Strain Fitness in Pantoea sp. MT58 around IAI47_11690

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,477,550	-		IAI47_11685	0.22	-1.1
2,477,550	-		IAI47_11685	0.22	-0.1
2,477,618	+		IAI47_11685	0.27	-0.7
2,477,618	+		IAI47_11685	0.27	+0.2
2,477,618	+		IAI47_11685	0.27	-0.0
2,477,618	+		IAI47_11685	0.27	-1.1
2,477,618	+		IAI47_11685	0.27	-1.2
2,477,619	-		IAI47_11685	0.27	-2.7
2,477,619	-		IAI47_11685	0.27	-2.2
2,477,619	-		IAI47_11685	0.27	-0.6
2,477,677	+		IAI47_11685	0.32	-1.1
2,477,677	+		IAI47_11685	0.32	-1.2
2,477,677	+		IAI47_11685	0.32	-0.6
2,477,678	-		IAI47_11685	0.32	-1.3
2,477,678	-		IAI47_11685	0.32	-1.0
2,477,683	-		IAI47_11685	0.32	-0.8
2,477,701	+		IAI47_11685	0.34	+0.9
2,477,701	+		IAI47_11685	0.34	-0.6
2,477,701	+		IAI47_11685	0.34	-0.2
2,477,813	+		IAI47_11685	0.43	-0.9
2,477,813	+		IAI47_11685	0.43	-1.1
2,477,814	-		IAI47_11685	0.43	-0.4
2,477,814	-		IAI47_11685	0.43	-1.3
2,477,814	-		IAI47_11685	0.43	-1.1
2,477,840	+		IAI47_11685	0.45	-0.3
2,477,841	-		IAI47_11685	0.45	-0.9
2,477,841	-		IAI47_11685	0.45	-0.1
2,477,841	-		IAI47_11685	0.45	-2.3
2,477,841	-		IAI47_11685	0.45	-1.1
2,477,868	+		IAI47_11685	0.47	+1.1
2,477,870	+		IAI47_11685	0.47	-3.5
2,477,870	+		IAI47_11685	0.47	-0.8
2,477,870	+		IAI47_11685	0.47	-1.7
2,477,870	+		IAI47_11685	0.47	-2.2
2,477,870	+		IAI47_11685	0.47	-0.7
2,477,870	+		IAI47_11685	0.47	-1.5
2,477,871	-		IAI47_11685	0.47	-2.5
2,477,871	-		IAI47_11685	0.47	-1.3
2,477,871	-		IAI47_11685	0.47	+0.2
2,477,871	-		IAI47_11685	0.47	-3.8
2,477,871	-		IAI47_11685	0.47	-0.2
2,477,987	+		IAI47_11685	0.57	-1.4
2,478,104	+		IAI47_11685	0.66	-0.6
2,478,104	+		IAI47_11685	0.66	-1.6
2,478,104	+		IAI47_11685	0.66	-1.8
2,478,105	-		IAI47_11685	0.66	-3.2
2,478,105	-		IAI47_11685	0.66	-4.3
2,478,105	-		IAI47_11685	0.66	-0.8
2,478,160	+		IAI47_11685	0.71	+0.1
2,478,160	+		IAI47_11685	0.71	-0.6
2,478,160	+		IAI47_11685	0.71	-0.3
2,478,212	-		IAI47_11685	0.75	-1.3
2,478,445	-				-0.2
2,478,532	+				+0.2
2,478,538	+				-2.8
2,478,541	+				-0.5
2,478,542	-				-0.9
2,478,642	+				-3.0
2,478,642	+				-1.3
2,478,643	-				-0.7
2,478,643	-				+0.1
2,478,643	-				+0.2
2,478,656	+				+1.3
2,478,657	-				-1.3
2,478,657	-				+1.6
2,478,670	+				+1.2
2,478,670	+				-0.5
2,478,670	+				-0.4
2,478,671	-				-0.5
2,478,671	-				-0.0
2,478,677	-		IAI47_11690	0.10	+0.4
2,478,810	+		IAI47_11690	0.20	-0.4
2,478,837	+		IAI47_11690	0.22	-1.1
2,478,838	-		IAI47_11690	0.22	-1.0
2,478,883	-		IAI47_11690	0.26	-2.7
2,478,989	+		IAI47_11690	0.33	+0.7
2,478,990	-		IAI47_11690	0.34	-2.2
2,478,990	-		IAI47_11690	0.34	-1.3
2,479,018	+		IAI47_11690	0.36	-2.5
2,479,019	-		IAI47_11690	0.36	-1.4
2,479,091	+		IAI47_11690	0.41	+1.3
2,479,092	-		IAI47_11690	0.41	-0.3
2,479,094	-		IAI47_11690	0.41	-2.2
2,479,094	-		IAI47_11690	0.41	-1.6
2,479,094	-		IAI47_11690	0.41	-0.5
2,479,094	-		IAI47_11690	0.41	+0.4
2,479,175	+		IAI47_11690	0.47	+1.7
2,479,176	-		IAI47_11690	0.47	-2.5
2,479,187	+		IAI47_11690	0.48	-0.5
2,479,187	+		IAI47_11690	0.48	-0.8
2,479,188	-		IAI47_11690	0.48	-1.8
2,479,188	-		IAI47_11690	0.48	-1.7
2,479,271	+		IAI47_11690	0.55	-0.7
2,479,272	-		IAI47_11690	0.55	+0.2
2,479,272	-		IAI47_11690	0.55	-1.3
2,479,324	+		IAI47_11690	0.58	+2.4
2,479,325	-		IAI47_11690	0.59	-1.7
2,479,325	-		IAI47_11690	0.59	-0.6
2,479,325	-		IAI47_11690	0.59	+0.1
2,479,511	-		IAI47_11690	0.72	-2.3
2,479,511	-		IAI47_11690	0.72	+0.3
2,479,511	-		IAI47_11690	0.72	+0.6
2,479,744	+		IAI47_11690	0.90	+0.1
2,479,744	+		IAI47_11690	0.90	-0.4
2,479,745	-		IAI47_11690	0.90	-1.4
2,479,757	+				+0.9
2,479,757	+				+0.3
2,479,758	-				-2.1
2,479,758	-				+0.2
2,479,758	-				-1.8
2,479,758	-				-1.1
2,479,758	-				-1.8
2,479,758	-				-1.8
2,479,758	-				-1.3
2,479,758	-				-3.2
2,479,758	-				-0.5
2,479,758	-				-2.8
2,479,758	-				-0.6
2,479,759	+				+1.4
2,479,759	+				-0.3
2,479,759	+				+0.7
2,479,760	-				-0.2
2,479,760	-				-0.1
2,479,804	+				+1.9
2,479,880	+				+0.9
2,479,880	+				+0.3
2,479,880	+				+2.8
2,479,880	+				-1.3
2,479,880	+				+0.3
2,479,881	-				+1.8
2,479,881	-				-2.4
2,479,881	-				-0.4
2,479,881	-				-0.1
2,479,881	-				-2.8
2,479,881	-				-1.5
2,479,912	+				-1.0
2,479,912	+				-1.3
2,479,951	+		IAI47_11695	0.13	+1.7
2,479,951	+		IAI47_11695	0.13	+1.8
2,479,952	-		IAI47_11695	0.13	-3.0
2,479,952	-		IAI47_11695	0.13	-1.3
2,480,153	+		IAI47_11695	0.54	+0.2
2,480,153	+		IAI47_11695	0.54	-1.3
2,480,219	+		IAI47_11695	0.67	-1.6
2,480,286	+		IAI47_11695	0.81	-0.0
2,480,286	+		IAI47_11695	0.81	+1.0
2,480,286	+		IAI47_11695	0.81	-1.8
2,480,286	+		IAI47_11695	0.81	-0.3
2,480,286	+		IAI47_11695	0.81	+1.1
2,480,287	-		IAI47_11695	0.81	-0.1
2,480,287	-		IAI47_11695	0.81	+0.1
2,480,287	-		IAI47_11695	0.81	-2.3
2,480,287	-		IAI47_11695	0.81	-1.0
2,480,287	-		IAI47_11695	0.81	-0.0
2,480,287	-		IAI47_11695	0.81	-0.8
2,480,287	-		IAI47_11695	0.81	+0.4
2,480,289	+		IAI47_11695	0.81	+1.3
2,480,289	+		IAI47_11695	0.81	+0.9
2,480,290	-		IAI47_11695	0.82	-0.9
2,480,290	-		IAI47_11695	0.82	-1.0
2,480,290	-		IAI47_11695	0.82	-0.1
2,480,305	+		IAI47_11695	0.85	+0.3
2,480,314	+		IAI47_11695	0.86	+1.7
2,480,314	+		IAI47_11695	0.86	-0.2
2,480,315	-		IAI47_11695	0.87	-0.0
2,480,315	-		IAI47_11695	0.87	-0.1
2,480,345	+				-0.4
2,480,346	-				+0.0
2,480,346	-				+0.4
2,480,346	-				-3.0
2,480,405	+				+1.0
2,480,405	+				-0.1
2,480,406	-				-0.4
2,480,406	-				+1.5
2,480,409	+				+1.1
2,480,409	+				+0.2
2,480,410	-				+2.4
2,480,410	-				-1.0
2,480,490	+		IAI47_11700	0.14	+0.3
2,480,508	+		IAI47_11700	0.17	+0.0
2,480,509	-		IAI47_11700	0.18	+0.9
2,480,509	-		IAI47_11700	0.18	+0.3
2,480,523	+		IAI47_11700	0.20	-0.9
2,480,523	+		IAI47_11700	0.20	-0.9
2,480,524	-		IAI47_11700	0.20	+1.0
2,480,524	-		IAI47_11700	0.20	+0.5
2,480,524	-		IAI47_11700	0.20	-0.1
2,480,524	-		IAI47_11700	0.20	+0.8
2,480,524	-		IAI47_11700	0.20	+0.5
2,480,537	+		IAI47_11700	0.22	+0.7
2,480,538	-		IAI47_11700	0.22	-0.6
2,480,538	-		IAI47_11700	0.22	+0.6
2,480,573	+		IAI47_11700	0.28	+0.0
2,480,573	+		IAI47_11700	0.28	+1.6
2,480,586	+		IAI47_11700	0.30	-0.9
2,480,586	+		IAI47_11700	0.30	+2.1
2,480,587	-		IAI47_11700	0.31	+1.0
2,480,587	-		IAI47_11700	0.31	-1.6
2,480,587	-		IAI47_11700	0.31	+1.6
2,480,587	-		IAI47_11700	0.31	+0.9
2,480,587	-		IAI47_11700	0.31	+1.1
2,480,719	-		IAI47_11700	0.53	-0.4
2,480,721	-		IAI47_11700	0.53	+0.6
2,480,721	-		IAI47_11700	0.53	+0.3
2,480,762	+		IAI47_11700	0.60	+1.8
2,480,762	+		IAI47_11700	0.60	+1.0
2,480,763	-		IAI47_11700	0.60	-0.2
2,480,792	+		IAI47_11700	0.65	-0.8
2,480,792	+		IAI47_11700	0.65	-0.2
2,480,793	-		IAI47_11700	0.65	+1.1
2,480,842	+		IAI47_11700	0.73	+0.4
2,480,850	-		IAI47_11700	0.75	+1.6
2,480,866	+		IAI47_11700	0.77	-0.3
2,480,867	-		IAI47_11700	0.78	+0.1