Strain Fitness in Pantoea sp. MT58 around IAI47_15540

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,272,105	-				+0.4
3,272,138	-				-1.5
3,272,138	-				-0.8
3,272,138	-				-0.5
3,272,163	+				-1.3
3,272,163	+				+0.2
3,272,164	-				-1.2
3,272,164	-				+0.4
3,272,164	-				-0.0
3,272,164	-				+0.4
3,272,164	-				+0.0
3,272,183	+				-0.9
3,272,183	+				-0.1
3,272,184	-				-0.5
3,272,184	-				-0.4
3,272,184	-				-1.0
3,272,184	-				-0.4
3,272,186	+				+2.6
3,272,216	-				+0.1
3,272,350	+		IAI47_15535	0.16	+0.3
3,272,350	+		IAI47_15535	0.16	+0.3
3,272,351	-		IAI47_15535	0.16	-0.7
3,272,351	-		IAI47_15535	0.16	-0.5
3,272,351	-		IAI47_15535	0.16	-0.0
3,272,351	-		IAI47_15535	0.16	-0.1
3,272,351	-		IAI47_15535	0.16	-1.1
3,272,351	-		IAI47_15535	0.16	-0.2
3,272,405	+		IAI47_15535	0.23	+1.0
3,272,406	-		IAI47_15535	0.23	-0.2
3,272,497	+		IAI47_15535	0.35	-1.1
3,272,507	-		IAI47_15535	0.36	-0.9
3,272,534	+		IAI47_15535	0.39	+0.4
3,272,535	-		IAI47_15535	0.39	-0.4
3,272,545	+		IAI47_15535	0.41	+1.7
3,272,546	-		IAI47_15535	0.41	-1.7
3,272,546	-		IAI47_15535	0.41	-0.8
3,272,560	+		IAI47_15535	0.43	+0.0
3,272,560	+		IAI47_15535	0.43	-0.2
3,272,560	+		IAI47_15535	0.43	-0.2
3,272,561	-		IAI47_15535	0.43	-0.8
3,272,561	-		IAI47_15535	0.43	+1.1
3,272,569	+		IAI47_15535	0.44	+0.0
3,272,569	+		IAI47_15535	0.44	-0.3
3,272,569	+		IAI47_15535	0.44	+0.1
3,272,569	+		IAI47_15535	0.44	-1.0
3,272,570	-		IAI47_15535	0.44	+0.3
3,272,570	-		IAI47_15535	0.44	-0.2
3,272,570	-		IAI47_15535	0.44	-2.8
3,272,570	-		IAI47_15535	0.44	-1.2
3,272,578	+		IAI47_15535	0.45	-1.5
3,272,621	+		IAI47_15535	0.50	-0.5
3,272,621	+		IAI47_15535	0.50	-0.7
3,272,621	+		IAI47_15535	0.50	+0.9
3,272,621	+		IAI47_15535	0.50	-0.9
3,272,622	-		IAI47_15535	0.50	-0.8
3,272,622	-		IAI47_15535	0.50	-0.5
3,272,687	+		IAI47_15535	0.58	+0.5
3,272,687	+		IAI47_15535	0.58	+0.2
3,272,687	+		IAI47_15535	0.58	+2.3
3,272,687	+		IAI47_15535	0.58	+1.2
3,272,687	+		IAI47_15535	0.58	+3.7
3,272,687	+		IAI47_15535	0.58	-1.5
3,272,687	+		IAI47_15535	0.58	+1.1
3,272,687	+		IAI47_15535	0.58	-2.0
3,272,688	-		IAI47_15535	0.59	+0.2
3,272,688	-		IAI47_15535	0.59	+0.3
3,272,688	-		IAI47_15535	0.59	-1.3
3,272,688	-		IAI47_15535	0.59	-1.2
3,272,688	-		IAI47_15535	0.59	-0.1
3,272,688	-		IAI47_15535	0.59	-0.4
3,272,715	+		IAI47_15535	0.62	-0.1
3,272,716	-		IAI47_15535	0.62	-1.5
3,272,723	+		IAI47_15535	0.63	-0.6
3,272,724	-		IAI47_15535	0.63	-0.3
3,272,769	+		IAI47_15535	0.69	+0.1
3,272,769	+		IAI47_15535	0.69	-0.2
3,272,769	+		IAI47_15535	0.69	-0.9
3,272,770	-		IAI47_15535	0.69	+0.5
3,272,770	-		IAI47_15535	0.69	+1.7
3,272,777	+		IAI47_15535	0.70	-0.6
3,272,777	+		IAI47_15535	0.70	+1.9
3,272,778	-		IAI47_15535	0.70	+0.1
3,272,792	-		IAI47_15535	0.72	+1.2
3,272,806	-		IAI47_15535	0.73	-0.2
3,272,815	+		IAI47_15535	0.75	+0.1
3,272,824	+		IAI47_15535	0.76	-1.2
3,272,824	+		IAI47_15535	0.76	-0.6
3,272,824	+		IAI47_15535	0.76	-0.1
3,272,825	-		IAI47_15535	0.76	+1.0
3,272,825	-		IAI47_15535	0.76	-1.2
3,272,825	-		IAI47_15535	0.76	+1.5
3,272,825	-		IAI47_15535	0.76	+0.5
3,272,825	-		IAI47_15535	0.76	-0.9
3,272,825	-		IAI47_15535	0.76	+0.7
3,272,825	-		IAI47_15535	0.76	+0.1
3,272,829	+		IAI47_15535	0.76	+0.0
3,272,829	+		IAI47_15535	0.76	+0.2
3,272,829	+		IAI47_15535	0.76	-0.9
3,272,830	-		IAI47_15535	0.76	-1.9
3,272,855	+		IAI47_15535	0.80	+0.5
3,272,889	+		IAI47_15535	0.84	-2.7
3,272,890	-		IAI47_15535	0.84	+0.4
3,272,921	+		IAI47_15535	0.88	-1.9
3,272,921	+		IAI47_15535	0.88	-1.0
3,272,922	-		IAI47_15535	0.88	-0.8
3,272,922	-		IAI47_15535	0.88	-0.1
3,272,922	-		IAI47_15535	0.88	-1.7
3,272,922	-		IAI47_15535	0.88	+0.1
3,272,922	-		IAI47_15535	0.88	+0.1
3,272,929	+		IAI47_15535	0.89	-1.2
3,272,929	+		IAI47_15535	0.89	+0.3
3,272,929	+		IAI47_15535	0.89	-0.1
3,272,929	+		IAI47_15535	0.89	+0.7
3,272,929	+		IAI47_15535	0.89	+0.5
3,272,929	+		IAI47_15535	0.89	-0.1
3,272,929	+		IAI47_15535	0.89	+0.4
3,272,929	+		IAI47_15535	0.89	+0.5
3,272,929	+		IAI47_15535	0.89	+0.0
3,272,929	+		IAI47_15535	0.89	-2.5
3,272,929	+		IAI47_15535	0.89	+0.6
3,272,929	+		IAI47_15535	0.89	-0.1
3,272,929	+		IAI47_15535	0.89	+0.7
3,272,930	-		IAI47_15535	0.89	+1.2
3,272,930	-		IAI47_15535	0.89	-0.2
3,272,930	-		IAI47_15535	0.89	-0.3
3,272,930	-		IAI47_15535	0.89	-0.2
3,272,930	-		IAI47_15535	0.89	+1.0
3,272,930	-		IAI47_15535	0.89	-0.1
3,272,930	-		IAI47_15535	0.89	-2.2
3,272,930	-		IAI47_15535	0.89	+1.4
3,272,930	-		IAI47_15535	0.89	+1.7
3,272,930	-		IAI47_15535	0.89	-2.2
3,272,932	+		IAI47_15535	0.89	+0.2
3,272,932	+		IAI47_15535	0.89	-1.3
3,272,932	+		IAI47_15535	0.89	-1.0
3,272,932	+		IAI47_15535	0.89	-0.4
3,272,932	+		IAI47_15535	0.89	+0.6
3,272,932	+		IAI47_15535	0.89	+1.0
3,272,932	+		IAI47_15535	0.89	-0.2
3,272,932	+		IAI47_15535	0.89	+0.4
3,272,932	+		IAI47_15535	0.89	-0.5
3,272,932	+		IAI47_15535	0.89	-1.9
3,272,932	+		IAI47_15535	0.89	-0.6
3,272,932	+		IAI47_15535	0.89	+1.2
3,272,932	+		IAI47_15535	0.89	+1.5
3,272,932	+		IAI47_15535	0.89	+0.1
3,272,932	+		IAI47_15535	0.89	-1.3
3,272,932	+		IAI47_15535	0.89	+0.1
3,272,932	+		IAI47_15535	0.89	-0.2
3,272,932	+		IAI47_15535	0.89	+1.1
3,272,933	-		IAI47_15535	0.89	+1.2
3,272,933	-		IAI47_15535	0.89	+1.0
3,272,933	-		IAI47_15535	0.89	-1.2
3,272,933	-		IAI47_15535	0.89	+0.6
3,272,933	-		IAI47_15535	0.89	-0.2
3,272,933	-		IAI47_15535	0.89	-1.7
3,272,933	-		IAI47_15535	0.89	+0.7
3,272,964	+				+1.0
3,273,014	+				-0.7
3,273,014	+				-1.9
3,273,014	+				+0.2
3,273,015	-				-0.7
3,273,015	-				+1.3
3,273,015	-				+0.9
3,273,015	-				-1.1
3,273,015	-				-0.4
3,273,015	-				+0.7
3,273,348	-				-2.0
3,273,701	+		IAI47_15540	0.23	+1.1
3,273,703	+		IAI47_15540	0.23	-0.6
3,273,704	-		IAI47_15540	0.23	+1.1
3,273,754	+		IAI47_15540	0.25	+0.7
3,273,793	+		IAI47_15540	0.27	-0.8
3,273,966	-		IAI47_15540	0.33	+0.6
3,274,014	-		IAI47_15540	0.35	+1.1
3,274,111	+		IAI47_15540	0.39	-1.0
3,274,112	-		IAI47_15540	0.39	+0.8
3,274,112	-		IAI47_15540	0.39	-0.6
3,274,205	+		IAI47_15540	0.42	+0.5
3,274,205	+		IAI47_15540	0.42	-0.9
3,274,206	-		IAI47_15540	0.42	+0.1
3,274,206	-		IAI47_15540	0.42	+1.4
3,274,206	-		IAI47_15540	0.42	-1.4
3,274,206	-		IAI47_15540	0.42	-0.5
3,274,206	-		IAI47_15540	0.42	-0.7
3,274,229	-		IAI47_15540	0.43	-2.0
3,274,241	+		IAI47_15540	0.44	+0.1
3,274,241	+		IAI47_15540	0.44	+0.8
3,274,241	+		IAI47_15540	0.44	-1.3
3,274,241	+		IAI47_15540	0.44	+0.8
3,274,241	+		IAI47_15540	0.44	-0.8
3,274,242	-		IAI47_15540	0.44	-1.3
3,274,242	-		IAI47_15540	0.44	-1.5
3,274,242	-		IAI47_15540	0.44	+0.0
3,274,285	+		IAI47_15540	0.45	-1.4
3,274,328	-		IAI47_15540	0.47	-0.8
3,274,328	-		IAI47_15540	0.47	+1.5
3,274,328	-		IAI47_15540	0.47	-1.5
3,274,328	-		IAI47_15540	0.47	-0.8
3,274,387	+		IAI47_15540	0.49	+0.2
3,274,403	+		IAI47_15540	0.50	-1.5
3,274,403	+		IAI47_15540	0.50	-0.1
3,274,404	-		IAI47_15540	0.50	-0.6
3,274,406	-		IAI47_15540	0.50	+0.1
3,274,406	-		IAI47_15540	0.50	-0.5
3,274,406	-		IAI47_15540	0.50	-0.3
3,274,423	+		IAI47_15540	0.50	+0.9
3,274,424	-		IAI47_15540	0.51	-0.2
3,274,424	-		IAI47_15540	0.51	-2.3
3,274,461	-		IAI47_15540	0.52	-1.0
3,274,477	+		IAI47_15540	0.53	-2.2
3,274,477	+		IAI47_15540	0.53	+0.7
3,274,477	+		IAI47_15540	0.53	-0.4
3,274,477	+		IAI47_15540	0.53	+0.1
3,274,477	+		IAI47_15540	0.53	-1.2
3,274,477	+		IAI47_15540	0.53	-1.0
3,274,477	+		IAI47_15540	0.53	+0.9
3,274,477	+		IAI47_15540	0.53	-1.2
3,274,477	+		IAI47_15540	0.53	+0.7
3,274,478	-		IAI47_15540	0.53	-0.7
3,274,478	-		IAI47_15540	0.53	+0.2
3,274,478	-		IAI47_15540	0.53	-0.6
3,274,478	-		IAI47_15540	0.53	+0.7
3,274,478	-		IAI47_15540	0.53	+0.2
3,274,478	-		IAI47_15540	0.53	+1.4
3,274,480	+		IAI47_15540	0.53	+0.1
3,274,480	+		IAI47_15540	0.53	+1.3
3,274,480	+		IAI47_15540	0.53	-1.2
3,274,480	+		IAI47_15540	0.53	-0.9
3,274,480	+		IAI47_15540	0.53	-0.4
3,274,480	+		IAI47_15540	0.53	+1.3
3,274,481	-		IAI47_15540	0.53	-1.1
3,274,481	-		IAI47_15540	0.53	-1.1
3,274,481	-		IAI47_15540	0.53	+0.0
3,274,481	-		IAI47_15540	0.53	+0.7
3,274,554	+		IAI47_15540	0.55	+3.8
3,274,554	+		IAI47_15540	0.55	-1.5
3,274,554	+		IAI47_15540	0.55	+0.1
3,274,609	+		IAI47_15540	0.57	+0.2
3,274,609	+		IAI47_15540	0.57	+1.3
3,274,610	-		IAI47_15540	0.58	+0.0
3,274,639	+		IAI47_15540	0.59	-0.7
3,274,640	-		IAI47_15540	0.59	-0.5
3,274,640	-		IAI47_15540	0.59	-2.0
3,274,640	-		IAI47_15540	0.59	-0.8
3,274,640	-		IAI47_15540	0.59	-1.5
3,274,687	+		IAI47_15540	0.60	-0.8
3,274,687	+		IAI47_15540	0.60	-0.4
3,274,687	+		IAI47_15540	0.60	-1.1
3,274,687	+		IAI47_15540	0.60	-0.6
3,274,687	+		IAI47_15540	0.60	-0.4
3,274,688	-		IAI47_15540	0.60	+1.0
3,274,688	-		IAI47_15540	0.60	+0.9
3,274,830	-		IAI47_15540	0.66	-1.2
3,274,905	+		IAI47_15540	0.69	+0.5
3,275,075	+		IAI47_15540	0.75	-1.5
3,275,089	+		IAI47_15540	0.76	+2.2
3,275,198	-		IAI47_15540	0.80	-0.3
3,275,315	-				-0.9
3,275,320	+		IAI47_15540	0.84	-0.3
3,275,320	+		IAI47_15540	0.84	-0.9
3,275,321	-		IAI47_15540	0.84	+1.5
3,275,635	-				-0.1
3,275,716	+				-0.3
3,275,717	-				+0.4
3,275,728	+				+0.6
3,275,728	+				-0.6
3,275,753	-				+0.5
3,275,759	+				-0.8
3,275,759	+				-0.5
3,275,759	+				+0.1
3,275,759	+				-2.6
3,275,759	+				-0.0
3,275,759	+				+1.1
3,275,759	+				-1.4
3,275,760	-				-1.5
3,275,760	-				+0.0
3,275,764	+				+0.2
3,275,764	+				-1.8
3,275,764	+				-1.0
3,275,764	+				+0.2
3,275,764	+				-0.5
3,275,764	+				-0.3
3,275,764	+				-1.3
3,275,764	+				-0.5
3,275,764	+				+2.1
3,275,764	+				-1.8
3,276,686	+				+0.1
3,276,692	+				-0.4
3,276,692	+				+1.1
3,276,693	-				+0.9