Strain Fitness in Pantoea sp. MT58 around IAI47_14535

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,067,555	+		IAI47_14525	0.63	+0.1
3,067,555	+		IAI47_14525	0.63	+1.7
3,067,573	+		IAI47_14525	0.76	-2.2
3,067,573	+		IAI47_14525	0.76	-1.6
3,067,573	+		IAI47_14525	0.76	+0.1
3,067,574	-		IAI47_14525	0.77	-1.3
3,067,574	-		IAI47_14525	0.77	-0.5
3,067,581	+		IAI47_14525	0.82	+2.1
3,067,581	+		IAI47_14525	0.82	+2.5
3,067,581	+		IAI47_14525	0.82	-1.0
3,067,582	-		IAI47_14525	0.82	-1.8
3,067,582	-		IAI47_14525	0.82	-0.6
3,067,582	-		IAI47_14525	0.82	-0.8
3,067,582	-		IAI47_14525	0.82	+1.1
3,067,604	+				-0.2
3,067,604	+				-1.2
3,067,605	-				-0.2
3,067,605	-				+0.9
3,067,605	-				+0.5
3,067,647	+				-0.5
3,067,648	-				-0.0
3,067,653	+				-0.8
3,067,653	+				+0.8
3,067,653	+				-0.4
3,067,653	+				+1.0
3,067,654	-				-1.0
3,067,654	-				+1.3
3,067,654	-				-1.0
3,067,660	+				-1.1
3,067,660	+				+0.2
3,067,660	+				+2.3
3,067,660	+				-0.3
3,067,660	+				+0.5
3,067,660	+				-0.7
3,067,661	-				-0.2
3,067,661	-				+0.0
3,067,661	-				-2.2
3,067,661	-				+1.6
3,067,661	-				+1.7
3,067,661	-				-2.1
3,067,684	+				-1.1
3,067,685	-				+0.1
3,067,685	-				+0.2
3,067,685	-				+0.9
3,067,685	-				+2.1
3,067,690	+				+0.7
3,067,690	+				-0.0
3,067,690	+				-0.7
3,067,704	+				-0.5
3,067,705	-				-1.2
3,067,785	-		IAI47_14530	0.15	+0.0
3,067,827	+		IAI47_14530	0.20	+2.1
3,067,827	+		IAI47_14530	0.20	+0.6
3,067,828	-		IAI47_14530	0.20	+0.7
3,067,828	-		IAI47_14530	0.20	-3.3
3,067,828	-		IAI47_14530	0.20	-1.3
3,067,828	-		IAI47_14530	0.20	-0.3
3,067,828	-		IAI47_14530	0.20	-1.8
3,067,834	+		IAI47_14530	0.21	+0.7
3,067,834	+		IAI47_14530	0.21	-1.4
3,067,835	-		IAI47_14530	0.21	+0.5
3,067,835	-		IAI47_14530	0.21	+0.7
3,067,863	-		IAI47_14530	0.24	-2.6
3,067,863	-		IAI47_14530	0.24	+0.2
3,067,900	+		IAI47_14530	0.28	+0.9
3,067,900	+		IAI47_14530	0.28	-1.0
3,067,935	+		IAI47_14530	0.32	+0.3
3,067,936	-		IAI47_14530	0.32	-0.5
3,067,951	-		IAI47_14530	0.34	+1.3
3,067,951	-		IAI47_14530	0.34	-0.1
3,067,951	-		IAI47_14530	0.34	-1.3
3,067,981	+		IAI47_14530	0.37	-0.2
3,067,981	+		IAI47_14530	0.37	-1.1
3,067,982	-		IAI47_14530	0.38	+0.1
3,067,999	+		IAI47_14530	0.39	+0.5
3,067,999	+		IAI47_14530	0.39	+0.0
3,068,026	+		IAI47_14530	0.43	-1.2
3,068,026	+		IAI47_14530	0.43	-0.1
3,068,027	-		IAI47_14530	0.43	-1.5
3,068,048	+		IAI47_14530	0.45	-0.6
3,068,048	+		IAI47_14530	0.45	-1.4
3,068,049	-		IAI47_14530	0.45	-0.2
3,068,049	-		IAI47_14530	0.45	+0.2
3,068,049	-		IAI47_14530	0.45	-0.1
3,068,049	-		IAI47_14530	0.45	+1.7
3,068,049	-		IAI47_14530	0.45	-1.6
3,068,052	+		IAI47_14530	0.46	-0.5
3,068,052	+		IAI47_14530	0.46	+0.1
3,068,052	+		IAI47_14530	0.46	+0.3
3,068,052	+		IAI47_14530	0.46	+2.0
3,068,052	+		IAI47_14530	0.46	-0.8
3,068,052	+		IAI47_14530	0.46	-1.3
3,068,053	+		IAI47_14530	0.46	-0.3
3,068,134	+		IAI47_14530	0.55	+0.6
3,068,134	+		IAI47_14530	0.55	-1.5
3,068,134	+		IAI47_14530	0.55	-0.4
3,068,182	+		IAI47_14530	0.60	+1.7
3,068,356	+		IAI47_14530	0.80	+0.4
3,068,356	+		IAI47_14530	0.80	-0.2
3,068,357	-		IAI47_14530	0.80	+0.4
3,068,357	-		IAI47_14530	0.80	+1.7
3,068,390	+		IAI47_14530	0.84	+0.0
3,068,390	+		IAI47_14530	0.84	-0.3
3,068,390	+		IAI47_14530	0.84	+0.0
3,068,391	-		IAI47_14530	0.84	-0.3
3,068,425	+		IAI47_14530	0.88	-0.1
3,068,425	+		IAI47_14530	0.88	-1.4
3,068,425	+		IAI47_14530	0.88	-0.8
3,068,425	+		IAI47_14530	0.88	-0.1
3,068,425	+		IAI47_14530	0.88	-1.6
3,068,425	+		IAI47_14530	0.88	-0.8
3,068,426	-		IAI47_14530	0.88	-1.0
3,068,426	-		IAI47_14530	0.88	-2.4
3,068,441	-		IAI47_14530	0.90	-1.5
3,068,530	+				+0.0
3,068,530	+				+1.3
3,068,531	-				+1.8
3,068,531	-				-0.3
3,068,531	-				+1.7
3,068,531	-				+0.2
3,068,534	+				-0.4
3,068,534	+				-0.5
3,068,535	-				+0.2
3,068,535	-				-1.6
3,068,535	-				+1.4
3,068,542	-				-0.8
3,068,548	-				+1.0
3,068,548	-				+0.4
3,068,765	+		IAI47_14535	0.26	-0.5
3,068,766	-		IAI47_14535	0.26	+2.6
3,068,766	-		IAI47_14535	0.26	-0.9
3,068,766	-		IAI47_14535	0.26	+0.8
3,068,766	-		IAI47_14535	0.26	+1.2
3,068,831	+		IAI47_14535	0.34	+0.2
3,068,919	+		IAI47_14535	0.44	+0.8
3,068,935	+		IAI47_14535	0.46	+1.3
3,068,935	+		IAI47_14535	0.46	-0.7
3,068,935	+		IAI47_14535	0.46	-0.2
3,068,936	-		IAI47_14535	0.46	+0.6
3,068,936	-		IAI47_14535	0.46	+1.1
3,068,936	-		IAI47_14535	0.46	+0.2
3,068,936	-		IAI47_14535	0.46	-0.5
3,068,936	-		IAI47_14535	0.46	-0.1
3,069,110	+		IAI47_14535	0.67	+1.3
3,069,110	+		IAI47_14535	0.67	+0.0
3,069,121	-		IAI47_14535	0.68	+3.1
3,069,121	-		IAI47_14535	0.68	+0.5
3,069,121	-		IAI47_14535	0.68	-1.1
3,069,155	+		IAI47_14535	0.72	+3.2
3,069,214	-		IAI47_14535	0.80	-1.7
3,069,214	-		IAI47_14535	0.80	-0.4
3,069,220	+		IAI47_14535	0.80	-2.7
3,069,221	-		IAI47_14535	0.80	+0.1
3,069,221	-		IAI47_14535	0.80	+1.4
3,069,249	-		IAI47_14535	0.84	-0.1
3,069,271	+		IAI47_14535	0.86	+0.5
3,069,271	+		IAI47_14535	0.86	-0.5
3,069,291	-		IAI47_14535	0.89	+0.1
3,069,314	-				+0.4
3,069,350	-				+1.0
3,069,364	+				-0.3
3,069,364	+				-0.7
3,069,364	+				-1.2
3,069,365	-				+1.5
3,069,365	-				-2.5
3,069,375	-				+0.7
3,069,375	-				+1.1
3,069,392	+				+0.6
3,069,393	-				-1.5
3,069,438	+				-0.1
3,069,459	+		IAI47_14540	0.12	+0.1
3,069,459	+		IAI47_14540	0.12	+2.6
3,069,459	+		IAI47_14540	0.12	-0.8
3,069,459	+		IAI47_14540	0.12	-1.0
3,069,460	-		IAI47_14540	0.12	-0.2
3,069,460	-		IAI47_14540	0.12	-0.1
3,069,460	-		IAI47_14540	0.12	-0.1
3,069,460	-		IAI47_14540	0.12	+1.1
3,069,460	-		IAI47_14540	0.12	-0.8
3,069,467	+		IAI47_14540	0.13	+0.9
3,069,467	+		IAI47_14540	0.13	+1.7
3,069,468	-		IAI47_14540	0.13	+1.2
3,069,468	-		IAI47_14540	0.13	+0.5
3,069,538	+		IAI47_14540	0.23	-0.4
3,069,538	+		IAI47_14540	0.23	+1.5
3,069,550	+		IAI47_14540	0.25	+0.8
3,069,550	+		IAI47_14540	0.25	+1.3
3,069,550	+		IAI47_14540	0.25	+3.0
3,069,550	+		IAI47_14540	0.25	-1.8
3,069,550	+		IAI47_14540	0.25	-0.6
3,069,550	+		IAI47_14540	0.25	-1.4
3,069,551	-		IAI47_14540	0.25	-0.2
3,069,551	-		IAI47_14540	0.25	+1.8
3,069,551	-		IAI47_14540	0.25	-1.3
3,069,551	-		IAI47_14540	0.25	+1.7
3,069,556	+		IAI47_14540	0.26	-1.0
3,069,556	+		IAI47_14540	0.26	+0.0
3,069,557	-		IAI47_14540	0.26	+0.2
3,069,557	-		IAI47_14540	0.26	-0.5
3,069,567	+		IAI47_14540	0.28	-0.2
3,069,567	+		IAI47_14540	0.28	-0.3
3,069,567	+		IAI47_14540	0.28	+0.4
3,069,568	-		IAI47_14540	0.28	+0.7
3,069,568	-		IAI47_14540	0.28	-1.5
3,069,568	-		IAI47_14540	0.28	+0.4
3,069,568	-		IAI47_14540	0.28	+0.6
3,069,579	+		IAI47_14540	0.29	+2.2
3,069,579	+		IAI47_14540	0.29	-0.6
3,069,686	+		IAI47_14540	0.45	+0.7
3,069,687	-		IAI47_14540	0.46	-0.2
3,069,799	+		IAI47_14540	0.62	-0.3
3,069,799	+		IAI47_14540	0.62	+2.4
3,069,799	+		IAI47_14540	0.62	-1.4
3,069,831	+		IAI47_14540	0.67	-0.8
3,069,832	-		IAI47_14540	0.67	-0.7
3,069,832	-		IAI47_14540	0.67	-0.9
3,069,832	-		IAI47_14540	0.67	-0.1
3,069,832	-		IAI47_14540	0.67	+1.3
3,069,889	+		IAI47_14540	0.76	+0.6
3,070,068	+				-0.9
3,070,122	+				-1.2
3,070,122	+				-0.8
3,070,122	+				+0.5
3,070,122	+				-0.2
3,070,122	+				+0.9
3,070,122	+				+0.9
3,070,123	-				-0.1
3,070,123	-				+1.5
3,070,123	-				+0.6
3,070,123	-				-0.4
3,070,123	-				-0.6
3,070,130	+				-0.1
3,070,130	+				-0.9
3,070,130	+				+0.1
3,070,130	+				-0.6
3,070,130	+				+0.5
3,070,130	+				+0.2
3,070,130	+				+0.2
3,070,130	+				+0.7
3,070,130	+				+0.6
3,070,130	+				+1.2
3,070,130	+				-2.0
3,070,130	+				+0.4
3,070,130	+				+1.6
3,070,130	+				-1.5
3,070,130	+				-0.4
3,070,131	-				-0.9
3,070,131	-				+1.5
3,070,131	-				+1.9
3,070,131	-				-1.8
3,070,131	-				-0.3
3,070,131	-				-1.2
3,070,131	-				-1.1
3,070,131	-				+0.9
3,070,131	-				-0.1
3,070,131	-				-2.3
3,070,131	-				+0.0
3,070,134	+				-0.6
3,070,134	+				+2.7
3,070,134	+				-1.9
3,070,134	+				+0.2
3,070,134	+				-0.2
3,070,134	+				+1.2
3,070,134	+				-0.5
3,070,135	-				-0.5
3,070,135	-				-2.1
3,070,135	-				+0.9
3,070,135	-				+0.0
3,070,135	-				-0.5
3,070,135	-				-0.8
3,070,135	-				-0.2
3,070,135	-				+2.5
3,070,164	-				-0.8
3,070,176	-				-1.5
3,070,181	+				+0.5
3,070,185	-				-1.9
3,070,186	+				-0.6
3,070,186	+				-1.8
3,070,186	+				-0.5
3,070,186	+				-2.5
3,070,208	+				+1.1
3,070,208	+				-0.5
3,070,209	-				-1.7
3,070,209	-				+0.9
3,070,209	-				-1.6
3,070,209	-				+0.1
3,070,222	+				-0.5
3,070,222	+				+0.4
3,070,232	+				+0.1
3,070,232	+				-0.5
3,070,233	-				-1.7
3,070,236	+				+0.4
3,070,236	+				-0.3
3,070,237	-				+0.2
3,070,237	-				+0.0
3,070,237	-				+1.8
3,070,359	+				+0.6
3,070,359	+				+0.7
3,070,359	+				-0.0
3,070,360	-				-0.8
3,070,360	-				-0.8
3,070,365	+				-0.7
3,070,365	+				-0.0
3,070,366	-				+0.0
3,070,375	+				-0.4
3,070,376	-				-2.2
3,070,378	-				-1.3