Strain Fitness in Pantoea sp. MT58 around IAI47_05630

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,182,909	-		IAI47_05625	0.42	-0.7
1,182,909	-		IAI47_05625	0.42	-0.7
1,182,909	-		IAI47_05625	0.42	+0.0
1,182,909	-		IAI47_05625	0.42	-0.1
1,182,909	-		IAI47_05625	0.42	-0.2
1,182,921	+		IAI47_05625	0.43	-1.1
1,182,921	+		IAI47_05625	0.43	-1.9
1,182,921	+		IAI47_05625	0.43	-0.8
1,182,921	+		IAI47_05625	0.43	-1.5
1,182,922	-		IAI47_05625	0.43	-1.5
1,182,956	+		IAI47_05625	0.46	-0.2
1,182,957	-		IAI47_05625	0.46	-0.4
1,182,970	+		IAI47_05625	0.47	-0.6
1,182,970	+		IAI47_05625	0.47	-1.0
1,182,999	+		IAI47_05625	0.50	+1.3
1,182,999	+		IAI47_05625	0.50	-0.7
1,183,000	-		IAI47_05625	0.50	+0.6
1,183,000	-		IAI47_05625	0.50	-0.1
1,183,000	-		IAI47_05625	0.50	+0.4
1,183,000	-		IAI47_05625	0.50	+1.3
1,183,014	+		IAI47_05625	0.51	+0.8
1,183,014	+		IAI47_05625	0.51	-2.0
1,183,014	+		IAI47_05625	0.51	-0.0
1,183,014	+		IAI47_05625	0.51	-1.3
1,183,014	+		IAI47_05625	0.51	-1.9
1,183,014	+		IAI47_05625	0.51	-0.3
1,183,014	+		IAI47_05625	0.51	+0.3
1,183,015	-		IAI47_05625	0.51	+0.8
1,183,155	+		IAI47_05625	0.62	+3.3
1,183,178	+		IAI47_05625	0.64	+0.0
1,183,178	+		IAI47_05625	0.64	-0.1
1,183,178	+		IAI47_05625	0.64	-1.5
1,183,179	-		IAI47_05625	0.64	+0.5
1,183,179	-		IAI47_05625	0.64	-0.2
1,183,179	-		IAI47_05625	0.64	-0.1
1,183,239	+		IAI47_05625	0.69	-0.1
1,183,239	+		IAI47_05625	0.69	-0.0
1,183,256	+		IAI47_05625	0.70	-1.4
1,183,257	-		IAI47_05625	0.71	-0.3
1,183,318	-		IAI47_05625	0.76	+0.8
1,183,357	+		IAI47_05625	0.79	-1.3
1,183,357	+		IAI47_05625	0.79	-1.1
1,183,357	+		IAI47_05625	0.79	+1.5
1,183,357	+		IAI47_05625	0.79	-1.0
1,183,358	-		IAI47_05625	0.79	-0.4
1,183,358	-		IAI47_05625	0.79	+0.3
1,183,358	-		IAI47_05625	0.79	+0.6
1,183,358	-		IAI47_05625	0.79	-0.6
1,183,384	+		IAI47_05625	0.81	+1.3
1,183,384	+		IAI47_05625	0.81	-2.1
1,183,385	-		IAI47_05625	0.81	+0.5
1,183,407	+		IAI47_05625	0.83	-0.1
1,183,439	-		IAI47_05625	0.85	+0.8
1,183,510	-				+1.1
1,183,526	+				-0.3
1,183,526	+				-0.4
1,183,527	-				+1.3
1,183,527	-				+1.0
1,183,527	-				+0.1
1,183,555	+				+0.0
1,183,555	+				-0.6
1,183,572	+				-1.1
1,183,572	+				-0.5
1,183,573	-				+0.4
1,183,573	-				-0.2
1,183,573	-				-0.3
1,183,573	-				+0.2
1,183,573	-				-2.2
1,183,573	-				-0.4
1,183,592	+				+0.2
1,183,592	+				-0.0
1,183,592	+				-0.6
1,183,593	-				+0.9
1,183,593	-				+0.1
1,183,593	-				+0.4
1,183,661	+				+0.4
1,183,661	+				-0.4
1,183,662	-				+0.4
1,183,686	+				+0.7
1,183,686	+				+0.1
1,183,686	+				-0.9
1,183,687	-				-0.5
1,183,687	-				-2.0
1,183,687	-				-1.4
1,183,689	+				+0.4
1,183,689	+				+0.2
1,183,689	+				-0.2
1,183,689	+				+0.4
1,183,689	+				-0.1
1,183,690	-				-0.0
1,183,690	-				-0.7
1,183,701	+				+0.2
1,183,701	+				-0.5
1,183,701	+				+0.7
1,183,701	+				+0.3
1,183,701	+				+0.9
1,183,701	+				+0.3
1,183,737	+				-1.1
1,183,737	+				+0.1
1,183,786	-				+0.9
1,183,786	-				+1.1
1,183,792	+				-1.7
1,183,809	+				-0.7
1,183,809	+				+0.5
1,183,809	+				+0.1
1,183,809	+				-0.4
1,183,809	+				-0.3
1,183,809	+				-0.7
1,183,809	+				+0.1
1,183,810	-				+0.1
1,183,810	-				+0.8
1,183,810	-				+0.6
1,183,810	-				-0.8
1,183,815	+				-2.1
1,183,815	+				-0.1
1,183,816	-				+0.2
1,183,819	+				-0.3
1,183,826	-				-1.1
1,183,830	+				+0.4
1,183,830	+				+0.2
1,183,831	-				-1.0
1,183,872	-				-1.5
1,183,884	+				+1.5
1,183,884	+				+0.8
1,183,884	+				+1.4
1,183,884	+				-0.8
1,183,884	+				+0.1
1,183,884	+				+0.9
1,183,884	+				+1.8
1,183,885	-				+0.7
1,183,885	-				+0.7
1,183,895	+				+0.3
1,183,895	+				-0.5
1,183,896	-				+0.1
1,183,908	+				-0.5
1,183,908	+				-1.1
1,183,924	+				-1.0
1,183,924	+				-2.2
1,183,924	+				-1.7
1,183,924	+				+1.6
1,183,924	+				+0.3
1,183,924	+				+0.5
1,183,924	+				-0.9
1,183,924	+				-0.0
1,183,924	+				+1.1
1,183,924	+				-0.9
1,183,925	-				-0.3
1,183,925	-				+0.1
1,183,925	-				+0.7
1,183,925	-				-2.0
1,183,925	-				-1.3
1,183,925	-				-1.3
1,183,925	-				+0.8
1,183,925	-				+0.8
1,183,925	-				+0.9
1,183,925	-				+0.3
1,183,935	+		IAI47_05630	0.11	-0.4
1,183,935	+		IAI47_05630	0.11	+0.1
1,183,990	-		IAI47_05630	0.35	+0.2
1,183,990	-		IAI47_05630	0.35	-0.8
1,184,056	-		IAI47_05630	0.63	-0.5
1,184,081	-		IAI47_05630	0.74	-1.3
1,184,095	-		IAI47_05630	0.79	+0.4
1,184,184	+				-0.0
1,184,184	+				+1.1
1,184,184	+				-1.9
1,184,185	-				+0.4
1,184,185	-				-2.2
1,184,185	-				-2.5
1,184,283	-		IAI47_05635	0.12	+0.6
1,184,337	+		IAI47_05635	0.18	-0.4
1,184,337	+		IAI47_05635	0.18	+0.8
1,184,337	+		IAI47_05635	0.18	+0.5
1,184,337	+		IAI47_05635	0.18	-0.3
1,184,337	+		IAI47_05635	0.18	+0.5
1,184,337	+		IAI47_05635	0.18	-0.4
1,184,337	+		IAI47_05635	0.18	+0.0
1,184,337	+		IAI47_05635	0.18	+0.9
1,184,337	+		IAI47_05635	0.18	-1.1
1,184,337	+		IAI47_05635	0.18	-0.4
1,184,337	+		IAI47_05635	0.18	-0.2
1,184,337	+		IAI47_05635	0.18	+0.1
1,184,337	+		IAI47_05635	0.18	+0.3
1,184,337	+		IAI47_05635	0.18	-0.4
1,184,338	-		IAI47_05635	0.18	-2.7
1,184,338	-		IAI47_05635	0.18	-0.9
1,184,338	-		IAI47_05635	0.18	-0.5
1,184,338	-		IAI47_05635	0.18	-1.7
1,184,338	-		IAI47_05635	0.18	+0.2
1,184,338	-		IAI47_05635	0.18	-0.1
1,184,338	-		IAI47_05635	0.18	-1.1
1,184,338	-		IAI47_05635	0.18	+0.0
1,184,338	-		IAI47_05635	0.18	-0.8
1,184,338	-		IAI47_05635	0.18	+1.5
1,184,338	-		IAI47_05635	0.18	-0.2
1,184,338	-		IAI47_05635	0.18	+1.0
1,184,338	-		IAI47_05635	0.18	+1.9
1,184,338	-		IAI47_05635	0.18	-0.0
1,184,338	-		IAI47_05635	0.18	+1.4
1,184,338	-		IAI47_05635	0.18	+1.9
1,184,338	-		IAI47_05635	0.18	-0.5
1,184,338	-		IAI47_05635	0.18	+0.6
1,184,338	-		IAI47_05635	0.18	-2.0
1,184,338	-		IAI47_05635	0.18	-0.1
1,184,339	+		IAI47_05635	0.18	+0.9
1,184,339	+		IAI47_05635	0.18	+0.9
1,184,339	+		IAI47_05635	0.18	+1.4
1,184,340	-		IAI47_05635	0.18	-0.3
1,184,340	-		IAI47_05635	0.18	-0.2
1,184,340	-		IAI47_05635	0.18	+0.3
1,184,376	+		IAI47_05635	0.22	-0.7
1,184,376	+		IAI47_05635	0.22	+0.0
1,184,377	-		IAI47_05635	0.22	+0.9
1,184,377	-		IAI47_05635	0.22	+1.9
1,184,395	+		IAI47_05635	0.24	-2.6
1,184,407	+		IAI47_05635	0.25	-0.6
1,184,408	-		IAI47_05635	0.25	-0.5
1,184,408	-		IAI47_05635	0.25	-0.2
1,184,420	+		IAI47_05635	0.27	-0.5
1,184,420	+		IAI47_05635	0.27	-0.3
1,184,420	+		IAI47_05635	0.27	-0.3
1,184,420	+		IAI47_05635	0.27	-0.3
1,184,420	+		IAI47_05635	0.27	-0.5
1,184,421	-		IAI47_05635	0.27	-1.0
1,184,421	-		IAI47_05635	0.27	-0.3
1,184,421	-		IAI47_05635	0.27	+0.1
1,184,421	-		IAI47_05635	0.27	-0.5
1,184,425	+		IAI47_05635	0.27	-0.3
1,184,426	-		IAI47_05635	0.27	+0.8
1,184,426	-		IAI47_05635	0.27	+0.2
1,184,445	+		IAI47_05635	0.30	+0.8
1,184,446	-		IAI47_05635	0.30	-0.0
1,184,510	+		IAI47_05635	0.37	-0.1
1,184,510	+		IAI47_05635	0.37	-0.1
1,184,510	+		IAI47_05635	0.37	+1.2
1,184,510	+		IAI47_05635	0.37	+0.3
1,184,511	-		IAI47_05635	0.37	-1.0
1,184,511	-		IAI47_05635	0.37	+0.1
1,184,511	-		IAI47_05635	0.37	-1.3
1,184,511	-		IAI47_05635	0.37	+0.9
1,184,511	-		IAI47_05635	0.37	+0.9
1,184,511	-		IAI47_05635	0.37	-0.6
1,184,511	-		IAI47_05635	0.37	+0.5
1,184,511	-		IAI47_05635	0.37	+0.5
1,184,512	+		IAI47_05635	0.37	-0.2
1,184,512	+		IAI47_05635	0.37	-1.6
1,184,512	+		IAI47_05635	0.37	-0.1
1,184,512	+		IAI47_05635	0.37	+0.7
1,184,512	+		IAI47_05635	0.37	+1.1
1,184,513	-		IAI47_05635	0.37	+0.6
1,184,513	-		IAI47_05635	0.37	-0.1
1,184,513	-		IAI47_05635	0.37	+0.8
1,184,522	+		IAI47_05635	0.38	-0.4
1,184,522	+		IAI47_05635	0.38	-0.4
1,184,523	-		IAI47_05635	0.38	+1.1
1,184,523	-		IAI47_05635	0.38	+0.9
1,184,529	+		IAI47_05635	0.39	-0.3
1,184,529	+		IAI47_05635	0.39	+0.1
1,184,529	+		IAI47_05635	0.39	+0.2
1,184,529	+		IAI47_05635	0.39	+0.6
1,184,529	+		IAI47_05635	0.39	+0.1
1,184,529	+		IAI47_05635	0.39	-0.3
1,184,529	+		IAI47_05635	0.39	-0.5
1,184,530	-		IAI47_05635	0.39	+0.6
1,184,530	-		IAI47_05635	0.39	-1.2
1,184,530	-		IAI47_05635	0.39	+0.0
1,184,530	-		IAI47_05635	0.39	-1.5
1,184,530	-		IAI47_05635	0.39	+1.2
1,184,539	+		IAI47_05635	0.40	+1.1
1,184,540	-		IAI47_05635	0.40	-1.2
1,184,540	-		IAI47_05635	0.40	-0.5
1,184,577	+		IAI47_05635	0.44	+0.2
1,184,577	+		IAI47_05635	0.44	-0.9
1,184,578	-		IAI47_05635	0.44	-0.7
1,184,629	+		IAI47_05635	0.50	+1.7
1,184,630	-		IAI47_05635	0.50	+1.7
1,184,746	+		IAI47_05635	0.63	-0.0
1,184,746	+		IAI47_05635	0.63	+2.7
1,184,747	-		IAI47_05635	0.63	-0.8
1,184,754	+		IAI47_05635	0.64	+0.7
1,184,754	+		IAI47_05635	0.64	-0.4
1,184,754	+		IAI47_05635	0.64	+0.2
1,184,754	+		IAI47_05635	0.64	-0.9
1,184,754	+		IAI47_05635	0.64	+0.5
1,184,754	+		IAI47_05635	0.64	-3.0
1,184,754	+		IAI47_05635	0.64	-0.4
1,184,754	+		IAI47_05635	0.64	+0.1
1,184,754	+		IAI47_05635	0.64	+0.7
1,184,754	+		IAI47_05635	0.64	+1.2
1,184,755	-		IAI47_05635	0.64	-0.1
1,184,755	-		IAI47_05635	0.64	-0.1
1,184,755	-		IAI47_05635	0.64	-0.9
1,184,757	+		IAI47_05635	0.64	-0.0
1,184,757	+		IAI47_05635	0.64	-0.2
1,184,757	+		IAI47_05635	0.64	-1.1
1,184,757	+		IAI47_05635	0.64	+2.6
1,184,758	-		IAI47_05635	0.64	-0.3
1,184,758	-		IAI47_05635	0.64	-2.8
1,184,758	-		IAI47_05635	0.64	-1.6
1,184,767	-		IAI47_05635	0.65	-0.6
1,184,767	-		IAI47_05635	0.65	-1.6
1,184,767	-		IAI47_05635	0.65	+1.1
1,184,768	+		IAI47_05635	0.65	+0.0
1,184,768	+		IAI47_05635	0.65	+0.0
1,184,768	+		IAI47_05635	0.65	+2.5
1,184,768	+		IAI47_05635	0.65	-0.4
1,184,768	+		IAI47_05635	0.65	+1.4
1,184,768	+		IAI47_05635	0.65	+0.1
1,184,768	+		IAI47_05635	0.65	-1.0
1,184,768	+		IAI47_05635	0.65	-1.5
1,184,768	+		IAI47_05635	0.65	-0.6
1,184,768	+		IAI47_05635	0.65	+0.4
1,184,768	+		IAI47_05635	0.65	-1.0
1,184,768	+		IAI47_05635	0.65	+1.7
1,184,768	+		IAI47_05635	0.65	+2.9
1,184,768	+		IAI47_05635	0.65	+1.2
1,184,768	+		IAI47_05635	0.65	-0.4
1,184,768	+		IAI47_05635	0.65	-1.0
1,184,768	+		IAI47_05635	0.65	+0.1
1,184,768	+		IAI47_05635	0.65	-0.2
1,184,769	-		IAI47_05635	0.66	+0.7
1,184,769	-		IAI47_05635	0.66	+0.5
1,184,769	-		IAI47_05635	0.66	+0.6
1,184,769	-		IAI47_05635	0.66	-2.4
1,184,769	-		IAI47_05635	0.66	-0.6
1,184,769	-		IAI47_05635	0.66	-0.4
1,184,769	-		IAI47_05635	0.66	-2.0
1,184,769	-		IAI47_05635	0.66	+0.4
1,184,769	-		IAI47_05635	0.66	+1.2
1,184,769	-		IAI47_05635	0.66	-1.2
1,184,769	-		IAI47_05635	0.66	+2.1
1,184,769	-		IAI47_05635	0.66	+0.2
1,184,769	-		IAI47_05635	0.66	-1.3
1,184,769	-		IAI47_05635	0.66	+0.2
1,184,769	-		IAI47_05635	0.66	-0.4
1,184,814	+		IAI47_05635	0.71	-0.1
1,184,814	+		IAI47_05635	0.71	+0.5
1,184,814	+		IAI47_05635	0.71	-1.0
1,184,815	-		IAI47_05635	0.71	+1.4
1,184,815	-		IAI47_05635	0.71	+1.5
1,184,816	+		IAI47_05635	0.71	+0.1
1,184,817	-		IAI47_05635	0.71	+0.4
1,184,817	-		IAI47_05635	0.71	+1.4
1,184,828	+		IAI47_05635	0.72	+0.8
1,184,828	+		IAI47_05635	0.72	-0.4
1,184,828	+		IAI47_05635	0.72	+1.0
1,184,828	+		IAI47_05635	0.72	+2.3
1,184,831	+		IAI47_05635	0.72	+0.2
1,184,832	-		IAI47_05635	0.73	+0.6
1,184,832	-		IAI47_05635	0.73	-1.5
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