Strain Fitness in Pantoea sp. MT58 around IAI47_09055

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,909,504	+				+0.0
1,909,505	-				+1.4
1,909,541	+				-0.5
1,909,567	+				-0.2
1,909,567	+				+0.3
1,909,572	-				-0.6
1,909,614	+				-0.7
1,909,625	+				+0.8
1,909,625	+				+0.3
1,909,626	-				+1.4
1,909,626	-				-0.2
1,909,658	+				+0.3
1,909,672	-				+0.6
1,909,672	-				-0.3
1,909,693	-				-0.2
1,909,693	-				-1.4
1,909,693	-				-1.0
1,909,699	+				+0.6
1,909,700	-				-1.3
1,909,721	+				+0.4
1,909,722	-				+0.5
1,909,722	-				-0.7
1,909,722	-				-1.1
1,909,722	-				-0.1
1,909,741	-				+1.1
1,909,743	+				+0.0
1,909,743	+				+1.3
1,909,743	+				+0.1
1,909,743	+				+0.2
1,909,743	+				+0.6
1,909,744	-				-0.8
1,909,776	+				+1.0
1,909,776	+				+1.9
1,909,777	-				-1.1
1,909,777	-				+0.3
1,909,784	+				-2.8
1,909,784	+				+0.1
1,909,785	-				-1.6
1,909,785	-				+2.0
1,909,797	+				-0.1
1,909,797	+				+0.7
1,909,797	+				-0.5
1,909,798	-				+0.3
1,909,803	+				+0.4
1,909,804	-				+1.2
1,909,806	+				-0.3
1,909,807	-				+1.6
1,909,807	-				+0.3
1,909,855	-		IAI47_09050	0.11	+0.3
1,909,855	-		IAI47_09050	0.11	+1.3
1,909,855	-		IAI47_09050	0.11	-1.3
1,909,856	+		IAI47_09050	0.11	-0.3
1,909,856	+		IAI47_09050	0.11	-0.5
1,909,857	-		IAI47_09050	0.12	-0.7
1,909,857	-		IAI47_09050	0.12	-0.1
1,909,857	-		IAI47_09050	0.12	-1.1
1,909,857	-		IAI47_09050	0.12	+0.2
1,909,857	-		IAI47_09050	0.12	-1.2
1,909,857	-		IAI47_09050	0.12	-1.3
1,909,857	-		IAI47_09050	0.12	-1.5
1,909,857	-		IAI47_09050	0.12	+0.2
1,909,860	+		IAI47_09050	0.12	-1.7
1,909,860	+		IAI47_09050	0.12	-1.3
1,909,860	+		IAI47_09050	0.12	+0.9
1,909,860	+		IAI47_09050	0.12	+0.8
1,909,861	-		IAI47_09050	0.12	+0.5
1,909,861	-		IAI47_09050	0.12	+0.1
1,909,890	+		IAI47_09050	0.17	+0.6
1,909,968	+		IAI47_09050	0.29	-0.7
1,909,968	+		IAI47_09050	0.29	-0.9
1,909,968	+		IAI47_09050	0.29	-0.4
1,909,969	-		IAI47_09050	0.30	-1.4
1,909,989	+		IAI47_09050	0.33	-0.3
1,910,024	+		IAI47_09050	0.38	-0.6
1,910,024	+		IAI47_09050	0.38	-1.6
1,910,025	-		IAI47_09050	0.39	+0.7
1,910,025	-		IAI47_09050	0.39	+0.1
1,910,038	+		IAI47_09050	0.41	+0.0
1,910,039	-		IAI47_09050	0.41	+0.4
1,910,039	-		IAI47_09050	0.41	-1.0
1,910,124	+		IAI47_09050	0.55	-0.5
1,910,125	-		IAI47_09050	0.55	-1.7
1,910,156	-		IAI47_09050	0.60	-0.2
1,910,172	+		IAI47_09050	0.62	-0.3
1,910,172	+		IAI47_09050	0.62	+0.5
1,910,193	-		IAI47_09050	0.66	+0.0
1,910,193	-		IAI47_09050	0.66	-1.8
1,910,207	+		IAI47_09050	0.68	+0.9
1,910,208	-		IAI47_09050	0.68	+3.6
1,910,213	+		IAI47_09050	0.69	-0.5
1,910,213	+		IAI47_09050	0.69	-0.6
1,910,214	-		IAI47_09050	0.69	+0.0
1,910,214	-		IAI47_09050	0.69	-0.1
1,910,214	-		IAI47_09050	0.69	-1.2
1,910,258	+		IAI47_09050	0.76	+0.4
1,910,267	+		IAI47_09050	0.78	-1.2
1,910,268	-		IAI47_09050	0.78	+0.0
1,910,268	-		IAI47_09050	0.78	+1.0
1,910,316	+		IAI47_09050	0.86	+1.0
1,910,316	+		IAI47_09050	0.86	+0.1
1,910,316	+		IAI47_09050	0.86	-1.0
1,910,316	+		IAI47_09050	0.86	+0.3
1,910,316	+		IAI47_09050	0.86	+0.6
1,910,317	-		IAI47_09050	0.86	+0.0
1,910,317	-		IAI47_09050	0.86	-0.7
1,910,318	+		IAI47_09050	0.86	+0.9
1,910,318	+		IAI47_09050	0.86	+0.5
1,910,318	+		IAI47_09050	0.86	+1.3
1,910,333	+		IAI47_09050	0.88	+1.7
1,910,333	+		IAI47_09050	0.88	-1.1
1,910,334	-		IAI47_09050	0.88	+1.1
1,910,334	-		IAI47_09050	0.88	-1.1
1,910,340	+		IAI47_09050	0.89	-1.0
1,910,340	+		IAI47_09050	0.89	-0.2
1,910,340	+		IAI47_09050	0.89	-0.8
1,910,341	-		IAI47_09050	0.90	-0.4
1,910,342	+		IAI47_09050	0.90	-0.4
1,910,343	-		IAI47_09050	0.90	-0.3
1,910,343	-		IAI47_09050	0.90	+1.1
1,910,353	+				+2.4
1,910,353	+				-1.0
1,910,353	+				-0.5
1,910,419	+				+0.1
1,910,422	+				-0.4
1,910,472	-				-1.0
1,910,493	+				+0.6
1,910,494	-				-2.2
1,910,494	-				+1.3
1,910,573	+				+0.2
1,910,573	+				-2.4
1,910,573	+				-3.3
1,910,573	+				-0.7
1,910,574	-				-1.2
1,910,589	+				-1.5
1,910,589	+				-0.9
1,910,589	+				-1.1
1,910,590	-				-1.1
1,910,746	-		IAI47_09055	0.10	-1.0
1,910,816	-		IAI47_09055	0.13	-1.7
1,910,816	-		IAI47_09055	0.13	-0.4
1,910,864	+		IAI47_09055	0.15	-1.3
1,910,865	-		IAI47_09055	0.15	+1.3
1,910,865	-		IAI47_09055	0.15	-1.5
1,910,909	+		IAI47_09055	0.16	-2.1
1,910,930	-		IAI47_09055	0.17	-2.0
1,910,930	-		IAI47_09055	0.17	-1.2
1,911,036	+		IAI47_09055	0.21	-1.2
1,911,037	-		IAI47_09055	0.21	-0.7
1,911,039	+		IAI47_09055	0.21	-1.0
1,911,039	+		IAI47_09055	0.21	-0.7
1,911,039	+		IAI47_09055	0.21	-1.6
1,911,040	-		IAI47_09055	0.21	-1.9
1,911,040	-		IAI47_09055	0.21	+0.1
1,911,040	-		IAI47_09055	0.21	-0.2
1,911,040	-		IAI47_09055	0.21	-1.6
1,911,092	+		IAI47_09055	0.23	-0.7
1,911,093	-		IAI47_09055	0.23	-2.1
1,911,153	-		IAI47_09055	0.25	-0.1
1,911,176	+		IAI47_09055	0.26	-2.0
1,911,176	+		IAI47_09055	0.26	-2.2
1,911,177	-		IAI47_09055	0.26	-0.9
1,911,237	+		IAI47_09055	0.28	-1.5
1,911,238	-		IAI47_09055	0.28	-1.0
1,911,238	-		IAI47_09055	0.28	-0.7
1,911,253	-		IAI47_09055	0.29	-1.7
1,911,287	+		IAI47_09055	0.30	-2.1
1,911,287	+		IAI47_09055	0.30	-0.5
1,911,288	-		IAI47_09055	0.30	-0.4
1,911,303	-		IAI47_09055	0.31	-2.4
1,911,398	-		IAI47_09055	0.34	-0.9
1,911,423	+		IAI47_09055	0.35	-2.1
1,911,429	+		IAI47_09055	0.36	+0.9
1,911,448	+		IAI47_09055	0.36	-0.7
1,911,485	+		IAI47_09055	0.38	-2.0
1,911,485	+		IAI47_09055	0.38	-1.9
1,911,486	-		IAI47_09055	0.38	+0.3
1,911,486	-		IAI47_09055	0.38	-2.6
1,911,486	-		IAI47_09055	0.38	-1.9
1,911,486	-		IAI47_09055	0.38	-1.9
1,911,582	+		IAI47_09055	0.41	-0.9
1,911,583	-		IAI47_09055	0.41	-2.0
1,911,583	-		IAI47_09055	0.41	-1.5
1,911,711	+		IAI47_09055	0.46	-1.2
1,911,712	-		IAI47_09055	0.46	+0.9
1,911,757	-		IAI47_09055	0.48	-0.7
1,911,780	-		IAI47_09055	0.49	-0.7
1,911,780	-		IAI47_09055	0.49	-0.7
1,911,790	-		IAI47_09055	0.49	-2.0
1,911,810	+		IAI47_09055	0.50	-1.7
1,911,810	+		IAI47_09055	0.50	-1.5
1,911,810	+		IAI47_09055	0.50	-2.8
1,911,810	+		IAI47_09055	0.50	-0.5
1,911,810	+		IAI47_09055	0.50	-1.4
1,911,811	-		IAI47_09055	0.50	-4.1
1,911,811	-		IAI47_09055	0.50	-1.0
1,911,811	-		IAI47_09055	0.50	-0.8
1,911,811	-		IAI47_09055	0.50	-1.3
1,911,811	-		IAI47_09055	0.50	+0.6
1,911,841	-		IAI47_09055	0.51	+0.1
1,911,843	+		IAI47_09055	0.51	-0.6
1,911,844	-		IAI47_09055	0.51	-0.5
1,911,844	-		IAI47_09055	0.51	-0.9
1,911,844	-		IAI47_09055	0.51	-1.5
1,911,844	-		IAI47_09055	0.51	-0.3
1,911,877	-		IAI47_09055	0.52	-0.0
1,911,877	-		IAI47_09055	0.52	-0.9
1,911,877	-		IAI47_09055	0.52	-0.4
1,911,882	+		IAI47_09055	0.52	-1.8
1,911,936	-		IAI47_09055	0.54	-1.8
1,911,936	-		IAI47_09055	0.54	-1.9
1,911,936	-		IAI47_09055	0.54	-0.2
1,912,011	-		IAI47_09055	0.57	-1.0
1,912,011	-		IAI47_09055	0.57	+0.5
1,912,045	-		IAI47_09055	0.58	-1.1
1,912,047	-		IAI47_09055	0.59	-2.4
1,912,098	+		IAI47_09055	0.60	+0.9
1,912,099	-		IAI47_09055	0.60	-0.8
1,912,130	+		IAI47_09055	0.62	-2.8
1,912,130	+		IAI47_09055	0.62	-1.5
1,912,131	-		IAI47_09055	0.62	-0.9
1,912,254	+		IAI47_09055	0.66	-1.7
1,912,308	+		IAI47_09055	0.68	-1.3
1,912,309	-		IAI47_09055	0.68	-0.5
1,912,309	-		IAI47_09055	0.68	+0.7
1,912,346	+		IAI47_09055	0.70	-2.0
1,912,346	+		IAI47_09055	0.70	-0.5
1,912,346	+		IAI47_09055	0.70	+1.5
1,912,347	-		IAI47_09055	0.70	-0.1
1,912,347	-		IAI47_09055	0.70	-1.4
1,912,347	-		IAI47_09055	0.70	+0.0
1,912,347	-		IAI47_09055	0.70	-2.9
1,912,386	-		IAI47_09055	0.71	-1.7
1,912,437	+		IAI47_09055	0.73	-1.6
1,912,438	-		IAI47_09055	0.73	-0.7
1,912,512	+		IAI47_09055	0.76	-2.1
1,912,513	-		IAI47_09055	0.76	-1.9
1,912,708	-		IAI47_09055	0.83	-2.1
1,912,708	-		IAI47_09055	0.83	-3.3
1,912,708	-		IAI47_09055	0.83	-1.1
1,912,720	-		IAI47_09055	0.84	-1.1
1,912,787	-		IAI47_09055	0.86	+0.0
1,912,818	+		IAI47_09055	0.87	-1.9
1,912,819	-		IAI47_09055	0.87	-1.7
1,912,819	-		IAI47_09055	0.87	-1.4
1,912,819	-		IAI47_09055	0.87	-1.1
1,912,819	-		IAI47_09055	0.87	-3.2
1,912,819	-		IAI47_09055	0.87	-0.9
1,912,819	-		IAI47_09055	0.87	-0.7
1,912,881	+		IAI47_09055	0.90	-2.0
1,912,881	+		IAI47_09055	0.90	-1.9
1,912,881	+		IAI47_09055	0.90	+0.5
1,912,882	-		IAI47_09055	0.90	-2.2
1,912,895	-				-1.3
1,912,920	+				-1.4
1,912,920	+				-1.6
1,912,920	+				-1.7
1,912,921	-				-2.1
1,912,921	-				-1.6
1,912,922	+				-2.8
1,912,922	+				-0.7
1,912,931	+				-3.0
1,912,931	+				-2.3
1,912,931	+				-1.4
1,912,931	+				-1.6
1,912,932	-				-1.2
1,912,932	-				-2.1
1,912,932	-				-2.1
1,912,932	-				-0.9
1,912,935	+				+0.7
1,912,935	+				-1.4
1,912,935	+				-0.5
1,912,936	-				+0.9
1,912,936	-				-0.6
1,912,936	-				-0.6
1,912,936	-				+1.1
1,913,010	+				+0.5
1,913,010	+				-1.3
1,913,010	+				-2.9
1,913,010	+				-2.8
1,913,011	-				-1.2
1,913,011	-				-0.7
1,913,011	-				-0.9
1,913,060	-				-1.3
1,913,182	-				+1.8
1,913,221	+				-1.7
1,913,281	+				-0.4
1,913,344	-				+0.5
1,913,361	-				+0.6
1,913,361	-				-0.9
1,913,386	+				-0.3
1,913,427	-				+0.1
1,913,475	+				-1.2
1,913,476	-				-0.5
1,913,492	+				+0.4
1,913,504	+				+0.4
1,913,532	+				+1.5
1,913,533	-				+0.6
1,913,533	-				-0.3
1,913,533	-				-0.4
1,913,533	-				+2.1
1,913,535	-				-1.5
1,913,535	-				+0.1
1,913,536	+				-1.1
1,913,536	+				+0.1
1,913,536	+				+0.6
1,913,536	+				-0.3
1,913,536	+				+1.7
1,913,536	+				-0.5
1,913,536	+				-1.0
1,913,537	-				+1.1
1,913,537	-				-0.5
1,913,537	-				+0.9
1,913,537	-				+0.8
1,913,537	-				+0.3
1,913,537	-				-0.5
1,913,537	-				+1.1
1,913,537	-				+2.7
1,913,540	+				+0.2
1,913,540	+				+0.5
1,913,540	+				+1.7
1,913,540	+				-0.2
1,913,540	+				-1.1
1,913,541	-				+1.9
1,913,541	-				+0.8
1,913,541	-				+0.1
1,913,561	+				-0.8
1,913,579	+				-0.4
1,913,579	+				-0.4
1,913,579	+				-0.8
1,913,579	+				-1.5
1,913,580	-				-0.8
1,913,580	-				-0.4
1,913,580	-				-1.0
1,913,580	-				+1.5
1,913,580	-				+1.0
1,913,584	+				-0.3
1,913,584	+				-0.2
1,913,584	+				+0.1
1,913,584	+				-0.2
1,913,585	-				+2.9
1,913,585	-				+1.3
1,913,607	-				-1.1
1,913,615	-				+0.0
1,913,615	-				-0.1
1,913,615	-				+1.0
1,913,637	+				-0.5
1,913,637	+				+0.9
1,913,638	-				+0.7
1,913,638	-				+0.0
1,913,638	-				+0.8
1,913,643	+				+0.7
1,913,651	+				+0.0
1,913,652	-				-1.3
1,913,652	-				+2.8
1,913,653	+				-2.7
1,913,653	+				-1.4
1,913,654	-				-1.8
1,913,654	-				-0.4
1,913,701	+		IAI47_09060	0.12	-1.4
1,913,701	+		IAI47_09060	0.12	-1.5
1,913,702	-		IAI47_09060	0.12	-0.4
1,913,702	-		IAI47_09060	0.12	-0.5
1,913,702	-		IAI47_09060	0.12	-1.3
1,913,702	-		IAI47_09060	0.12	-0.1
1,913,702	-		IAI47_09060	0.12	+0.6
1,913,729	+		IAI47_09060	0.17	+0.8
1,913,752	+		IAI47_09060	0.20	-1.7
1,913,752	+		IAI47_09060	0.20	-0.4
1,913,753	-		IAI47_09060	0.20	-0.1
1,913,753	-		IAI47_09060	0.20	+0.1
1,913,758	+		IAI47_09060	0.21	-2.2
1,913,758	+		IAI47_09060	0.21	+0.3
1,913,758	+		IAI47_09060	0.21	-0.2
1,913,758	+		IAI47_09060	0.21	+0.1
1,913,759	-		IAI47_09060	0.21	+0.2
1,913,759	-		IAI47_09060	0.21	-0.3
1,913,759	-		IAI47_09060	0.21	-0.2
1,913,765	-		IAI47_09060	0.22	+2.7
1,913,770	+		IAI47_09060	0.23	+1.0
1,913,927	-		IAI47_09060	0.47	+2.2
1,914,019	+		IAI47_09060	0.61	+0.4
1,914,019	+		IAI47_09060	0.61	+0.7
1,914,019	+		IAI47_09060	0.61	+1.1
1,914,019	+		IAI47_09060	0.61	-1.8
1,914,020	-		IAI47_09060	0.62	-0.2
1,914,020	-		IAI47_09060	0.62	+0.7
1,914,050	+		IAI47_09060	0.66	+0.9
1,914,051	-		IAI47_09060	0.66	-1.1
1,914,080	-		IAI47_09060	0.71	-1.6
1,914,094	+		IAI47_09060	0.73	+1.7
1,914,095	-		IAI47_09060	0.73	-0.1
1,914,095	-		IAI47_09060	0.73	-0.1
1,914,095	-		IAI47_09060	0.73	+0.7
1,914,095	-		IAI47_09060	0.73	-0.1
1,914,095	-		IAI47_09060	0.73	+0.9
1,914,117	+		IAI47_09060	0.77	+0.7
1,914,117	+		IAI47_09060	0.77	-1.4
1,914,138	+		IAI47_09060	0.80	+1.0
1,914,139	-		IAI47_09060	0.80	-0.1