Strain Fitness in Pantoea sp. MT58 around IAI47_13360

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,827,362	+		IAI47_13355	0.26	-0.2
2,827,401	-		IAI47_13355	0.31	+1.8
2,827,402	+		IAI47_13355	0.31	-0.3
2,827,403	-		IAI47_13355	0.31	-0.8
2,827,416	-		IAI47_13355	0.33	-0.6
2,827,416	-		IAI47_13355	0.33	+0.2
2,827,425	+		IAI47_13355	0.34	-0.4
2,827,436	-		IAI47_13355	0.35	-0.6
2,827,436	-		IAI47_13355	0.35	+0.3
2,827,509	+		IAI47_13355	0.43	+0.4
2,827,509	+		IAI47_13355	0.43	-0.1
2,827,509	+		IAI47_13355	0.43	-1.0
2,827,510	-		IAI47_13355	0.43	+1.5
2,827,510	-		IAI47_13355	0.43	-0.2
2,827,522	+		IAI47_13355	0.45	-1.3
2,827,522	+		IAI47_13355	0.45	-2.1
2,827,522	+		IAI47_13355	0.45	+1.1
2,827,522	+		IAI47_13355	0.45	-1.5
2,827,523	-		IAI47_13355	0.45	+3.0
2,827,552	+		IAI47_13355	0.48	+2.5
2,827,552	+		IAI47_13355	0.48	-0.2
2,827,552	+		IAI47_13355	0.48	+1.5
2,827,552	+		IAI47_13355	0.48	+2.0
2,827,552	+		IAI47_13355	0.48	+3.8
2,827,552	+		IAI47_13355	0.48	+0.8
2,827,553	-		IAI47_13355	0.48	+0.5
2,827,553	-		IAI47_13355	0.48	-0.5
2,827,553	-		IAI47_13355	0.48	+0.7
2,827,553	-		IAI47_13355	0.48	+1.5
2,827,557	-		IAI47_13355	0.49	+1.4
2,827,575	+		IAI47_13355	0.51	+2.2
2,827,576	-		IAI47_13355	0.51	-0.0
2,827,576	-		IAI47_13355	0.51	-0.4
2,827,576	-		IAI47_13355	0.51	-0.0
2,827,603	+		IAI47_13355	0.54	-2.6
2,827,603	+		IAI47_13355	0.54	-1.6
2,827,608	+		IAI47_13355	0.54	+1.7
2,827,608	+		IAI47_13355	0.54	+0.4
2,827,608	+		IAI47_13355	0.54	+2.5
2,827,608	+		IAI47_13355	0.54	-0.2
2,827,608	+		IAI47_13355	0.54	-1.2
2,827,608	+		IAI47_13355	0.54	+0.9
2,827,608	+		IAI47_13355	0.54	-0.2
2,827,608	+		IAI47_13355	0.54	+0.3
2,827,608	+		IAI47_13355	0.54	+1.3
2,827,608	+		IAI47_13355	0.54	-0.5
2,827,608	+		IAI47_13355	0.54	+0.3
2,827,608	+		IAI47_13355	0.54	-0.1
2,827,609	-		IAI47_13355	0.54	-0.2
2,827,609	-		IAI47_13355	0.54	-1.6
2,827,609	-		IAI47_13355	0.54	+1.2
2,827,609	-		IAI47_13355	0.54	+1.5
2,827,609	-		IAI47_13355	0.54	-1.0
2,827,609	-		IAI47_13355	0.54	+0.7
2,827,612	+		IAI47_13355	0.55	-0.9
2,827,612	+		IAI47_13355	0.55	+0.3
2,827,612	+		IAI47_13355	0.55	+0.8
2,827,613	-		IAI47_13355	0.55	-0.3
2,827,614	+		IAI47_13355	0.55	-0.7
2,827,614	+		IAI47_13355	0.55	-0.1
2,827,615	-		IAI47_13355	0.55	-0.2
2,827,615	-		IAI47_13355	0.55	-0.2
2,827,615	-		IAI47_13355	0.55	+0.3
2,827,618	+		IAI47_13355	0.56	+0.4
2,827,619	-		IAI47_13355	0.56	+0.1
2,827,619	-		IAI47_13355	0.56	+1.9
2,827,619	-		IAI47_13355	0.56	-0.3
2,827,689	+		IAI47_13355	0.64	+1.6
2,827,690	-		IAI47_13355	0.64	-1.0
2,827,699	-		IAI47_13355	0.65	+1.2
2,827,708	+		IAI47_13355	0.66	+1.0
2,827,709	-		IAI47_13355	0.66	-1.1
2,827,735	+		IAI47_13355	0.69	-1.7
2,827,736	-		IAI47_13355	0.69	-0.5
2,827,736	-		IAI47_13355	0.69	-0.6
2,827,736	-		IAI47_13355	0.69	+0.5
2,827,746	-		IAI47_13355	0.70	-0.2
2,827,746	-		IAI47_13355	0.70	-0.9
2,827,791	-		IAI47_13355	0.75	-1.0
2,828,320	+				+0.7
2,828,322	+				+1.1
2,828,323	-				-1.3
2,828,401	+				-1.0
2,828,402	-				+0.9
2,828,412	+		IAI47_13360	0.10	-0.1
2,828,480	+		IAI47_13360	0.18	+1.1
2,828,481	-		IAI47_13360	0.18	+0.3
2,828,559	+		IAI47_13360	0.26	+1.2
2,828,624	+		IAI47_13360	0.33	+0.8
2,828,672	+		IAI47_13360	0.38	-0.8
2,828,672	+		IAI47_13360	0.38	+0.7
2,828,673	-		IAI47_13360	0.38	-1.4
2,828,673	-		IAI47_13360	0.38	+0.8
2,828,674	+		IAI47_13360	0.38	-0.0
2,828,695	+		IAI47_13360	0.41	-0.1
2,828,719	-		IAI47_13360	0.43	+0.5
2,828,747	+		IAI47_13360	0.46	-2.1
2,828,747	+		IAI47_13360	0.46	+0.6
2,828,748	-		IAI47_13360	0.46	+0.2
2,828,749	+		IAI47_13360	0.46	+1.9
2,828,749	+		IAI47_13360	0.46	-1.7
2,828,749	+		IAI47_13360	0.46	+1.5
2,828,749	+		IAI47_13360	0.46	+1.4
2,828,749	+		IAI47_13360	0.46	+1.2
2,828,750	-		IAI47_13360	0.47	+1.2
2,828,750	-		IAI47_13360	0.47	-0.2
2,828,750	-		IAI47_13360	0.47	+0.2
2,828,750	-		IAI47_13360	0.47	-0.9
2,828,750	-		IAI47_13360	0.47	-0.7
2,828,750	-		IAI47_13360	0.47	+0.6
2,828,750	-		IAI47_13360	0.47	-0.2
2,828,779	+		IAI47_13360	0.50	-0.7
2,828,779	+		IAI47_13360	0.50	+1.2
2,828,779	+		IAI47_13360	0.50	-0.6
2,828,780	-		IAI47_13360	0.50	-1.6
2,828,780	-		IAI47_13360	0.50	-0.1
2,828,780	-		IAI47_13360	0.50	-2.6
2,828,780	-		IAI47_13360	0.50	+1.1
2,828,780	-		IAI47_13360	0.50	+1.6
2,828,780	-		IAI47_13360	0.50	-1.1
2,828,780	-		IAI47_13360	0.50	-0.8
2,828,780	-		IAI47_13360	0.50	+1.4
2,828,781	+		IAI47_13360	0.50	-1.2
2,828,781	+		IAI47_13360	0.50	+1.0
2,828,781	+		IAI47_13360	0.50	-1.7
2,828,781	+		IAI47_13360	0.50	-0.2
2,828,782	-		IAI47_13360	0.50	-0.0
2,828,782	-		IAI47_13360	0.50	+0.3
2,828,793	+		IAI47_13360	0.51	-1.0
2,828,793	+		IAI47_13360	0.51	-1.0
2,828,793	+		IAI47_13360	0.51	-1.8
2,828,794	-		IAI47_13360	0.51	-0.9
2,828,805	-		IAI47_13360	0.52	-1.0
2,828,813	+		IAI47_13360	0.53	-2.2
2,828,814	-		IAI47_13360	0.53	-0.0
2,828,865	+		IAI47_13360	0.59	+1.3
2,828,865	+		IAI47_13360	0.59	+1.0
2,828,866	-		IAI47_13360	0.59	+1.4
2,828,866	-		IAI47_13360	0.59	+0.6
2,828,867	+		IAI47_13360	0.59	-0.2
2,828,873	+		IAI47_13360	0.60	+2.1
2,828,873	+		IAI47_13360	0.60	-0.4
2,828,874	-		IAI47_13360	0.60	-1.8
2,828,874	-		IAI47_13360	0.60	+0.9
2,828,876	+		IAI47_13360	0.60	+1.5
2,828,876	+		IAI47_13360	0.60	+1.3
2,828,876	+		IAI47_13360	0.60	-0.6
2,828,876	+		IAI47_13360	0.60	-2.1
2,828,876	+		IAI47_13360	0.60	+0.2
2,828,877	-		IAI47_13360	0.60	+2.0
2,828,921	-		IAI47_13360	0.65	+0.9
2,828,940	-		IAI47_13360	0.67	+1.3
2,829,036	+		IAI47_13360	0.77	+1.0
2,829,036	+		IAI47_13360	0.77	+0.0
2,829,036	+		IAI47_13360	0.77	-0.2
2,829,041	+		IAI47_13360	0.78	+0.3
2,829,041	+		IAI47_13360	0.78	-0.3
2,829,041	+		IAI47_13360	0.78	+1.1
2,829,042	-		IAI47_13360	0.78	+0.7
2,829,095	+		IAI47_13360	0.83	+0.1
2,829,095	+		IAI47_13360	0.83	+0.5
2,829,095	+		IAI47_13360	0.83	-2.1
2,829,126	+		IAI47_13360	0.87	-1.3
2,829,126	+		IAI47_13360	0.87	-0.3
2,829,127	-		IAI47_13360	0.87	+0.6
2,829,153	+		IAI47_13360	0.90	-0.7
2,829,153	+		IAI47_13360	0.90	+0.2
2,829,153	+		IAI47_13360	0.90	-1.5
2,829,154	-		IAI47_13360	0.90	-0.7
2,829,179	+				+0.7
2,829,179	+				-1.0
2,829,180	-				+0.9
2,829,180	-				-2.7
2,829,200	-				+1.7
2,829,215	+				+1.0
2,829,215	+				-1.2
2,829,215	+				+0.9
2,829,216	-				+0.5
2,829,216	-				+1.8
2,829,216	-				-0.2
2,829,216	-				+2.1
2,829,216	-				+0.6
2,829,219	+				-0.7
2,829,220	-				+1.6
2,829,267	-				-1.6
2,829,280	+				-0.7
2,829,280	+				-1.2
2,829,280	+				+0.8
2,829,280	+				-0.3
2,829,280	+				-2.2
2,829,284	+				-0.2
2,829,284	+				+0.0
2,829,284	+				-0.8
2,829,284	+				+3.3
2,829,285	-				+1.0
2,829,285	-				+1.2
2,829,287	+				+0.3
2,829,287	+				-0.3
2,829,287	+				+0.8
2,829,287	+				-2.1
2,829,287	+				+0.4
2,829,287	+				-0.6
2,829,288	-				+0.2
2,829,288	-				+1.3
2,829,288	-				-1.2
2,829,288	-				-0.0
2,829,290	-				-0.6
2,829,314	+				-1.9
2,829,314	+				+0.5
2,829,315	-				+0.6
2,829,315	-				+0.6
2,829,351	+				-1.0
2,829,352	-				+0.9
2,829,368	+				-0.6
2,829,375	+				-0.4
2,829,376	-				-1.4
2,829,376	-				-0.3
2,829,376	-				+1.0
2,829,413	+				-0.3
2,829,414	-				-1.3
2,829,414	-				+0.6
2,829,423	+				+0.6
2,829,424	-				+1.5
2,829,431	+				+0.0
2,829,431	+				+0.3
2,829,431	+				-1.9
2,829,432	-				+0.3
2,829,457	+				-0.0
2,829,457	+				+0.9
2,829,457	+				+1.0
2,829,458	-				-2.9
2,829,458	-				-0.9
2,829,459	+				-1.3
2,829,459	+				-0.7
2,829,459	+				+0.5
2,829,460	-				+0.7
2,829,460	-				+0.4
2,829,473	+				-0.2
2,829,473	+				-2.2
2,829,474	-				-1.4
2,829,474	-				+0.5
2,829,474	-				-0.3
2,829,474	-				+1.3
2,829,474	-				-0.7
2,829,494	+				+0.4
2,829,494	+				-0.2
2,829,495	-				+1.3
2,829,495	-				+0.4
2,829,495	-				-1.9
2,829,495	-				-0.3
2,829,495	-				+0.5
2,829,552	-				+0.4
2,829,563	+				-0.1
2,829,563	+				+1.4
2,829,563	+				+0.2
2,829,564	-				-0.2
2,829,564	-				+1.9
2,829,569	+				-1.3
2,829,569	+				-1.2
2,829,570	-				-2.1
2,829,570	-				+0.7
2,829,570	-				-0.4
2,829,575	+				+0.3
2,829,575	+				-0.2
2,829,576	-				+0.1
2,829,598	-				-0.5
2,829,598	-				+1.4
2,829,606	-				-1.3
2,829,612	+				-1.7
2,829,612	+				-2.2
2,829,613	-				-0.7
2,829,625	+				+1.0
2,829,625	+				-1.4
2,829,625	+				-2.7
2,829,625	+				+0.4
2,829,626	-				+1.0
2,829,629	+				+1.3
2,829,640	+				+0.8
2,829,746	+				+0.5
2,829,747	-				-0.6
2,829,747	-				-0.5
2,829,791	+		IAI47_13365	0.15	-0.6
2,829,918	-		IAI47_13365	0.29	-0.4
2,829,958	+		IAI47_13365	0.34	-0.9
2,829,959	-		IAI47_13365	0.34	-0.3
2,829,959	-		IAI47_13365	0.34	-0.5
2,830,033	+		IAI47_13365	0.43	-1.2
2,830,033	+		IAI47_13365	0.43	-0.5
2,830,036	+		IAI47_13365	0.43	-1.6
2,830,036	+		IAI47_13365	0.43	+0.2
2,830,036	+		IAI47_13365	0.43	+1.6
2,830,036	+		IAI47_13365	0.43	-2.4
2,830,037	-		IAI47_13365	0.43	-0.5
2,830,037	-		IAI47_13365	0.43	-1.3
2,830,037	-		IAI47_13365	0.43	-0.7
2,830,037	-		IAI47_13365	0.43	-1.4
2,830,037	-		IAI47_13365	0.43	+0.4
2,830,075	+		IAI47_13365	0.47	-0.1
2,830,153	+		IAI47_13365	0.56	-2.3
2,830,154	-		IAI47_13365	0.56	+0.6
2,830,154	-		IAI47_13365	0.56	+1.3
2,830,154	-		IAI47_13365	0.56	-1.8
2,830,243	+		IAI47_13365	0.67	+0.3
2,830,243	+		IAI47_13365	0.67	-0.2
2,830,244	-		IAI47_13365	0.67	-0.3