Strain Fitness in Pantoea sp. MT58 around IAI47_06850

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,430,250	+		IAI47_06845	0.43	+0.3
1,430,251	-		IAI47_06845	0.43	-0.2
1,430,251	-		IAI47_06845	0.43	+1.0
1,430,251	-		IAI47_06845	0.43	+1.0
1,430,252	+		IAI47_06845	0.43	-1.5
1,430,252	+		IAI47_06845	0.43	-1.6
1,430,252	+		IAI47_06845	0.43	+0.9
1,430,252	+		IAI47_06845	0.43	+0.0
1,430,252	+		IAI47_06845	0.43	+0.6
1,430,252	+		IAI47_06845	0.43	-0.7
1,430,252	+		IAI47_06845	0.43	+0.1
1,430,252	+		IAI47_06845	0.43	+0.0
1,430,252	+		IAI47_06845	0.43	+0.3
1,430,252	+		IAI47_06845	0.43	-0.5
1,430,252	+		IAI47_06845	0.43	-0.2
1,430,252	+		IAI47_06845	0.43	-0.5
1,430,252	+		IAI47_06845	0.43	-2.7
1,430,252	+		IAI47_06845	0.43	-0.5
1,430,253	-		IAI47_06845	0.43	+1.7
1,430,253	-		IAI47_06845	0.43	-3.0
1,430,253	-		IAI47_06845	0.43	-1.2
1,430,253	-		IAI47_06845	0.43	-0.1
1,430,253	-		IAI47_06845	0.43	-1.0
1,430,253	-		IAI47_06845	0.43	-2.6
1,430,253	-		IAI47_06845	0.43	+0.2
1,430,253	-		IAI47_06845	0.43	+0.2
1,430,253	-		IAI47_06845	0.43	-2.2
1,430,253	-		IAI47_06845	0.43	-0.5
1,430,253	-		IAI47_06845	0.43	-1.1
1,430,253	-		IAI47_06845	0.43	-0.3
1,430,253	-		IAI47_06845	0.43	+0.2
1,430,253	-		IAI47_06845	0.43	+1.7
1,430,331	+		IAI47_06845	0.49	-1.0
1,430,332	-		IAI47_06845	0.49	+1.4
1,430,397	+		IAI47_06845	0.54	-0.4
1,430,397	+		IAI47_06845	0.54	+0.1
1,430,398	-		IAI47_06845	0.54	-0.3
1,430,433	+		IAI47_06845	0.56	-1.8
1,430,433	+		IAI47_06845	0.56	+2.1
1,430,433	+		IAI47_06845	0.56	-1.4
1,430,434	-		IAI47_06845	0.56	+1.0
1,430,434	-		IAI47_06845	0.56	+0.4
1,430,434	-		IAI47_06845	0.56	+0.1
1,430,434	-		IAI47_06845	0.56	-1.0
1,430,434	-		IAI47_06845	0.56	-0.8
1,430,436	-		IAI47_06845	0.57	-0.0
1,430,490	+		IAI47_06845	0.60	-0.5
1,430,490	+		IAI47_06845	0.60	-0.1
1,430,490	+		IAI47_06845	0.60	+0.3
1,430,490	+		IAI47_06845	0.60	+0.5
1,430,491	-		IAI47_06845	0.61	+0.1
1,430,491	-		IAI47_06845	0.61	-1.0
1,430,491	-		IAI47_06845	0.61	-0.3
1,430,491	-		IAI47_06845	0.61	+1.1
1,430,491	-		IAI47_06845	0.61	+1.5
1,430,491	-		IAI47_06845	0.61	+1.6
1,430,491	-		IAI47_06845	0.61	-0.5
1,430,492	+		IAI47_06845	0.61	-0.2
1,430,492	+		IAI47_06845	0.61	+0.5
1,430,493	-		IAI47_06845	0.61	-0.0
1,430,493	-		IAI47_06845	0.61	-0.6
1,430,493	-		IAI47_06845	0.61	+0.1
1,430,493	-		IAI47_06845	0.61	-0.6
1,430,520	-		IAI47_06845	0.63	+0.5
1,430,520	-		IAI47_06845	0.63	+1.4
1,430,526	+		IAI47_06845	0.63	-1.0
1,430,526	+		IAI47_06845	0.63	+1.9
1,430,527	-		IAI47_06845	0.63	+0.2
1,430,594	+		IAI47_06845	0.68	+0.7
1,430,606	-		IAI47_06845	0.69	-0.3
1,430,606	-		IAI47_06845	0.69	-0.6
1,430,657	-		IAI47_06845	0.73	-0.5
1,430,736	+		IAI47_06845	0.78	+0.8
1,430,736	+		IAI47_06845	0.78	-1.1
1,430,736	+		IAI47_06845	0.78	-0.8
1,430,737	-		IAI47_06845	0.78	+0.1
1,430,737	-		IAI47_06845	0.78	-0.1
1,430,737	-		IAI47_06845	0.78	+2.1
1,430,737	-		IAI47_06845	0.78	+0.1
1,430,737	-		IAI47_06845	0.78	-0.2
1,430,802	+		IAI47_06845	0.83	-0.8
1,430,813	-		IAI47_06845	0.84	-0.0
1,430,813	-		IAI47_06845	0.84	-0.3
1,430,813	-		IAI47_06845	0.84	-1.4
1,430,850	-		IAI47_06845	0.86	-2.0
1,430,851	+		IAI47_06845	0.87	-0.6
1,430,934	+				+0.6
1,430,934	+				-1.9
1,430,935	-				-0.0
1,430,935	-				-1.3
1,430,936	+				-0.3
1,430,954	+				+2.1
1,430,955	-				+2.0
1,430,972	+				-0.4
1,430,984	+				-0.6
1,430,998	+				-1.1
1,431,059	+				-1.0
1,431,059	+				-0.2
1,431,059	+				+0.7
1,431,059	+				+1.2
1,431,059	+				+0.3
1,431,059	+				-1.1
1,431,059	+				+0.5
1,431,059	+				+0.0
1,431,059	+				-1.0
1,431,059	+				-2.6
1,431,060	-				-0.2
1,431,060	-				-0.8
1,431,060	-				-2.1
1,431,060	-				+0.4
1,431,060	-				+0.3
1,431,060	-				+0.5
1,431,060	-				+1.8
1,431,060	-				+0.6
1,431,060	-				+0.5
1,431,091	+				-0.2
1,431,117	+				+0.7
1,431,117	+				-0.3
1,431,159	-				-1.6
1,431,216	+				+0.1
1,431,217	-				+0.5
1,431,217	-				-1.0
1,431,217	-				-0.6
1,431,267	+		IAI47_06850	0.16	-0.5
1,431,267	+		IAI47_06850	0.16	+1.5
1,431,267	+		IAI47_06850	0.16	-1.0
1,431,311	+		IAI47_06850	0.22	-0.5
1,431,311	+		IAI47_06850	0.22	+0.2
1,431,311	+		IAI47_06850	0.22	-1.7
1,431,311	+		IAI47_06850	0.22	+2.4
1,431,311	+		IAI47_06850	0.22	+0.2
1,431,311	+		IAI47_06850	0.22	-0.1
1,431,312	-		IAI47_06850	0.22	-0.1
1,431,312	-		IAI47_06850	0.22	+0.1
1,431,312	-		IAI47_06850	0.22	+1.0
1,431,312	-		IAI47_06850	0.22	+0.7
1,431,397	+		IAI47_06850	0.34	-0.5
1,431,398	-		IAI47_06850	0.34	-1.2
1,431,554	+		IAI47_06850	0.56	+0.7
1,431,554	+		IAI47_06850	0.56	+0.5
1,431,554	+		IAI47_06850	0.56	-1.3
1,431,554	+		IAI47_06850	0.56	-2.2
1,431,554	+		IAI47_06850	0.56	-0.4
1,431,554	+		IAI47_06850	0.56	+2.7
1,431,554	+		IAI47_06850	0.56	+0.7
1,431,554	+		IAI47_06850	0.56	-0.1
1,431,554	+		IAI47_06850	0.56	+1.7
1,431,555	-		IAI47_06850	0.56	-0.7
1,431,555	-		IAI47_06850	0.56	+0.3
1,431,555	-		IAI47_06850	0.56	-0.3
1,431,555	-		IAI47_06850	0.56	-0.9
1,431,555	-		IAI47_06850	0.56	+2.2
1,431,574	+		IAI47_06850	0.59	-0.1
1,431,575	-		IAI47_06850	0.59	+0.2
1,431,575	-		IAI47_06850	0.59	-0.5
1,431,604	-		IAI47_06850	0.63	-0.8
1,431,618	+		IAI47_06850	0.65	+1.5
1,431,622	-		IAI47_06850	0.66	+1.4
1,431,689	-		IAI47_06850	0.75	-0.6
1,431,728	+		IAI47_06850	0.81	+0.9
1,431,728	+		IAI47_06850	0.81	-1.4
1,431,728	+		IAI47_06850	0.81	-1.5
1,431,728	+		IAI47_06850	0.81	+1.0
1,431,729	-		IAI47_06850	0.81	-2.3
1,431,729	-		IAI47_06850	0.81	+0.8
1,431,766	-		IAI47_06850	0.86	+0.1
1,431,770	+		IAI47_06850	0.87	-0.4
1,431,771	-		IAI47_06850	0.87	+1.3
1,431,771	-		IAI47_06850	0.87	-1.6
1,431,771	-		IAI47_06850	0.87	+0.3
1,431,771	-		IAI47_06850	0.87	+1.3
1,431,788	+		IAI47_06850	0.89	-1.4
1,431,788	+		IAI47_06850	0.89	-1.0
1,431,789	-		IAI47_06850	0.89	+1.6
1,431,864	+				-0.3
1,431,864	+				+0.1
1,431,864	+				-0.2
1,431,865	-				-0.3
1,431,865	-				+0.3
1,431,865	-				+1.6
1,431,865	-				-0.6
1,431,865	-				+0.8
1,431,865	-				-0.0
1,431,872	+				+1.7
1,431,872	+				-2.1
1,431,873	-				-0.8
1,431,887	+				+0.7
1,431,887	+				+0.8
1,431,887	+				-0.7
1,431,887	+				+0.5
1,431,887	+				-0.8
1,431,887	+				-0.3
1,431,888	-				-0.2
1,431,888	-				+0.1
1,431,888	-				-0.5
1,431,898	+				-1.2
1,431,920	-				+0.0
1,432,121	+		IAI47_06855	0.18	-0.6
1,432,122	-		IAI47_06855	0.18	+0.2
1,432,161	-		IAI47_06855	0.21	-1.1
1,432,192	+		IAI47_06855	0.23	-1.1
1,432,192	+		IAI47_06855	0.23	+0.3
1,432,192	+		IAI47_06855	0.23	+0.8
1,432,192	+		IAI47_06855	0.23	-0.4
1,432,192	+		IAI47_06855	0.23	+0.5
1,432,193	-		IAI47_06855	0.23	-1.0
1,432,193	-		IAI47_06855	0.23	-1.2
1,432,193	-		IAI47_06855	0.23	+0.9
1,432,193	-		IAI47_06855	0.23	+0.2
1,432,275	-		IAI47_06855	0.29	-1.1
1,432,530	+		IAI47_06855	0.47	+0.7
1,432,531	-		IAI47_06855	0.48	+0.7
1,432,582	-		IAI47_06855	0.51	+1.1
1,432,743	+		IAI47_06855	0.63	+1.3
1,432,792	-		IAI47_06855	0.66	+0.5
1,432,794	+		IAI47_06855	0.66	-0.6
1,432,794	+		IAI47_06855	0.66	+0.6
1,432,795	-		IAI47_06855	0.67	+1.4
1,432,851	+		IAI47_06855	0.71	-1.1
1,432,851	+		IAI47_06855	0.71	-1.2
1,432,851	+		IAI47_06855	0.71	+0.4
1,432,852	-		IAI47_06855	0.71	-1.4
1,432,852	-		IAI47_06855	0.71	+0.3