Strain Fitness in Pantoea sp. MT58 around IAI47_14965

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,154,368	-				-0.3
3,154,368	-				+0.6
3,154,370	+				+0.1
3,154,370	+				-0.9
3,154,370	+				-0.3
3,154,370	+				-0.5
3,154,370	+				-0.6
3,154,371	-				-0.8
3,154,371	-				+0.2
3,154,371	-				+0.8
3,154,371	-				+0.1
3,154,371	-				+0.6
3,154,371	-				+0.9
3,154,371	-				+0.9
3,154,397	-				+0.4
3,154,443	+				+1.2
3,154,443	+				-0.2
3,154,444	-				+1.1
3,154,480	+				-1.4
3,154,480	+				+3.6
3,154,480	+				-1.1
3,154,480	+				+1.4
3,154,480	+				-0.5
3,154,480	+				-0.6
3,154,481	-				+0.2
3,154,481	-				-1.9
3,154,481	-				+0.1
3,154,481	-				+0.4
3,154,481	-				+0.2
3,154,481	-				-0.4
3,154,517	+				+0.2
3,154,518	-				-1.3
3,154,518	-				+0.8
3,154,526	+				-1.1
3,154,526	+				-0.4
3,154,526	+				-2.2
3,154,527	-				+0.1
3,154,527	-				+0.6
3,154,527	-				-0.2
3,154,527	-				-0.4
3,154,578	+				+2.4
3,154,599	-				-1.1
3,154,599	-				+2.2
3,154,604	-				+1.6
3,154,604	-				-0.1
3,154,604	-				-1.5
3,154,706	-				+0.4
3,154,715	-		IAI47_14955	0.12	+0.9
3,154,828	+		IAI47_14955	0.49	-0.2
3,154,828	+		IAI47_14955	0.49	-2.9
3,154,829	-		IAI47_14955	0.50	+0.7
3,154,968	-				-0.8
3,154,968	-				-1.3
3,154,987	+				+0.3
3,154,987	+				-0.1
3,154,987	+				-2.3
3,154,988	-				-0.0
3,154,988	-				-1.4
3,155,010	+				-0.5
3,155,011	-				-0.0
3,155,011	-				+0.8
3,155,011	-				+0.1
3,155,011	-				-0.4
3,155,013	+				-1.0
3,155,013	+				-0.6
3,155,013	+				-2.0
3,155,014	-				+0.3
3,155,014	-				+2.0
3,155,028	+				-2.5
3,155,029	-				+1.3
3,155,098	+				-0.2
3,155,098	+				-0.7
3,155,099	-				+0.1
3,155,131	+		IAI47_14960	0.15	-0.4
3,155,131	+		IAI47_14960	0.15	+1.4
3,155,131	+		IAI47_14960	0.15	-1.8
3,155,132	-		IAI47_14960	0.15	-0.4
3,155,132	-		IAI47_14960	0.15	+0.5
3,155,132	-		IAI47_14960	0.15	+0.1
3,155,132	-		IAI47_14960	0.15	-0.0
3,155,183	+		IAI47_14960	0.35	-0.1
3,155,183	+		IAI47_14960	0.35	-1.3
3,155,319	+		IAI47_14960	0.88	+1.5
3,155,320	-		IAI47_14960	0.89	+1.0
3,155,320	-		IAI47_14960	0.89	-0.3
3,155,325	+				+0.4
3,155,326	-				-0.1
3,155,382	+		IAI47_14965	0.18	-0.9
3,155,435	+		IAI47_14965	0.46	-0.1
3,155,446	+		IAI47_14965	0.52	-0.1
3,155,517	-		IAI47_14965	0.89	+0.2
3,155,517	-		IAI47_14965	0.89	+1.9
3,155,552	-				+3.7
3,155,563	-				-1.5
3,155,624	+				-0.3
3,155,624	+				+0.8
3,155,624	+				-0.9
3,155,625	-				-0.7
3,155,634	+				-0.8
3,155,634	+				-0.8
3,155,634	+				-0.5
3,155,634	+				-0.9
3,155,634	+				-0.1
3,155,635	-				+1.1
3,155,635	-				-0.6
3,155,635	-				-0.1
3,155,635	-				+1.5
3,155,635	-				+1.5
3,155,646	+				-1.8
3,155,647	-				-0.2
3,155,669	+				+0.5
3,155,669	+				+0.0
3,155,670	-				-1.2
3,155,679	+				-0.5
3,155,679	+				-0.5
3,155,680	-				-1.7
3,155,680	-				-0.3
3,155,684	+				+2.3
3,155,684	+				-0.5
3,155,684	+				+0.6
3,155,684	+				+1.2
3,155,684	+				-1.2
3,155,684	+				+1.5
3,155,684	+				+0.5
3,155,685	-				-0.2
3,155,685	-				-1.1
3,155,685	-				+1.4
3,155,685	-				+0.6
3,155,685	-				-0.1
3,155,685	-				+0.9
3,155,685	-				+2.0
3,155,685	-				+1.0
3,155,685	-				-3.1
3,155,685	-				-0.5
3,155,688	+				-0.9
3,155,688	+				-0.8
3,155,688	+				+1.1
3,155,688	+				+0.8
3,155,688	+				-0.5
3,155,688	+				+0.7
3,155,689	-				+2.7
3,155,689	-				+0.8
3,155,718	+				-1.0
3,155,718	+				-0.8
3,155,718	+				-1.8
3,155,718	+				-1.0
3,155,718	+				+1.3
3,155,718	+				+0.5
3,155,718	+				-0.0
3,155,718	+				+0.6
3,155,718	+				-0.8
3,155,719	-				+0.1
3,155,719	-				-0.2
3,155,719	-				-2.8
3,155,768	+				-0.1
3,155,791	+				-0.9
3,155,791	+				+0.1
3,155,791	+				+0.9
3,155,792	-				-0.6
3,155,792	-				+0.3
3,155,799	+				-2.7
3,155,800	-				+0.9
3,155,800	-				-1.1
3,155,808	+				+0.8
3,155,808	+				-1.6
3,155,808	+				+1.4
3,155,808	+				-3.1
3,155,808	+				+2.3
3,155,809	-				+0.5
3,155,809	-				+0.7
3,155,809	-				-0.4
3,155,818	+				+1.3
3,155,819	-				+0.6
3,155,819	-				+0.1
3,155,845	-				+0.4
3,155,853	+				-0.9
3,155,853	+				+0.7
3,155,854	-				-0.6
3,155,854	-				+0.8
3,155,854	-				+1.6
3,155,854	-				-0.4
3,155,854	-				-0.8
3,155,861	+				-0.2
3,155,884	-				-0.1
3,155,884	-				-0.6
3,155,924	+				-1.6
3,155,931	+				-0.3
3,155,955	+				-1.5
3,155,955	+				+0.5
3,155,956	-				+0.7
3,156,120	+				-0.5
3,156,120	+				+0.3
3,156,120	+				-0.0
3,156,120	+				-1.9
3,156,120	+				-0.9
3,156,120	+				+0.0
3,156,121	-				-0.1
3,156,121	-				+0.4
3,156,121	-				+1.2
3,156,121	-				-0.5
3,156,121	-				-0.6
3,156,121	-				-0.7
3,156,121	-				-0.1
3,156,121	-				-1.1
3,156,121	-				-1.6
3,156,121	-				+0.9
3,156,124	+				+0.5
3,156,124	+				+0.1
3,156,124	+				+0.2
3,156,125	-				-0.5
3,156,125	-				+2.7
3,156,125	-				+0.1
3,156,125	-				+0.9
3,156,125	-				-2.0
3,156,161	+				-1.3
3,156,162	-				+0.7
3,156,204	+				+0.1
3,156,205	-				-0.1
3,156,238	+				+1.6
3,156,238	+				-0.9
3,156,238	+				-0.7
3,156,239	-				-1.4
3,156,248	+				-1.3
3,156,248	+				-0.4
3,156,248	+				-0.4
3,156,248	+				+0.3
3,156,248	+				+0.3
3,156,248	+				-1.2
3,156,248	+				-0.4
3,156,248	+				+0.7
3,156,248	+				-0.2
3,156,248	+				+0.9
3,156,249	-				-0.1
3,156,249	-				-0.3
3,156,249	-				+0.6
3,156,249	-				-0.1
3,156,249	-				+2.1
3,156,249	-				+0.2
3,156,249	-				+0.5
3,156,249	-				-0.8
3,156,249	-				-0.5
3,156,249	-				-0.1
3,156,249	-				+0.5
3,156,249	-				-0.7
3,156,249	-				+0.8
3,156,249	-				+1.3
3,156,249	-				-1.6
3,156,249	-				-1.7
3,156,377	+		IAI47_14970	0.14	-0.3
3,156,421	+		IAI47_14970	0.15	-0.2
3,156,421	+		IAI47_14970	0.15	+2.2
3,156,421	+		IAI47_14970	0.15	-0.4
3,156,422	-		IAI47_14970	0.15	-0.3
3,156,422	-		IAI47_14970	0.15	-1.9
3,156,526	+		IAI47_14970	0.19	-1.6
3,156,526	+		IAI47_14970	0.19	+0.2
3,156,526	+		IAI47_14970	0.19	-0.1
3,156,526	+		IAI47_14970	0.19	+0.5
3,156,527	-		IAI47_14970	0.19	+0.6
3,156,527	-		IAI47_14970	0.19	+0.7
3,156,527	-		IAI47_14970	0.19	+0.3