,483	-				-1.8
3,645,483	-				-1.6
3,645,483	-				-1.6
3,645,486	-				-0.2
3,645,486	-				-0.2
3,645,486	-				-1.4
3,645,514	-				-1.6
3,645,514	-				+0.0
3,645,514	-				-0.8
3,645,543	+				-2.0
3,645,543	+				-0.0
3,645,543	+				-0.6
3,645,544	-				-1.7
3,645,544	-				-0.9
3,645,547	-				-1.6
3,645,547	-				+1.1
3,645,556	-				-0.1
3,645,609	+				-0.9
3,645,609	+				-1.3
3,645,609	+				+0.1
3,645,609	+				-0.4
3,645,609	+				-0.3
3,645,610	-				+1.4
3,645,610	-				-0.0
3,645,686	+				+0.3
3,645,686	+				-0.1
3,645,686	+				-0.3
3,645,687	-				-0.1
3,645,687	-				-1.6
3,645,740	+				-0.7
3,645,779	-				-0.8
3,645,780	+				+1.3
3,645,780	+				+0.6
3,645,780	+				-1.0
3,645,781	-				-2.5
3,645,781	-				+1.3
3,645,781	-				-1.6
3,645,781	-				+0.6
3,645,781	-				-1.8
3,645,786	+				+0.1
3,645,787	-				-0.1
3,645,800	+				-0.6
3,645,811	+				+1.3
3,645,840	+				-0.3
3,645,842	+				-1.1
3,645,842	+				-0.7
3,645,842	+				-1.8
3,645,843	-				-0.7
3,645,843	-				+0.4
3,645,866	+				+0.1
3,645,876	+				+0.3
3,645,876	+				+2.0
3,645,876	+				-0.5
3,645,877	-				+0.0
3,645,877	-				+0.8
3,645,889	+				+1.5
3,645,889	+				-0.1
3,645,889	+				-0.3
3,645,889	+				-0.4
3,645,889	+				+0.0
3,645,889	+				-0.3
3,645,890	-				-0.3
3,645,896	+				-0.3
3,645,896	+				+1.5
3,645,896	+				+0.6
3,645,896	+				+0.4
3,645,896	+				+2.4
3,645,896	+				-0.6
3,645,896	+				+2.4
3,645,896	+				-0.3
3,645,896	+				-0.8
3,645,896	+				+0.2
3,645,896	+				+1.0
3,645,896	+				+0.5
3,645,897	-				+0.9
3,645,897	-				+0.1
3,645,897	-				-1.6
3,645,897	-				+1.2
3,645,897	-				-1.2
3,645,897	-				-1.4
3,645,897	-				-0.8
3,645,923	+				+1.4
3,645,923	+				+0.3
3,645,923	+				-0.5
3,645,923	+				-0.2
3,645,923	+				-0.5
3,645,924	-				+1.5
3,645,924	-				-2.5
3,645,924	-				-0.2
3,645,924	-				-1.5
3,645,924	-				-0.5
3,645,933	+				+0.5
3,645,977	+				-1.4
3,645,978	-				+0.7
3,645,978	-				-1.9
3,645,978	-				-1.9
3,645,978	-				+2.8
3,645,978	-				-0.3
3,645,978	-				+0.1
3,646,028	-				-0.8
3,646,052	+				-1.2
3,646,070	-				+1.3
3,646,117	+				-0.4
3,646,117	+				-2.1
3,646,117	+				+0.4
3,646,118	-				-0.0
3,646,118	-				+0.1
3,646,179	+				+1.1
3,646,180	-				+1.1
3,646,180	-				+1.3
3,646,180	-				+0.1
3,646,183	+				-0.3
3,646,183	+				-0.5
3,646,183	+				+0.6
3,646,183	+				-0.4
3,646,183	+				+0.1
3,646,183	+				+0.1
3,646,183	+				+3.2
3,646,184	-				+1.7
3,646,184	-				-0.1
3,646,184	-				-0.7
3,646,184	-				-1.1
3,646,184	-				-0.9
3,646,184	-				+1.9
3,646,184	-				-1.1
3,646,184	-				-0.1
3,646,184	-				+0.4
3,646,184	-				-1.1
3,646,184	-				-0.9
3,646,184	-				+1.7
3,646,211	+				-1.5
3,646,211	+				-0.9
3,646,212	-				-0.1
3,646,212	-				+1.0
3,646,212	-				+0.9
3,646,225	+				+0.3
3,646,226	-				-1.4
3,646,256	+				+0.2
3,646,256	+				-0.9
3,646,256	+				+3.5
3,646,256	+				-1.7
3,646,257	-				-0.8
3,646,257	-				+0.1
3,646,257	-				+0.5
3,646,257	-				-1.3
3,646,257	-				-0.7
3,646,267	+				-0.2
3,646,268	-				+1.1
3,646,297	+				+1.4
3,646,297	+				-0.8
3,646,298	-				+0.2
3,646,298	-				-0.5
3,646,298	-				+2.4
3,646,298	-				+2.2
3,646,298	-				+2.6
3,646,298	-				+1.0
3,646,335	+				+0.4
3,646,335	+				+0.3
3,646,373	+				+0.6
3,646,374	-				-0.6
3,646,374	-				-0.0
3,646,374	-				+0.5
3,646,374	-				+0.8
3,646,374	-				-0.6
3,646,374	-				+2.9
3,646,374	-				-1.7
3,646,374	-				-0.8
3,646,374	-				-1.6
3,646,389	+				-0.3
3,646,411	+				-0.4
3,646,412	-				-1.6
3,646,427	+				-0.3
3,646,427	+				-1.1
3,646,427	+				-0.2
3,646,427	+				+1.6
3,646,427	+				-0.6
3,646,428	-				+0.8
3,646,428	-				-0.1
3,646,428	-				+1.9
3,646,436	+				+1.1
3,646,436	+				-1.5
3,646,436	+				+0.9
3,646,436	+				+1.8
3,646,436	+				+0.1
3,646,436	+				-2.2
3,646,436	+				-0.6
3,646,436	+				-0.7
3,646,436	+				+0.3
3,646,436	+				+0.1
3,646,437	-				+0.2
3,646,437	-				-0.0
3,646,437	-				+1.0
3,646,437	-				-1.2
3,646,437	-				+0.4
3,646,437	-				-1.7
3,646,437	-				+0.7
3,646,470	+				+1.9
3,646,470	+				+0.6
3,646,470	+				+0.0
3,646,471	-				-1.5
3,646,471	-				-1.1
3,646,471	-				+0.1
3,646,471	-				+0.1
3,646,480	+				-0.5
3,646,481	-				-0.4